Nematolebias whitei (Rio pearlfish): 119413952
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Entry
119413952 CDS
T08042
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
119413952 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119413952 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119413952 (clip1a)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
119413952 (clip1a)
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
119413952 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
TMF_TATA_bd
CALCOCO1
Crescentin
Fez1
Motif
Other DBs
NCBI-GeneID:
119413952
NCBI-ProteinID:
XP_037536955
LinkDB
All DBs
Position
8:complement(19534529..19558356)
Genome browser
AA seq
2158 aa
AA seq
DB search
MSSAKSTGIKVPSKIAKPPGTGAPKTNPVTAKVTGTDKSAPGASGGDENKAEENFQVGER
VWVNGNKPGNIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEALRGIFTRPSK
LSRTEGEANGTQTAPQSRAASPTPSVGSVAPQTPVTNSAMPTSAATAKKAPSTSTAAPSS
NLARTNSESVSNLSESGSVKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEWCGVEL
DEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKATARKVVATPTGLK
RSPSASSISTMSSVTSSVSTKPSRTGLLTETSSRYNRKISGTTALQEALKEKQQHIEQLM
AERDMERAEVAKATSHVGEMEQEIGVLRDDQEQMETKMDQLRALVEAADKEKVELLNQLE
EERRRVEDLQFRVEEACITKGDLEVATVSERSRIMDLERDLSLKTREVADMQLRLGIQLS
SDSDSNSVSPLLEEINSLKDQLASQEAKWQEEVGKYKERLEDQEKTHGEAVAQIQASSVK
LSSEKEQLQIRLSQAEKENADAVELWRSKLESALTSHQQTMEELKASFSKGAGAQAEELV
EAKSALEKLKMEHKLALDEAAAKREAGVSAWTQEMQVLKAQLRSLTEDKERLGESLRSGV
EKAEEQHLVEMEDVLGKLHAAEVRVKELEEKEAVMAQQVQDKDGETKEHKAEIEALSSQL
AQKSQESVTLKSQLENVQNQGNSHSTQVNELSSQLGSKEQEVVSLQQSLTTVQQQKDSLE
QELESLKNKLDESTEKLAKSAKTMQETRENLSKKEEQCTFLSTESESLRSQLTGLERKLK
AADEKLEQFSKDKSKLEKDIFEMMKTSGNSSVQLTKMNEDLTLKERRLEELQNQLAEEKE
KVAHLEELQQEQSKKEQELKENRDLHLVQISSLQEKINNLETTLKQNEILVEDLKASNKK
SLSEASELMEVTIKNKLLSAELDSYKQDVDHLSNKLEKQNLDLENLFKESEDVKTERDKL
EQQVSEMQNKLSALEISCKELSEQNEELVGSKHELLKHQEELLTNKKQSDEERISLNKEM
ETLKRLLQEAQTVNEEQQHSKAEYLAQIDELQRQNSEKNDCVLKHQIDIQQIESKKEQLL
QDYENLCKERNRLEEDLSETKSKLTSERDNLILERDAARNARNSLDAKSAELQGKLKSLT
LEKEDLTMKNTQLQALTETLTKEKIGTSSELSAAALDKRRLETEKEELQNKLSLTEKELE
RIVRECEELKASKMSLSQLLEEFKTSSQVTDSERLHLLQEKEDLLANQRKVSNEKQELLG
QVEEIRKKLHVSTEQLSRSNEKMKEAFSSFEQEKQTLSLRISDTEMALHDLRKEKMSLDS
AVEQQKMDYERLAVEKGELEEKYTKSISEKEALAFEREKLASDIRTTRDQLDRNTRANAD
LHQDKNRLMTMMEEAKNQKNELEVEMTTLKRERTDLESELQKLRSDAEILEKTKTELAEQ
KRIKMEFEKSNLDLVQQVDNVNKNYHHIQSIQAEAENKVQSLERENQVLLREIQEFKNQI
ESVSEASKLLETKLQAEYGERSKATFDRDDLSKQLEDLQKTLSTVTQEREDLSSSLKNAD
