Nematolebias whitei (Rio pearlfish): 119413905 Help Entry 119413905         CDS       T08042                                  Name (RefSeq) dmX-like protein 1   KO K24155   rabconnectin-3a Organism nwh  Nematolebias whitei (Rio pearlfish) Pathway nwh04142   Lysosome Brite KEGG Orthology (KO) [BR:nwh00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     119413905  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nwh04131]     119413905 Membrane trafficking [BR:nwh04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     119413905  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     119413905    RAVE complex     119413905 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_Gbeta WD40_MABP1-WDR62_2nd EIF3I Beta-prop_DCAF12 NBCH_WD40 Beta-prop_WDR19_2nd Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_SPT8 Motif Other DBs NCBI-GeneID:  119413905 NCBI-ProteinID:  XP_037536898 LinkDB All DBs Position 8:13620644..13672280 Genome browser AA seq 3083 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGNINNVPFTAYASGCDVVILGSNFERLQIIPGAKHGNIQV GCVNCSPQGGQIAASYGSIVCIFEPVQLTCQKDTPLSKLNCQWQKTGQFVLKSMVRNLAW HPTGSTLLTGSSSLQLWSNADDGKDEGGERREQTERPKQNAHSTWRCIWQSKTASSVSFM QFSPDGEFFATAGQDDCLVKVWYNTNKWKSCIARLFTPPDTSVSLQGELAFSFVYLAHPR SVTGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLISGYPDNYSYDHNGE TIRCDGKTHGMTPQEFSFQESWHSSLNRDVPQPSMTSCLLHHQSQHHNHKRGNRGPPNAN ALCHFHIAASINPATDIPLLPSISSLNTVDDDEPGGLFTVHWLNNKELQFTLAMEVFLEQ LRGSLEQRNECFNEELEDEENSDDEDSRPVDLHGDDGLPVAAVEHQVDVLIEEWNKAADM LFSIHPIDGSLLVWHVDWLDEFQPGMFRQAQVSFVSRIPVAFPTGDAISLSHSVVMYACN KNVDLAIQHDRQRPPGTSLSRTKSTLISYGSQGKVAPSSSLRLSIFTPNVLMISKHDDGS LNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRTPEAD GIRTPPQAYSRSTSLPYGSRPSRVSLGRVSQDPNAIYSELILWRVDPVGPLSLSGGVSEL ARINSLHASAFANVAWLPTLIPSSCLGVYCNSPSACFVASDGKSLRLYQAVIEAKKLLSE LSNPEMSKYVEEVFNIVSQQSTAKPGCIIELDPITDFKGKATQLLHVFEEDLILGSVGNK ATQETPDSPSSSKPAFSGRFCLVVVELTPTGRSLLHMWHLHIAACPVTVEETTGTSKMDI DPFSPVISSQFIFDTLNSPLTPKNKPLTSNLQSTCRLSLTTQRLCSQEMALPAGVEVISV TPSAGHLSASCSLPSGRVPYLLATSCSDGKVRFWTCNVSPEPSSSDSLVYQWEEWPLLVE ERLPNSSSISVPGRPIKVSCCHTGRIAVAYREAPNTPLNSTPQLSSHLLPTFPNLSSSPY AFHNNTHLIPTLIVHPSLTPNPANTREPPVHISIFQCESTGGSQWILEQTIVLDATDSPI NSAAGIGTTGSSNISSNFHFSAPIEHCPGSASKSLVHLDWVSQEDGSHVLTVSIGTKIYM YGRLSGKPPELGLSSESNKDQSLSRLVLLRLVNLVSSVEGSLPIPISLSWVRDGILVVGM ECEMHVYSQWQPPVPPKPNITVVQDTDISSSISSIASAIRQYQEDGHNSAAPMSSLTLPK RSLTRSMMSLAQKLSGKKTAYDLPEEMEDYGLFEAAYHLFPTLPQYHPVQLLELMDLGKV HRAKAILSHLVKCIAGEIVILKDNATNPEKRVRSRTISVGGSTARDQKIFSNSESSSPDY TEISSIPPMPLYALLAADEDTSQLENVGSMSGDSGRGSSQTDAYDELFHTPNTVDFKPLD NEREENGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMALADTIATTS TDLKDNQDKSKGGETLDECGLRFLLAVRLHTFLLTSLPPVHRAQLLRQGLSTCHYAWAFH SEAEEELLNMLPALQKGEPTWTELRSMGVGWWLCSTNKLRKCIEKVAKASFQRNNDPLDA