Nematolebias whitei (Rio pearlfish): 119413791
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Entry
119413791 CDS
T08042
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119413791 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119413791 (smarca2)
03036 Chromosome and associated proteins [BR:
nwh03036
]
119413791 (smarca2)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119413791 (smarca2)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119413791 (smarca2)
Chromatin remodeling factors
BAF complex
119413791 (smarca2)
PBAF complex
119413791 (smarca2)
GBAF(ncBAF) complex
119413791 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
PRCH
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
119413791
NCBI-ProteinID:
XP_037536783
LinkDB
All DBs
Position
8:4087917..4139523
Genome browser
AA seq
1583 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPSAGLSPGPILGPSPGPDPSPSSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDGMYPMHKPVEGTLNDKTMAEAMHFGHMKGVGMRSLHSGMGPPQSPMDQH
SQGYMSPHPSPMGLHEHASSPMSGGGGGPTPPHIPPSQSGPMMSMDPQGGMSSMGQQGRG
PSAFNPVQLQQLRAQILAYKILAREQPLPENLQLAVQGKRSLPTMQQQQQQQQQQQLPSS
ASPYRPPGMPMTSMGGPQSSPSPAPAMQVHNQSTGPKPWPDGQSADNQATAQKHLTPIPS
GRPSPAPPQTTAGPPGPMPGGSVAPHPQGQQVSPMLQMQQKQNRITPIQKPQGLDPVGIL
QEREHRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVACVRRD
TTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHAKDFK
EYHRSVSGKIQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKD
KRLAYLLQQTDEYVGNLTTLVYEHKAAQAAKDKKKKRKRKKKVDGDGEGTSAIGPDGEPM
DESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEE
EEEDEVAKTETEEKKKIDPNADKAPATDSKHIIETAKQDVDDEYSVPTDQTSLQSYYGVA
HAVIEKVEKQSTLLINGLLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY
LMELKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPGLRRGLVPQLRSGKFNV
LLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQ
NKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPF
LLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGGAKTLM
NTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIISGPDLYRASGKFELLDRILPKLQATG
HRVLLFCQMTTLMTIMEDYFGYRNFQYLRLDGTTKSEDRAMLLKKFNEEGSQYFIFLLST
RAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA
AAKYKLNVDQKVIQAGMFDQKSSSHERRVFLQAILEHEEQNEEEDEVPDDETLNQMIARN
EDEFELFMRFDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEEEKMFGR
GSRCRRDVDYSDALTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQGKDSSSRDITGMKA
KKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGSGRQLSEVFVQLPSRKELPEYYEL
IRKPVDFKKIKERVRNHKYRSLGDLEKDVMLLCQNAQTFNLEGSQIYEDSIVLQSVFKSA
RQKIAKDEVSEDDSDEDDDDDYDSEAEAKSVRVKIKLGRDGRGHDKGKKRQSRGKAKPVV
SDDDSDEDQDDNDLSDRSKSDDD
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccatcagacacatcaggtggtatgtcccatcctggtccttcaccttcggct
ggtctgtccccagggcccatcctgggccccagtcctggaccggacccttcaccgagttct
gttcacagtatgatggggcccagtcctggacctggaacacctaatgcccctcatggcatg
cagggccaaggacaaagtgactactcccaggacggcatgtatcctatgcacaagcccgtg
gaggggacactgaatgataagacgatggcagaggctatgcattttggtcacatgaaaggt
gtcgggatgagatccctccacagtggcatgggccctcctcagagtcctatggaccagcac
agccaaggatacatgtctccacacccatcccccatgggactccatgagcatgcttctagt
cccatgtcaggaggtggaggtggacctacacccccccacatccctccctcccagtcaggc
ccgatgatgtctatggatcctcaggggggcatgtccagtatgggacagcagggtcggggg
ccctctgccttcaacccggtccagctgcagcagctaagagctcagattctcgcctacaag
attctggcccgggagcaaccgctgccagaaaacctccaactcgccgttcagggcaaaagg
agtctacccacaatgcaacagcagcagcaacaacagcagcagcaacagctgccatcgagt
gccagcccatacagacctccaggtatgccaatgacatccatgggtggtcctcagtccagc
ccctctccagcaccagccatgcaagtacacaatcagagcacgggacccaaaccgtggccc
gatggtcagagtgctgacaatcaagcgactgctcagaaacacctcacccccattcccagc
ggccgcccctcccctgcacctcctcagaccaccgcggggcctcctgggcccatgccagga
ggttctgtggccccccatccccagggccagcaggtgtcccccatgctccagatgcagcag
aagcaaaaccggatcacgccgatccagaagcctcagggtctggacccagtgggaatctta