EQKSSLTEEMQTLKTKLMQKEQENCELVEQKEQLSSKLEEMDKRITLMATEKEELFAVQA
KLKAEISSLSSKKENWLTERCSLVDEVKCLQASKEQLAAEVEAQQTEREKLEKQYKDALE
EEISSSISDLTAQKGAMQVERDEAAQRVRELESQLKNVLSKQLEAAEAAGKTSEALDLLT
KEKAVLLKEKNEAQSLLEELQSSKEEMQTQLETLGKENSKYQEDLNVSKEQLCTETQKIK
SLCQDIEELKELVSVKTQTLQTLQDENSRLSQQLHNGHKDQSELVALQDEHLKLKKELEE
LKQSLPNNAFSESTLKEQSDKEKATLQQSIYKTSALISEKEQQVENLKSELAAVREESAS
VKKLQSTIQALEQDKAFLREQIQRLEKDLTAGPDDVNKASGDVILDQMKEDRETAEGQAA
IEFLNSVIVDLQRKNGELKDKLEKMAAAALNGNDPSELDNSDGFENQPVKKKPPPRLFCD
ICDCFDLHDTEDCPTQTQIPDSPPHTTYHGNKDEERPYCDICEVFGHWTESCNDDQTF
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagccaaatcaactgggatcaaagtcccgagcaagatagctaagccacctgga
actggagcgcctaaaacaaacccagtcacagctaaagttactgggacagacaaatcagct
ccaggtgccagtggaggagatgaaaataaagctgaggaaaacttccaggtcggggagcga
gtttgggtgaatggaaataaaccaggcaacatacagtttttaggagagacccagtttgcc
ccaggacagtgggcaggaattgtcctggatgagccgattgggaagaacgatggctcagtt
gcaggtgtgcgctacttccagtgtgaagcccttcgggggatatttacccgcccttccaag
ttgtctcgcacagaaggagaggccaatggaactcagaccgcaccgcagtcccgtgctgcg
tcgcccaccccttcagttggaagtgttgccccacaaacaccggtcacaaactccgcaatg
cccacgagtgctgcgacagctaagaaggccccttccacttcgacagctgcaccatcttca
aaccttgcacgcaccaacagcgaatctgtctccaacctctctgagagtggctcagtcaag
aagggggaaagggagctgaagatcggggaccgtgtgctggttggtggtacaaaagcaggg
gtggtccgtttccttggagaaactgattttgctaaaggcgagtggtgtggtgtggaactg
gatgaaccacttggaaagaatgatggggcagtggctggcaccagatattttcaatgccaa
cccaagtatggcttatttgctcccgttcacaaagtcacacgcataggttttccttccaca
acaccagccaaagcaaaagcaacagctcgaaaagtagtggccacaccgacagggctgaag
agaagccctagtgcctcatctattagtaccatgagctcggtgacgtcttctgttagcact
aagccaagtcgaactggcctgttaacagagacgtcatcgagatataatcgaaagatttca
ggcaccacagccctgcaggaggcgctgaaggagaagcaacagcatattgagcagctaatg
gctgagagggacatggaacgagctgaggttgctaaggccaccagccatgttggagagatg
gagcaagaaattggtgtcctccgggacgatcaggagcagatggagacaaaaatggatcag
ctgcgggccttagtggaagctgcagacaaagagaaagtggagttgctgaatcaactggag
gaggagcgcaggagggtggaggaccttcagtttcgtgttgaagaagcttgcattaccaaa
ggagacctggaggtcgctactgtgtcagaaagatctcgcattatggatcttgagcgagac
ctttcgttgaagacgagagaagtagctgacatgcagctgcgtcttgggatccaactgagc
tcagactcagactcaaactctgtctccccactgctggaagagataaactctcttaaggat
cagctggcatctcaagaagctaaatggcaagaagaggtggggaagtataaagaaagacta
gaagatcaagaaaaaacccatggtgaagcagttgcacagattcaggcttcgtctgtaaag
ctgtctagtgagaaagagcagctacagatacgattaagccaagctgagaaggagaatgct
gacgctgtagagctatggcgttccaaattggagtctgccttgacttcccaccaacaaact
atggaagagctgaaagcttccttcagtaaaggtgcaggggcccaggcagaggagcttgta