AIFYLAMKKKAVVWGLYRSQKNVKMTEFFHNNFSEDRWRKAALKNAFSLLGKQRFQHSAA FFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETASTYKKILQRYVLGRDKQIPAH LDPFLRSIAYWVLEDYSKALDTLIEQPAHCKSSGSFENKYDSGSSAMSACNPEVFNFYIY LRTHPLLLRRHFVSSDKAKVALTAEGRRADSISLDERRLFFTAAYAHLHAGCPMLALEVL SKMPKVRKHSKLSRHEDTSITPELSVGSRNGHSEPDWSPPDLNGYHSDANSNSKSDSVLS FDWSQQSLTLPDEPLELKWDSDKDEDDDEEENHNETKTEIKAADNSVFQDKQDSVLTIAE TVKSDKSADSSEFIAPCDDIFLAQLKFTACLKIMTTELRTLSTGYDLDGGKLRYQLCQWL EREVVAHQRCCGYKPCLQEQSVQGNNPVSGLVEEEQPGSPRGDNQRSRRLWLQSNQPLLR MFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSISSVVASSSQPTSIPLLMACTVNVK TVVANPIVYLTNLTHDILHTIVALDSPPHHDVVNNEIYVMHTLAASLSACIYQCLCDGHK YNHVNHFTGTVYQSVLLSQKQPLKTVCLDDAQPNTSPAQWPGIASLFGLLSSAGEEMQPG LAVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLNSKLWRTVFGGGARIAIMDKPSS PARTPPPSSPAGSDRKSKRFRLLSSRSGSREESGIEREGPSSPKRSPVVEQEAASIFKEQ FVPPELSIWDFFIAKPALPPSEDRIDYDSEQSQESQDEDDDDDCDVVFDPNSPQREHSNH NSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVVSPLCHSVLKTLQRWEQVLQKRLE IFGGPPAKYISVHLLDETTTPGPALLRHKALLEPSNIPFRSNHYSALPVKRLWQYLVKQE EVQETFIRNIFIKKPGTNQSVEDQTDNMKYSGTEETGNNQTESDLGCPGGKARIIHKESD IITAFAINKANRNCLVMASTHDIQELDVSSILATQIMTWIDEEETETKNLGGDDFLVVHA RDDFASLHGTTPYTHSSPGTPISVPWLGGQQTGRGASVMIKRNINNVRRMTSHPTLPYYL TGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGSLSLWQTNTSG NTPKPYLTLHCHNKTALDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPANCLVHAFNCH ESGATVLSMAPRQQLLITGGRKGCITILELPHRIQRQSFQAHDSPVKALAVDLTEDCFIS GSAEGNIKVWSITTQCLLYTFPNEHARQSLFRNLGTGVMQIEVGPANHIFSCGADGTMKM RLLPNCFAALDNDGSKRDVKFFI NT seq 9252 nt NT seq  +upstreamnt  +downstreamnt atgaatctccatcaagtccttacaggggctgtcaacccaggggacaactgcttctctgtt gggaacatcaacaatgtgcctttcacggcctatgcatccggatgtgatgtggtgattttg ggcagtaactttgaacggctgcagatcatcccaggggccaaacacggtaacatccaggtg ggctgtgtgaactgctcaccacaaggtggacagattgcagcttcctatggaagcatagtg tgtatctttgagcctgttcagctgacatgtcaaaaggacacaccgttatctaaactgaac tgtcagtggcagaagactggtcagtttgttttaaagtctatggtacgaaacttggcttgg caccccacaggcagcactctgttaacgggctccagcagcctccagctgtggtctaatgct gatgatggaaaagatgaaggtggagaaaggagagagcagacagaaagacccaaacaaaac gctcattctacctggaggtgtatctggcagagcaagactgcatcttcagttagtttcatg cagttctctcctgatggggaattctttgccactgctggacaggatgactgtctggtgaag gtttggtacaacactaacaagtggaagtcatgcattgccagactgttcacacctccagat accagtgtgagtttacagggagaactggccttttcctttgtctacctggcccatcctcgc tctgtcactggtttctcttggaggaaaacaagcaaatacatgcctcgcggtgcagtttgt aatgttctgctcacctgctgtaaagacagcgtttgtcgcctctgggcagagaccttgttg ccaggtgacagcctcatctctggttaccctgacaactactcatatgaccataatggtgaa acaatcagatgtgatgggaagacacatggaatgacaccacaagaattcagttttcaagaa tcatggcattcctccttgaatcgagacgttccccagccgtcaatgaccagctgcctgctt caccatcagagccaacaccataaccacaagagaggcaacagaggaccgcccaacgctaat gctctctgccacttccacatcgctgccagcatcaaccctgccacagacattcctttactg