KEGG   Nematolebias whitei (Rio pearlfish): 119413522
Entry
119413522         CDS       T08042                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119413522 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nwh03041]
    119413522 (cdc5l)
   03400 DNA repair and recombination proteins [BR:nwh03400]
    119413522 (cdc5l)
Spliceosome [BR:nwh03041]
 Complex B
  Other components
   Prp19 complex
    119413522 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    119413522 (cdc5l)
DNA repair and recombination proteins [BR:nwh03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    119413522 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 119413522
NCBI-ProteinID: XP_037536510
LinkDB
Position
1:complement(74357775..74381035)
AA seq 813 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEEVGDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIAVQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSMEQYDALEPNFK
RLRQQHLDGELRNEREERDRKKDKQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPSP
QISDAELEEVVKLGVASEVARQAAEESEGGNSASSTLLSEYSVANNMATGLRTPRTPAAQ
DRILQEAQNLMALTNTDTPLKGGLNTPLHESDFSGVTPQRQQIQTPNTVLSTPFRTPGPG
QGSEGMTPIAGGGMTPRSTPGLTPGPTPLRDKLNINSEEQLADPAYAKHLHKESLQQLRQ
GLMSLPVPKNDFEIVLPENAEKELEETEMETGFIEDSSDVEARKQAQRDAEREKELKLRH
TAVQRSLPRPTEVNESVLRPASMEPLSDLQVAEELIKQEMITMMHNDCLHHPSANAANAA
NQLQRGKTKGPASTSNNASHISYLETHPYKPVSTEDMEQAKVILAVEMEVVKAGMGHGDL
SLEAYTQVWEECYGQVLYLPGQNRYTRANLASKKDRIESLEKKLEVNRGHMTAEARRAAK
LEKKLKILLGGFQSRALGLLKQHNELWEQVEQAATELQTFNQLKKQEDLAIPRRHEALRE
DVDRQMERERELQQRYGELLMERESLLSSSQKY
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgataaaaggaggcgtttggcgcaacactgaggatgagatcctcaag
gcagcagtaatgaaatatgggaaaaaccagtggtcccgtattgcctccctgttgcaccgc
aagtctgccaaacagtgcaaagccagatggtacgagtggttggaccccagtatcaaaaag
acagagtggtccagagaggaggaggagaagctgcttcacttggccaagctgatgcccacc
cagtggaggaccattgctcccatcattggacgcactgctgcccagtgtctggagcactat
gaatacctgctagataaagcagcacagagagacaatgaggaagaggtgggcgatgacccc
aggaagttaaaaccaggagaaatcgacccaaaccctgagacgaaaccagccaggccagac
cctgtggacatggatgaagatgagctggagatgctgtcagaagccagagctcgtctggcc
aacactcagggcaaaaaagccaaaaggaaggccagagagaaacagttggaggaagccaga
cgactggcggctctgcagaaacgcagggagctgagagctgcaggaatagctgttcagaag
aagaggaagaaaaagaggggggtggactacaacgccgaaatcccctttgaaaagaaaccg
gcaccgggtttctatgacaccagtatggagcagtacgatgcactggagcccaactttaaa
cggctcagacagcaacatttggatggagaactacgcaatgaacgtgaggagagggacagg
aagaaggataaacagaagataaagaagaagaaagagagcgatctgccgtctgcaatcctg
cagaccagcggagtggccgagttcacaaagaaacgctccaaactggtgttaccttcacca
cagatcagcgatgccgagttagaggaggtcgttaaactgggtgttgccagtgaggtcgcc
cgccaggctgctgaagagagcgagggaggaaactctgcctcctccaccctcctgtctgag
tacagcgttgccaacaacatggcaaccggactacgaaccccacgcacccctgctgcacag
gacaggatactgcaggaagcccagaatctgatggctctgaccaatactgacacccctctg
aaaggaggcctcaacacgccgctgcacgagagcgacttcagtggagtcacgcctcagcgg
cagcagattcagacaccaaacactgttctcagtacacccttcagaactcctggacccggc
cagggctcagaaggaatgactcctatagctggaggtgggatgaccccacgcagtactcca
ggtctgaccccgggtccgacaccgctgagggacaaactgaacatcaacagtgaggagcaa
ctggctgaccctgcatacgccaaacatctgcacaaggagagtctgcagcagctgagacaa
ggcctgatgtcacttcctgtcccgaagaacgactttgagattgttcttcctgaaaatgca
gagaaagaacttgaagaaacagaaatggagacgggatttattgaagattcttcagatgta
gaggctcgcaaacaggctcagagggacgcagaaagggagaaagagttgaagctgcgacac
actgctgtgcagaggagtctcccccgacccactgaggtaaacgagtccgtccttcgtcct
gcctccatggagccgctctctgaccttcaggtggccgaggagctcatcaaacaggaaatg
atcaccatgatgcacaacgactgcctgcaccatccgtcagccaacgcagccaacgcagcc
aatcagctgcagcgtggcaaaaccaaaggccccgcctccacgtccaataacgcctcacac
atctcttacctggaaacacacccctacaaaccagtcagcacagaggacatggagcaggcg
aaggtgatcctggcagtagagatggaagtggtgaaggcaggaatgggtcatggagatctc
agcctggaggcctacactcaggtgtgggaggaatgctacggacaggtgttgtacctccct
ggtcagaacaggtacaccagagctaacctggcatcaaagaaggatcgtattgaaagcctg
gagaaaaagctagaggtgaaccgtggtcacatgacagcagaggctcgacgagcagctaag
ctggagaagaaactgaaaatccttctgggggggtttcagtccagagctctggggctcctg
aagcagcataatgagctctgggaacaggtggagcaggcagctacggagctgcagactttc
aaccagctgaagaaacaggaggatctggccattcccaggagacatgaggctctgcgggag
gacgtggacaggcagatggagagagaacgagaacttcagcagagatacggagagctgctg
atggagagggagtctctgctcagcagctcacagaaatactga

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