gaggccaaaagtgctctagaaaagctcaagatggagcacaagttagctttagatgaggct
gcagccaaacgtgaagctggtgtctcagcctggactcaggagatgcaggtcctgaaggca
cagctgcggtctttaaccgaggacaaggagcgactgggagagtcgctgcggtccggtgtg
gaaaaagcagaagagcagcaccttgtggagatggaggatgttcttggaaagcttcatgct
gctgaagttcgagtgaaggagcttgaggagaaagaagcagtcatggcacagcaggttcaa
gacaaagatggagaaaccaaagagcacaaagcagagatagaggctctcagcagccagtta
gcacaaaaaagccaagagtctgtaactctcaagagtcaactagaaaatgtacaaaatcaa
ggaaacagccattctacacaggttaatgaactgagctcacagttggggagcaaagagcaa
gaagttgtctctttgcagcagagtctgacgactgtacagcagcagaaggactctctggaa
caagagcttgaaagcttgaaaaataaattggatgaaagcacagagaagctggcaaaatca
gctaaaactatgcaagaaacacgtgagaatctcagcaagaaagaagagcagtgcacattt
ttatccacagagtcggagtctctaaggagtcagcttactggattggaaaggaaactgaag
gctgcagatgaaaagcttgagcagttttcaaaagataaaagtaagctggaaaaggatatt
ttcgagatgatgaagacatctggtaatagttcagttcagctgactaaaatgaatgaagac
ctcacactaaaggaaaggagactcgaggagttgcagaatcaactcgcagaagagaaggag
aaggtggcacatttagaagaactccagcaagagcagtcaaagaaagagcaggagctgaaa
gagaatagagatttgcatctggttcaaataagtagccttcaggagaaaattaataacttg
gagactacacttaaacaaaatgagatccttgttgaggatctgaaggcatcaaataagaag
tccctctctgaggcttcagagctcatggaagttaccataaagaataagctcctttctgct
gagcttgactcctacaaacaggatgttgatcatttgtcaaataaactggaaaagcagaat
ctagatctggaaaacctgtttaaggaaagtgaggatgttaaaactgagagagacaagtta
gagcagcaggtttctgaaatgcagaataagctttctgcccttgagattagttgcaaagag
ctttcagagcagaatgaagagctggtaggatcaaaacatgaacttttaaaacatcaagag
gaactactcactaataaaaaacagtcagatgaagagagaatttcactgaataaggaaatg
gaaactctcaagcgcctccttcaggaggcacagaccgtaaacgaagaacagcagcacagt
aaagctgaatatctggctcaaattgatgaacttcagagacaaaactcagagaagaacgac
tgcgtcctgaagcatcaaatagacatccagcaaattgagtctaaaaaggagcagctgctt
caggattatgaaaacctctgcaaagaaaggaaccggctcgaagaggacctcagtgaaacc
aaatcaaaactcacatctgagagggacaatcttatattagagcgagatgcagctagaaat
gccagaaactctcttgatgcaaaaagtgccgagcttcagggcaaactcaagtcgctgact
ttagaaaaagaggatcttacaatgaagaatacccagcttcaggccctgacagaaacactg
acaaaagagaagatcgggacgtcctctgaactcagtgctgctgccttggacaaaagacgc
ctcgagacagagaaagaggagctccagaataagctcagccttacagagaaagagttggag
aggattgtccgtgaatgtgaggagcttaaagcctctaaaatgagcctgtctcagttgttg
gaagaattcaaaaccagcagtcaagtgactgattctgagaggcttcaccttctgcaagaa
aaagaggacctgcttgcaaaccaaagaaaagtctctaatgagaaacaggagctccttggg
caggtggaagagatcagaaagaagctgcatgtctcaacagagcaactgtctcgttctaat
gagaagatgaaagaagcgttctcctcctttgagcaggagaagcaaacgttgagccttcgg
atttcagacactgagatggctctgcatgatctgcgaaaagaaaagatgagcttggattca
gctgtagagcagcagaagatggattatgagcgtttggcagtggagaagggagagttggag
