KEGG   Nematolebias whitei (Rio pearlfish): 119413950
Entry
119413950         CDS       T08042                                 
Name
(RefSeq) ubiquitin-associated protein 2 isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nwh04121]
    119413950
   03400 DNA repair and recombination proteins [BR:nwh03400]
    119413950
Ubiquitin system [BR:nwh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    119413950
DNA repair and recombination proteins [BR:nwh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     119413950
SSDB
Motif
Pfam: UBAP2-Lig GIP1_N UBA_RAD5A
Other DBs
NCBI-GeneID: 119413950
NCBI-ProteinID: XP_037536952
LinkDB
Position
8:complement(19389054..19407076)
AA seq 1180 aa
MMTSVVSNQTRGSRDKPLPTSTPTSQPQKQIQATAEQIRLAQVIYDKNDADFEDKVKQLI
EVTGKNQDECVVALHDCFEDVNRAINFLLESTSDTNSWETVGKKRNLGKEAGPSDVKENR
ADVKENREKKAEREVSRGRGGSNRRGRGISRGREGMKSKGRTEENGFDVAPGERGGDHGR
RGRGRGVGGRGRGRGAAGNRFSSQGMGTFNPAEYSANSGAQQENWDGEGNETAEGTGTWG
GNTEEWTSEDWNEDLSETKVFTASSAPTNNIVPGRNVDFSTLLPKTGGTVGGSVDPDLGA
IVDGHSSEDLGQSLVFTNSHHNGRSAPHSYAHATANSYAHAASANTTYAMSSVIGSGFGS
LNVPKQAPAADIRTSEHLNGPRLGQRTSQMVATTSSSNVSKESGPPPVQNTAPAPSPSAD
TMVQRVENSPVMSQSLEMKIQPEPSAVLSQLAQRQQQSSILTTTEPLGLSQSHAPQVPTP
PGHESSIPPVRDGASPGGKQPGLEFSITEAPQRQLKTQRRRAPPPSKIPSSAVEMPGSAD
VSGLNVQFGALDFGSEAGSAAADMSQPEMSREHTPAMAQTNIPTSAPVSTQQQQSSIFPK
PGAMSEHMSSLPSAVSDGSFPSPSMGLPSAAPSSSLGLPSAAAASSVPTTTSRVENSGSR
SLPPHLGFSQGKDVPSASSAPLMNGYSGMKTQSTQEVTSSSRTIKSESTVMSSDGSSGHH
IPSPAVTPSHSTVSSLSSHVSSSLSSGSTLTTNSSLTITNEDSSNNLHSFSTSASQVVYP
SAPLSASSSSSNGLHQTGGPGLTANGTNPTVPAAGSRTAPQLATTSGKAPPNLAQGVPPL
LANQYIMGPGGLLPAYPQIYGYEDLQMLQSRLPLHDFYGVTFPGATAPMPGRDGLPNNLY
SGEATKFGRNDSSPPAPPTSLSTAGVQSQPQQTQQTGTQGPGQNQNQGQQTQNQAFLNPP
LPPGYGYTGLPYYAGMPGVPSAFQYGPTVFVPPASAKQPAMGLANPSSQYHQQHQPSYGQ
HAYGTAFDDLSQAHGGEYNKAGYGGSAQSQAKSAGSGPGKATGLSGPGTSGVVPDMGASI
YSKTQSFDKQGFHTGTPPPFSLPSALGGTGPINPAGAPGYAPAPFLHILPPHQQPHSQLL
HHHLTQDGQGGPGQRNQSGSMQQKTQGSKSSYGSSPYWAN
NT seq 3543 nt   +upstreamnt  +downstreamnt
atgatgacttcagtggtcagcaatcagaccagagggtcccgggacaagccgctgcccacc
tccacaccaacatcacagccacagaaacagatacaggccacagcagaacagattcgtctt
gcccaggtgatttacgacaaaaatgatgctgactttgaagacaaggtcaaacagttgatt
gaggtaactgggaagaatcaagatgaatgcgtggtagccctgcacgactgctttgaagat
gttaacagagccatcaattttctgctggagagcacttctgacacaaactcttgggagact
gtggggaagaagcgtaaccttggtaaagaagccggaccttcagatgtaaaagagaacagg
gcagatgtaaaagagaacagagagaagaaagcagagagagaggtcagtcgtggacgtgga
gggtccaacaggaggggcagaggaatcagccggggtcgtgaaggtatgaaaagtaaaggc
aggaccgaggagaatgggtttgatgtggctcctggagaaaggggtggtgatcatggacgc
aggggccgtggcagaggggtaggaggtcgtggcagaggaagaggagctgctggtaacaga
ttctcttctcaagggatgggtacttttaatcctgctgaatacagtgcaaactctggagct
caacaggagaactgggatggtgaaggcaatgaaactgctgagggaactggtacatgggga
ggcaatacagaagagtggacttcagaagactggaatgaggatttgtctgagaccaaagtg
tttactgcctcttctgctccaacaaacaacattgttccaggacgaaatgtggacttctct
