Nematolebias whitei (Rio pearlfish): 119413908
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Entry
119413908 CDS
T08042
Symbol
rnf165b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119413908 (rnf165b)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119413908 (rnf165b)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119413908 (rnf165b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
U-box_ZFPL1
zf-RING_Vps41
zf-ANAPC11
zf-RING_16
Prok-RING_4
RINGv
zf-RING_4
zf-Nse
zf-RING-like
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
119413908
NCBI-ProteinID:
XP_037536902
LinkDB
All DBs
Position
8:13952792..13965708
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AA seq
354 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGSHFNRQQQYSHATSCRHFQLGPQAPLPMDFPMPHPGQPQ
SGINPHLVSPGHQHGPPLHAPLNPLPAPQFQDIHAPPFLPQALHQQYLLQQQILEAQHRH
ILPPSSRRTPERVPHQPHRLRPGYEFGPPLHVPPQPVVQQPRYLAEGTDWDLSVDAGLHP
HQYHIHPLPQHYQHYLTSPRMHHFPRNNASTTQVVVHEIRNYPYPQLHLLALQSLNPSRH
ASAVRESYEELLQLEDRLGSVNRGAVQAIIERFTFPHKYKKRIPQDLKLCLDDEELDTDE
KCTICLSMLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIETQLTPES
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtgcatgtaggatatctggttcttcccgttttcggctcagtaagaaacaga
ggatcccattttaaccggcagcagcagtacagccatgctacctcctgcaggcacttccag
ttagggcctcaggccccgctgcccatggactttccaatgccccacccagggcagccacag
tcaggcattaacccccacctggtatccccaggccaccagcatggccctccactccacgcg
cccctcaaccccctgccagctccccagttccaggacatccacgcccctcccttcctacct
caggcattacaccagcaatacctcctccagcagcagatcctcgaggcccagcaccgacac
atcctgccaccctccagtagacgcaccccagagagagttcctcaccagccccacagactg
agacctggctacgagtttggacccccgcttcacgtcccacctcagccagttgtgcagcag
cctcgctacctggctgagggcacagactgggatctgagcgtagatgctggactgcaccct
caccagtatcacatccacccgctaccgcagcactatcagcactacttgacctcccccagg
atgcaccactttcctagaaacaacgcctcaacaacacaagtggttgtccatgagatcaga
aactacccgtatccccaactgcacttgctggctctgcaaagtctcaacccttcccgccac
gcctctgctgtcagagagagctacgaggagcttctgcagttggaggatagactgggcagt
gtgaaccgtggagccgtccaagctatcatcgagagattcactttcccccacaagtacaaa
aagagaataccccaagacctgaagttgtgtctggatgatgaggagctggacacagatgaa
aagtgcaccatttgtctgtcgatgctggaagatggcgaggatgtcaggagattaccctgc
atgcacctctttcaccaggcgtgtgtggatcagtggctggccaccagcaggaagtgtccc
atctgcagagtggacattgagacccagctgaccccggagagttga
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