gagaagtacacaaagtccatatcggagaaagaggctcttgcttttgagcgtgagaagctt
gctagtgacatcagaacaactagggaccagttggacagaaataccagagctaatgctgac
cttcatcaagacaagaaccgtttaatgacaatgatggaggaagccaaaaatcagaaaaac
gagctggaagttgaaatgaccaccttgaaacgggagaggaccgaccttgaaagtgaactg
cagaaacttcgctctgatgctgaaatccttgaaaagaccaaaactgaacttgctgagcag
aagagaataaaaatggagtttgagaaatcaaatttagatctcgttcaacaggtagataac
gttaataaaaattaccatcacattcagtcgatacaagctgaggctgaaaataaagtgcag
tctttggagagggagaaccaggttttgcttcgggagattcaggagtttaaaaatcagatt
gagtctgtttcagaggccagcaaacttcttgagacaaagctacaagctgaatacggtgaa
cgaagtaaagccacgtttgacagagacgatctttccaaacaacttgaggaccttcagaaa
acgttgtctacagttacacaggaacgtgaagatctttcttccagccttaagaatgctgat
gaacaaaagagctctttaacagaggaaatgcagactttgaaaaccaaactaatgcagaag
gagcaagaaaattgtgaactcgtagaacaaaaggaacagctgtcatctaagcttgaagag
atggacaaacggataactttaatggccacagagaaagaagagctattcgctgtgcaggct
aagttgaaggctgaaatctcttctcttagctcaaagaaggaaaattggctcaccgaacgc
tgctcacttgttgacgaggtgaagtgtttgcaggctagcaaggaacagctagcagctgaa
gtcgaggcccagcaaactgagagagagaagctggaaaaacagtacaaggatgctcttgaa
gaagaaatttcctccagcatctcggatctcacagctcagaagggtgccatgcaggtggag
agggatgaagccgcccagcgagtcagggagctcgagtcgcaactaaaaaatgtcctttct
aagcagcttgaggctgccgaggctgcagggaagacttctgaagctcttgacctgctgacg
aaagagaaagccgttctgttgaaggagaagaacgaagctcagtccctgctggaggagctc
cagagctcaaaggaggaaatgcagacccagttggaaactttggggaaagagaattccaag
tatcaagaggacctgaacgtgtccaaagagcagctttgcacagaaacacagaagataaag
agtttatgccaagacattgaggaacttaaagaattggtttctgtgaagacacaaaccctg
cagacgttgcaagatgagaacagccggctgtcccagcagcttcataacggtcacaaagac
cagagtgaacttgtagcgctacaggatgagcatttaaaactcaaaaaagagctggaagag
ttgaaacaaagcctgccaaataatgccttcagcgaaagcactttgaaggagcagtcggac
aaggagaaggccaccctccaacagtccatctataaaacaagtgccttaatctcagaaaag
gagcagcaggtggaaaacctgaagagtgagctggctgcagtgcgtgaagaaagtgcctca
gttaagaagttgcagagtacaattcaggccttggagcaggacaaagcttttctacgggag
caaatccagagactagagaaagacctcactgctggacccgacgatgtcaacaaggcttca
ggtgatgtgattttggaccaaatgaaagaagatagagagactgcagagggtcaggcagcg
attgagttcctgaattcagtcattgttgaccttcagaggaaaaatggggaactcaaagac
aaactggagaaaatggcagctgctgctctcaatgggaacgatccgagtgaactagataac
agtgatggctttgagaatcagcccgtaaagaaaaagcctcccccgagactgttctgcgac
atctgcgactgcttcgacctccacgacacggaggactgtcccactcagacgcagattcca
gattcgcctcctcacaccacctaccacggcaataaggatgaagagcgaccctactgcgac
atctgcgaggtctttggccactggaccgaatcctgtaacgatgaccagaccttttaa
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integrated database retrieval system