accctactgccaaagaccgggggcactgtaggaggttctgtggaccctgacttgggagcg
atagtagatggtcactcttcagaggatttgggccaaagcctggtgttcaccaattctcat
cacaatgggcgcagtgcaccacacagttacgcacatgccacagccaacagttatgcccat
gctgcctctgctaacaccacctatgcaatgtcttcagtcataggttctggttttggatcc
ctgaatgtacctaagcaggcacctgctgctgacattcggacatcggagcacctaaatggt
cctcggcttggtcagagaactagtcagatggtggcgaccacctccagcagtaatgtgtcc
aaagaatcagggccacctccagtgcaaaatactgctcctgccccctccccctctgcagat
accatggtccaaagggtagagaacagccccgttatgtcccaaagcttggaaatgaagatt
caaccagagccatcagcagtgctcagccagctggctcaaaggcagcaacagtcctccatt
cttacgaccacagagcctctgggcctgtctcagtcacacgcaccacaggtcccaacacca
ccaggccatgagtcctccatcccacctgtaagagatggagcttctcctggaggcaagcag
ccaggtctggagttttcgatcactgaggccccccagcggcaattaaagacacagagacgc
agagcacctcctccttcaaagattccatcatcagctgtggagatgcctggctcagcggat
gtatctggtctgaatgttcagtttggagctcttgactttgggtctgaagctggtagtgca
gcggcagacatgtcacagcctgagatgtccagagagcacacccctgccatggcccaaaca
aatatacccacttctgcacctgtttccacacagcagcaacaaagcagcattttccccaaa
ccaggagctatgagtgaacacatgagcagcttaccctcagctgtatcggatggcagcttc
ccatcaccatctatggggttacctagtgctgccccctcctcttctcttggcctccccagt
gcagcagcagcttcttctgttcctacaacaaccagtcgtgtggagaacagtggttcaagg
tccctgcctccccatcttggcttctctcagggcaaagatgtcccatcagcttctagtgca
cctctaatgaatggttacagtggtatgaagacacagagcacacaggaagttacatcgtca
tcaagaacaataaaatcggagtctactgttatgagcagtgacggcagctcaggccatcat
atcccttctcctgcagttactccttctcactcaacggtctcgtcgcttagcagtcatgtg
agcagctctctctcgtctggatcaactctcaccacaaattcctcccttacaataaccaat
gaggacagcagcaacaacctccactccttttcaacatcagccagtcaagttgtatatccc
agcgctcctctgagtgccagtagttcgtccagcaatggtctgcaccagacaggaggacca
ggacttactgcaaatggcacaaaccccacagtcccagctgcaggcagccgcacagcaccc
caactcgccacgacttctggtaaagctcctcccaacctggcccaaggagtgccccctctc
ctggccaaccagtacattatgggccctggtggcttgcttccagcttatccacagatctat
ggatatgaagacttgcagatgctgcagtctcgccttcctttgcatgacttctatggtgta
acattccctggtgctacggctccgatgcctggaagagatggcctgcctaataatctttat
tctggtgaggcaacaaagtttggcaggaatgactcttcacctccagcacccccaaccagc
ttgtctacagctggggtgcagtcccagccccaacagacacagcagacagggacacaaggt
ccagggcagaaccagaaccagggtcagcagacacagaaccaggccttcctcaaccctcct
ctgccaccaggctatggatacactggtctgccatattacgccggtatgcctggggttccc
tcagcctttcagtatggccctaccgtctttgtgcctccagcttcggccaaacagcctgca
atgggcctggccaacccctccagtcagtaccaccaacagcatcagcccagttacgggcag
catgcatatggcacagcctttgatgacctgtctcaagcccatggtggggaatacaataag
gcagggtacggaggctctgcccagtcacaggccaagtcagcaggcagcggcccagggaaa
gcaacaggattgtcaggaccgggtaccagtggtgtagttcctgacatgggagcttctata
tacagcaaaacacagtcatttgacaagcagggtttccacacagggaccccacctcccttc
agcctgccttcagcactgggagggacagggcccataaaccctgcgggtgcacctggctat
gcccctgcacccttcctgcacatcctgcctccacaccaacaaccccactcccagctgctg
caccaccatctcacacaggacggacagggtggtcctggtcaacgcaatcagtccggcagt
atgcagcagaaaacccaaggcagcaagtccagctatggcagctccccatactgggcaaac
tga

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