caggagagagagcacagactgcaggctcggatcgcacatcggatccaggagctggagagt
ctgccgggctccttgcctcctgacttgaggaccaaagctacagtggagctgaaggctctg
cggctgctcaacttccagcggcagctgcggcaggatgtggtggcatgcgtgagacgagac
acgaccctggagacggcgctgaactcgaaggcctaccggcgcagcaagagacaaactctg
agggaggctcgcatgacggaaaagctggagaagcagcagaaactggagcaggagaagaaa
cgcagacagaaacatcaggaatatctgaacagcattcttcagcatgctaaagacttcaaa
gagtaccaccgctcggtgtccggaaaaatccagaaactcaccagagctatcgccacctgg
cacaccaacacggagcgggagcagaagaaggagacggagaggattgagaaggagaggatg
aggaggctcatggcagaagatgaggaaggctacaggaaactgatcgaccaaaagaaagac
aagcgcttggcctacttactgcagcagacggacgagtacgtgggcaacctcaccactctg
gtgtacgaacacaaagctgctcaggctgccaaggacaagaagaagaagaggaagaggaag
aagaaggtggatggagacggtgaaggtaccagcgccatcggacctgatggagagcccatg
gatgaaagtagccaaatgagcgagctgcccgtcaaagtgattcagacggagacgggaaaa
gtcctccaggggacagatgctcccaagtccagccagctggaggcctggctggagatgaat
ccaggatatgaagtggccccgcggtcagacagcgaggaaagtggctcggagttcgaggag
gaggaagaagatgaggtggccaagaccgaaacggaggagaagaagaaaatcgatccgaat
gcagataaagcgcctgcaacggattccaaacacatcattgagacagccaagcaggacgtg
gacgacgagtacagcgttcccacggaccagaccagcttgcagtcttattatggggtggcc
cacgccgtcatcgagaaggtggagaagcagtccactctcctgatcaacggcttgctcaaa
cagtatcagatccagggtttggagtggatggtgtccctgtacaacaacaacctgaacggc
atcctggctgatgagatgggtctggggaaaaccatccaaaccatcgcgctcatcacctac
ctgatggaactcaagaggctcaacgggccctacctcatcatcgtacctctctcgacttta
tctaactgggtctacgagctggacaaatgggcgccgtctgttgtcaaaatagcttacaag
ggcactccgggtctgcgccgtggcctggtgcctcagctccgcagtgggaagttcaacgtc
ctgctgaccacctacgagtacatcatcaaagacaagcacattctggctaagattcgctgg
aagtacatgattgtggatgaaggccaccgcatgaagaaccaccactgtaagctgacccag
gtgttgaacacgcactacgtggcgccccgccgcctcctcctcaccgggacgccgctgcag
aacaagctgcccgagctgtgggcgctgctcaacttcctgctgcccaccatcttcaagagc
tgcagcaccttcgagcagtggttcaacgcgccgttcgccatgactggagaacgggttgac
cttaacgaggaggaaaccatcctgatcatccggcgcttgcacaaggtgctgcgccccttc
ctcctgcggagactcaagaaagaagtggagtctcagctgccagagaaggtggaatatgtc
atcaagtgtgacatgtctgccatccagaaggttctgtaccgtcacatgcagaaaggaatc
ctcctcacggacggctcggagaaagacaagaagggtaaaggaggcgcaaagactctgatg
aacaccatcatgcagctgaagaagatctgcaaccatccctacatgttccagcacatcgag
gaatcgtttgctgaacacttgggttatccaaacggcatcatcagcgggcctgatctgtac
agagcttctgggaagtttgagctccttgatcgcatcttaccgaagcttcaggccaccgga
cacagagtcctgctcttctgccaaatgaccacgctcatgaccatcatggaggactacttc
ggctatcgtaacttccagtatttacgtctggatggaaccaccaagtctgaggatcgagca
atgctgctgaagaaatttaacgaggaaggctcccagtacttcatcttcctcctcagcacc
agagctggaggtctcggcctcaacctgcaggctgccgacaccgtcgtcatcttcgacagc
gactggaaccctcaccaggaccttcaggcccaggatcgggctcaccgcattgggcaacag
aacgaagtccgtgtgctccgcctctgcaccgtcaacagcgtggaggagaagatcttagca
gctgccaaatacaaactgaatgtggatcagaaggtcatccaggcaggaatgtttgaccag
aaatcctcaagccacgagcgccgagttttccttcaggccattttggagcatgaagaacaa
aatgaggaggaagatgaggtaccagacgacgagacccttaaccagatgatagctcgcaat
gaagatgagtttgagctctttatgcgcttcgacatggaccgccgcagagaggacgccagg
aatccgaagcgtaagcctcgactgatggaggaagacgagctgccgtcatggatcatcaaa
gatgatgctgaggtggagcggctcacctacgaggaggaggaagagaagatgttcggtcga
ggctctcgctgtcgtcgggatgtggactacagcgatgcgctgacggagaaacagtggctt
cgggccattgaggatggaaacctggaggagatggaggaggagatccgcctgaaaaaacgc
aaacgcaaacgacgtcagggcaaagactcgtcgagtcgggacatcacaggcatgaaggcc
aagaaaagacgtggacgtccgccggcggagaagctgtcccccaatcccccgaagctcacc
aagcagatgaacaccatcatcgacaccgtgatcaactacagagacgggtcaggaagacaa
ctcagcgaagtttttgtgcagctcccgtccaggaaggaactgccagaatattacgagctg
atcagaaaacccgtggacttcaagaagattaaggaacgtgtgagaaaccataagtacagg
agtttaggagacctggagaaggacgtgatgcttctctgccaaaacgctcaaaccttcaac
ttggaaggatcccagatatacgaggactccattgttcttcagtccgtgttcaagagtgcc
agacagaagatcgccaaggacgaagtgagcgaggacgacagtgatgaggatgatgatgat
gactatgactcagaggcagaggcaaagtccgtgcgtgtgaagatcaagctgggcagggac
ggccgcggccacgataaaggcaagaagaggcagagccgggggaaggccaagccggtggtc
agcgatgatgacagtgacgaggaccaggacgacaacgatctgtcagacagaagcaaaagc
gacgacgactga
DBGET
integrated database retrieval system
