KEGG   Nematolebias whitei (Rio pearlfish): 119414022
Entry
119414022         CDS       T08042                                 
Symbol
ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1 isoform X1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nwh03036]
    119414022 (ciao1)
   03400 DNA repair and recombination proteins [BR:nwh03400]
    119414022 (ciao1)
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    119414022 (ciao1)
DNA repair and recombination proteins [BR:nwh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     119414022 (ciao1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WDR55 WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_Vps41 NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st eIF2A Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_ELP1_1st B-prop_COPA_B_2nd WD40_RFWD3 Beta-prop_NUP159_NUP214 Lactonase RMC1_N
Other DBs
NCBI-GeneID: 119414022
NCBI-ProteinID: XP_037537060
LinkDB
Position
8:28143168..28145606
AA seq 329 aa
MKEALTLVQRISAHPDSRCWFVAWSPNGTLLASCGGDKAVRIWGLEGDSWVCKTVLLDGH
QRTVRKVAWSPCGNFLASASFDATTCIWKKKNDDFESLTVLEGHENEVKCVAWAPSGNLL
ATCSRDKSVWVWEVDEEDEYECVTVVNSHTQDVKHVAWHPNQELLASASYDNNICIYKEE
DDDWECRATLQGHTSTVWSLCFDATGQRMASCSDDRTVKIWKEFPGESGDLSWKCVCTLS
GYHGRTVYDIAWCRLTGALATACGDDAVRVFKEEAAASPDEPVFSLAAQETKAHSQDVNC
VSWNPKEAGLLASCSDSGDIAIWRFKEDE
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaaggaggctctgacactggttcagaggatcagcgcacacccggactctcggtgctgg
ttcgtcgcttggagcccgaacgggaccctgttggcttcatgcgggggtgacaaggccgtc
cggatatggggactcgaaggtgactcttgggtgtgtaagactgtgctcctggatggacac
cagcgcaccgtgaggaaggtggcctggtctccgtgtgggaacttcttggcctctgccagc
tttgatgcaaccacatgcatctggaagaagaaaaatgacgactttgaaagtttgacggtg
ttggaaggacatgaaaatgaggttaaatgtgtggcgtgggctccttcggggaacctcctg
gccacatgtagccgagacaagagcgtctgggtttgggaagtggatgaggaagatgagtac
gagtgtgttacagttgtgaactcccacacacaagacgtaaagcatgtcgcatggcacccg
aaccaagagctcctggcttcagccagctacgacaacaacatctgcatttacaaagaggaa
gatgatgactgggagtgtcgagccaccttacaaggacacacgtctacagtttggagtttg
tgttttgatgcaactggacagaggatggcctcctgcagcgatgaccgcactgtgaagatt
tggaaggaattccccggtgagagtggggacttatcctggaagtgtgtttgcactctgtct
gggtatcatggacgaactgtgtatgatattgcctggtgtcgactgaccggcgccctagcg
accgcctgcggtgacgacgcagttcgagtttttaaggaggaagcggcggccagtccagat
gagccggtgttctcactggctgctcaggagaccaaagctcacagccaggatgttaactgc
gtctcctggaacccgaaagaagccggacttctggcctcctgcagcgacagcggtgacatc
gccatttggaggttcaaagaagacgaatga

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