ccctccatctcttctcttaacactgtggatgatgatgaacctggaggtctgtttacggtc cattggctcaacaacaaagagcttcagttcactttagccatggaggtctttttagagcag ctcaggggcagtttagaacaaaggaacgaatgcttcaatgaagagcttgaagatgaagaa aactcagatgacgaagacagcaggccagttgacctccatggggatgatgggcttcctgta gcagctgtggagcatcaggtggacgttttgatagaagagtggaataaagcagctgacatg ctgttcagtatacatcccattgatggctctctgttagtctggcatgttgactggttagat gaatttcaaccaggcatgttcaggcaagctcaggtgtcatttgtgtcccgtatccctgta gcattccctacaggggatgccatctccctgagccacagtgtggttatgtatgcttgcaac aagaacgtggatttagccatccaacacgatagacagcggccgcctgggacctcattgtct cgaaccaaatctactctaataagctatggaagtcaaggaaaagttgcacccagtagcagt cttcggctaagcatttttacccctaacgtccttatgatatccaaacatgatgatggctct ctgaatcagtgggcagtcagttttgcagaggactctgctttttccactgtgctcagtgtt tcccacaaatcacgctactgtggtcaccgtttccacctcaatgacttggcctgtcactcc ttacttcctctcctcctcaccacctcgcatcacaatgccttgaggacacccgaggcagac ggcatccggactcctccacaggcctactcccggtccacgtctctgccgtatgggtcacgg ccctcccgagtgtctctgggcagggtttctcaagatcccaatgccatctacagtgagcta attttatggcgagtagaccctgttggtccactgtctttgtcaggcggggtctcagaactc gctaggataaattcacttcatgcatcagcgtttgcaaatgtagcctggctgccaacactc attcctagcagctgtttaggtgtgtactgtaactccccgagtgcgtgctttgtggctagc gatggcaagtcgctcagactctatcaggctgttattgaggctaagaaactcctgagcgag ctctccaatcctgagatgtctaaatatgtagaggaggtgttcaacattgtcagtcagcag tccacagcgaaaccaggctgtatcatagagctggatcccattactgactttaaggggaag gcgacgcaactcctgcatgtctttgaagaggacctgattcttggcagtgtgggaaataaa gccactcaggaaacccccgactctccttcatccagtaaaccagccttttcaggacgtttt tgtcttgtggtggtagaattaaccccaacaggtcgctcactcctccatatgtggcatctc catattgctgcttgccctgtcactgttgaggaaactactggtacatcaaaaatggatatc gacccgttttctcctgtgatcagctctcagtttatctttgacacactcaattctccatta actccgaagaacaaaccattgacttccaacctgcagagcacctgccgccttagcctaaca acacaaaggttgtgtagccaagagatggctcttccagcaggggtggaagtcatcagtgtt actccttcagcaggtcacttgagcgcatcatgttctctgccatccggtcgcgtgccttac cttcttgccacttcctgttccgatggaaaagtgcgcttctggacatgtaatgtttcacct gaaccctccagttctgacagcttggtgtaccagtgggaggagtggccactcctggtggag gaaagacttcccaacagcagctcaataagtgtgcctggtcgtcccatcaaggtgagctgc tgtcatactggacggatcgctgtagcctacagggaggcaccaaacacacctctaaactca acacctcaactgagctcccatctacttccaacttttcccaacctgtcatcctccccatat gcattccacaataacacccacctgatcccaaccctgattgtgcacccaagtctgactcct aacccagccaacacaagagaaccaccagtgcacatcagcatcttccagtgtgagtccact ggtggttcacagtggattcttgagcaaaccatagtcttggatgccacagattccccaatt aattctgctgctggcattggtacaactggaagttccaatatttccagtaattttcacttt tctgcaccaattgaacactgtccaggttctgctagtaagagtctggttcacttggactgg gtttctcaagaagatggatcccacgtactgactgttagtattgggacaaagatttatatg tacggtcgactgtctggaaagcctccagagctaggtttgtcatctgagtcaaacaaagac caaagcttgtctcgcttggttctgcttcgcctagtcaatctggtgtcctctgttgaaggc tctttgcccatcccaatttccctctcctgggttcgagatgggatattggtagtgggcatg gaatgcgagatgcatgtttattctcagtggcagcccccagttccccccaaacctaatatt acagttgtccaagatacagatatcagcagcagcatctcctctatagcctcagccatcaga cagtatcaggaggacggtcataactctgcagctcccatgtcttcactgacccttcccaaa aggagcctaacaagatcaatgatgagcctggctcagaaactcagtgggaagaaaacagcg tacgaccttcctgaggagatggaagattatgggctctttgaagcagcttatcatctcttt cctactctacctcaataccatcctgtgcagttactggagctaatggaccttggaaaggtt caccgtgccaaagcaatcctctcacacttggtgaaatgcattgctggagaaattgtgata cttaaagataatgccaccaatccagagaaacgtgtgcggtctcgaactatcagtgtcgga ggcagcacagcaagggaccagaaaatattcagcaattcagagagctccagccctgactac acagagataagctccatccctcccatgcctttgtacgccctgctggcagctgatgaggac acgtcacaacttgaaaatgtgggcagtatgagtggagacagtgggcgtggctccagccag actgatgcttatgatgaactctttcatacacccaacactgtggattttaaacccctggat aacgaacgggaggaaaatgggaataaggtgatagacttgtcccagtacagtccaacatac tttggtccagagcatgctcaggtcctgtcaagccacctcctccactccagtttgcctgga ttaactcgaatggagcagatgtcgcttatggctctggcagataccatcgctaccacaagc acagacctcaaagacaaccaggacaagagcaaaggtggagagactcttgatgaatgtgga ctgaggttcttgctggctgtcagactccatacctttcttctaacctccttgcctcctgta catcgagcacagctgctacggcaaggtctgtcaacctgtcattatgcctgggcctttcac tctgaagctgaggaggagctgctgaacatgctgcctgctttgcagaaaggggagcccacc tggacagagctgcgctcgatgggcgtgggctggtggttgtgcagcaccaataagctgcgc aagtgcattgagaaggttgccaaggcttcctttcagcgaaacaatgatcctctggatgca gctatattttaccttgccatgaaaaagaaggcagtggtttggggactgtacaggtctcag aagaatgtaaaaatgacagagtttttccacaacaacttcagcgaggacagatggaggaaa gcagcactgaagaatgccttctctctgttgggaaaacagcgattccagcattctgcggct ttttttcttctcgccggctccctcaaagatgctgtggaggtgtgtttagagaaaatgcag gacctgcagctggccctggtgatctctagactgtatgagtcagagtttgagacggcgtcc acatataaaaagatcctccagagatacgttttgggacgtgacaaacagattccagcacac ctggatccattcctacggagcatagcttactgggtcctggaggactatagcaaagcgctg gacactctaattgagcagcctgctcactgcaaaagctctggatccttcgaaaataaatat gacagtggttcttcggccatgtctgcttgcaaccctgaggtctttaacttttacatctac ctccgtacacaccctctccttctccgccgccattttgtttcctcagacaaggcaaaagtg gctttgactgctgaaggtcgcagggctgactccatcagtctggacgagagaagattgttt ttcacagctgcatatgcacatctgcacgctgggtgccctatgctagcccttgaagtcctt tccaaaatgcccaaagtccgcaagcattctaaactctccagacacgaggacacaagcatt acacctgaactcagtgttgggagcaggaacgggcactcagaacccgactggtctccacct gacctgaacggctaccactcggatgcgaacagcaacagcaaatcagattcagtgttaagt tttgactggagccagcaatcactgacccttccagatgagcccctggaattgaagtgggat agtgacaaagatgaagatgatgatgaggaggagaatcataacgagactaaaacagaaatt aaagctgcagacaacagtgtgtttcaagacaaacaagactctgtgttgacgatagcagaa acggtgaaaagtgataagagtgcagacagcagtgagttcattgcaccatgtgatgacatc tttttggcccaactcaagttcactgcttgcttgaagattatgaccacagagctgcggacg ctgtcaaccgggtatgatctggatggagggaagctacgttaccagctctgccaatggcta gaaagagaggtggtggctcaccagcgctgttgtggctataagccctgcttgcaagagcag tcagtccagggtaataaccctgtttctggactagtggaagaagaacagcctgggagcccc cgtggtgacaaccagaggagcaggagactctggctgcagagtaaccagcctttactgagg atgtttctgagctactgcagcttgcatggctctcatggcggagggctagcttctgtacgc atggagctcatattgctgctacaggagtcccaccaggatgactctatctcttcagtggtg gcatcaagttcccagcccacttctattcctcttctcatggcttgtacagttaatgtgaag accgttgtggccaaccccatcgtctacctgaccaacctgactcatgacatcctgcatacc atcgttgcgctcgactctcccccacatcatgatgttgttaacaatgagatctatgtgatg cacacattggccgcttccctgtctgcctgtatttatcagtgtctttgtgatggacacaaa tacaaccacgtgaaccatttcacaggaactgtgtatcagagcgttctgctgtctcagaag cagccgctcaaaactgtctgcctggatgatgctcagcccaacacgtcacctgctcagtgg ccaggtattgcctctctttttggcctgttgagctcagcgggtgaggagatgcagccgggc ttggctgtgctgctctgtgagatcctgactgctgtcttcctcagtctgtttgttcacggc atggccactcattccagcaacgagctgtttcgcatcgtggctcacccgctcaacagcaaa ctctggaggacggtgtttggaggaggcgctcgcatcgctatcatggataaacccagcagt ccagcaagaacacccccaccaagctcaccagctggctcagacaggaaatccaaacgattc aggcttctttcatcacgcagcggatccagagaagagtctgggatagagcgggaggggcct tccagtcctaaacgcagccctgttgtggaacaggaagctgcctccatcttcaaagagcaa tttgtgcctccggagctcagcatttgggattttttcattgctaagcctgcgttgccgcca tcagaagacagaatcgattatgactctgagcagagccaggaaagccaagatgaagatgat gatgacgactgtgatgtcgtgtttgaccccaactctccccagagagagcattcaaaccat aattcatacagctggtgtttaatgcgtctggccatggtgcagttggtgttggtcaacctc aagtctttttacccaatggcgggatacgatctgctagatttgcccgttgtgtcgcctctg tgtcactctgtcctgaagacgctgcaacgctgggagcaggtgttgcagaaaagactagag atctttggtggcccccctgctaagtacatctcagttcaccttcttgatgaaaccaccaca cctggacccgccctgctcagacacaaagctctgttggaaccgtccaacatcccattcaga agtaaccactattcagcactgccagtgaaacgtttatggcaatatttggtcaagcaggaa gaagttcaagagactttcatcagaaacattttcatcaagaaaccaggcacaaatcagtcg gttgaggaccagactgacaatatgaaatattcagggacggaagagacgggaaacaatcag actgagtcagatctgggctgccccggaggcaaagcacgcatcatccacaaggaatctgac atcatcacagcctttgccatcaacaaggcaaaccgcaactgtttagtcatggcctccacc catgacattcaggagctggatgtgtcatccatcttggccacacagatcatgacatggatc gatgaggaggagactgaaaccaagaatcttggtggggatgacttcctggtggtccatgct cgtgacgattttgcttcactgcacggcaccacaccgtacacccacagtagtcccggcaca cccatcagtgtgccctggcttggggggcagcaaacgggcaggggtgcatcagtgatgatc aagagaaatatcaacaatgtgcgaagaatgacctcccatcccacgcttccatactacctg acaggagctcaggatggcagcgtgcgaatgtttgagtggggtcactcccagcagatcatc tgcttcagaagtccaggcaactccagagtcaccaggatccgattcaaccaccaaggaaac aagtttgggattgtagacgctgatggaagtttgagcctctggcagaccaacacaagtggg aatacacccaaaccatatctgactttgcattgtcacaacaaaactgctcttgatttcgtc tttgtgggctcgtcctctctcattgctactgcaggtctctccacagataacaggaacgtg tgtctgtgggacactttagtcactccggcaaactgcctggttcacgcgtttaactgccat gagtccggggccaccgtgctctcgatggccccaaggcagcagcttcttatcaccggcggg aggaaaggttgtatcaccatcttggagcttccccaccggatccaacggcagagctttcag gcccacgactcaccggtcaaagcgctggctgtcgatctaacagaggactgcttcatcagc ggatcagctgaaggcaacattaaggtgtggagcatcaccacgcagtgtctcctctacacg tttccaaacgaacacgctcgccagtcgctgttcaggaacctcgggacgggcgtgatgcag atcgaggtgggaccggccaaccacatcttctcctgcggcgccgacgggaccatgaagatg aggctcctccccaactgcttcgccgccctggacaacgacggcagcaagagggacgtcaag ttcttcatataa

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