Nematolebias whitei (Rio pearlfish): 119414072
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Entry
119414072 CDS
T08042
Symbol
lrp13
Name
(RefSeq) very low-density lipoprotein receptor
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119414072 (lrp13)
Membrane trafficking [BR:
nwh04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119414072 (lrp13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF
EGF_CA
EGF_LRP2
EGF_2
EGF_Teneurin
hEGF
Motif
Other DBs
NCBI-GeneID:
119414072
NCBI-ProteinID:
XP_037537119
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Position
8:32735181..32741476
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AA seq
1297 aa
AA seq
DB search
MGGWVCLCLALLASYLQVVSAGSSLMKCNLGTTLCKDGSECIPYSHVCDGESDCKDGSDE
EDCESGCGDDQFQCAHGMKCIDKDHVCDGVPQCQDLSDEQHCMKQTEDCAHRCDKNRCLP
ASFICDGEKDCLDGTDEATCEDPDDVNAAPVPAPFGPSRPIRCSLGTKSCKDNSDCVHYD
HVCDGEADCRDGSDEENCLSECESNQFQCAHGKKCIEKVQVCDGVPQCQDRSDELECAKR
MEGCEHQCDDESRCIPSSFLCDGESDCSDGSDEATCGEQECSATEFRCASGQCVSASVRC
DGHPDCWDGSDEEACTKAPVCTTKHRCPQSKECLVQEWLCDGDQDCKDGSDEKDCPVAPL
ICGDFQWSCKSKTRCVPAAWRCDGMKDCDDGSDENECGTVTCLPHEFQCGSRECLNVGLV
CNGITNCADGSDEGGSCQTACAEDDSHCSQGCYSTPQGPRCRCADGYKLKEDGATCVDVN
ECEDKTPGECSHLCINTPGSYQCDCHPGFIMEARGRLCKITGEPFLLTSIQTELYLLGLR
SGSLDILSSTSKKAVLSLDYDWRDQKVFWVSVDTETIGWSSMDQKTTGILIKGVRADSVA
VDWLGRNLYWIDGVNSQIVAVRLAKTSVKSADRSVILDEDLDQPRSLALLPQKRLMFWTE
IGNVVKIERAGMDGSERRAVVNSSLGWPGGIAVDSISERIYWTDERLKAIGSSTLDGEDI
KILQMKETTNPFSVAVFNDMLYWSDAKKRTVQAANVSGKNRQTLLKRPGQPFAVKVIHPI
LQMNTDSPCKKTDCSHMCVLAPRLKAVCKCPSGLLLAEDGLTCSSRVSSTFLLLLSPSTV
SKVYLPSRQEAAELKGWPEHMALQIPNINEATIMDYSLQDNTLIITDDGTTSINSFKLKD
SVLISQRQLLKLDDAITAMALDWVTLNVYWSSKQPRLQVTSKSGAYTAVVIEDGISGVGC
IALHPPSGAMCYTNLDLQETSSKAVVECAHMDGAQRQAVHKDAVQPASLVFSSNGDTIFW
VDMGIGTINSVHVNGSGYKKLETVESVTAMAFGDDTLFWMTKSDMTRLWYRKDQQQKKLW
FEVGTQVISLKSFSKSSHSGSNPCAQNNGDCQHLCLATPSGRTCRCAHDYVAKGTKCTQQ
EGCSPGTRPCLDKTCLPETKFCDGHADCSDHSDENCGDLKPEPGSEVSPPIHPRGSSPHP
VSPEPDQDDLFTDLVNLIADQCNQNHCSGNGRCVETEGVVSCVCSEGYSGAACQDRAAKG
VQGPIIYGAAGLCAGIVVIAVIAVVLKKKGAETRLVI
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgggtggatgggtatgtctttgtctggcgttactggcatcatacttgcaagttgtttca
gctggaagcagtcttatgaagtgcaacctgggcactacactgtgcaaggatggctcagaa
tgcatcccctacagccatgtttgtgatggagagtcagactgtaaggatggctctgatgaa
gaagactgtgaatctggatgtggtgatgatcagttccagtgtgcccatggcatgaagtgt
atagacaaggaccatgtgtgcgatggtgttcctcagtgtcaggacctctcagacgaacag
cactgcatgaagcaaactgaagactgtgctcaccgatgtgacaagaatcgctgcctgcct
gcgagcttcatatgtgatggggagaaggactgtttggatggcactgatgaagctacctgt
gaggatccagatgatgttaacgcagctcctgtgcctgctccctttggcccatctcgtccc
atcagatgctctttgggcaccaaatcctgcaaagacaactctgactgtgttcactacgac
catgtctgtgacggggaggcagactgcagagacggctctgatgaggaaaactgcttatca
gaatgtgaaagtaaccagtttcagtgtgctcatggaaagaaatgcatagaaaaggtccag
gtgtgtgacggtgtacctcagtgtcaggaccgctcggatgaactggaatgtgccaagcgc
atggagggctgtgagcaccaatgtgatgacgagagccgctgcattcccagcagcttcctc
tgtgatggggagagcgactgcagcgacggcagtgatgaggcaacctgtggtgaacaagag
tgcagtgctacagagttcagatgtgccagtggccagtgtgtgtctgcctcagtgcgctgt
gacggtcacccagactgttgggacggctcggatgaggaggcctgcaccaaagcgccagtc
tgcactaccaaacaccgctgcccccaaagtaaggagtgtctggtgcaagagtggctttgt
gatggagaccaggactgcaaagatggctcggatgaaaaggattgtcctgtggctcctctg
atctgtggtgacttccagtggtcctgtaagtccaagactaggtgtgttcctgcagcctgg
aggtgcgatgggatgaaggattgtgacgatggcagtgatgagaatgaatgtgggacggtg
acgtgcctccctcatgagttccagtgtggcagtcgggagtgcttgaacgtgggtctggtc
tgcaatgggatcacaaactgtgcagatggttcagacgagggaggcagctgccaaacggcc
tgtgcagaagatgactcgcactgttctcaaggctgctacagcacaccacagggacctcgc
tgtcgctgtgcagatgggtacaagctgaaggaggatggggcgacctgtgtcgatgtaaat
gagtgtgaagacaagacgccaggggagtgcagtcacctgtgcattaatactccaggatca
taccaatgtgactgccatccaggcttcattatggaggcacgtggacgcctgtgcaagatc
acaggtgaacccttcctgctaacatcgatccaaacggagctctacttgttgggcttgcgc
agtggaagtctagacattttgtcatccacttccaaaaaggcagttttgtctctggactat
gactggagggatcagaaagtgttctgggtcagtgtggacacggagacgattggctggtct
tcaatggaccagaagaccacaggaatcctgataaaaggtgtcagggctgactctgttgct
gtggactggcttggtcgaaacctgtactggatcgatggtgtgaacagtcagatcgttgct
gtcagacttgcaaaaacctccgtgaaatctgcggacagaagtgtcatcttggatgaagac
ctggatcagcctcgctctctagccttgctgccacaaaaaaggctcatgttctggactgaa
attggtaatgtggtgaagattgagcgtgctgggatggatggatcagagaggagggcggtg
gtgaactctagtttaggctggcctggtggaattgcagtagactccatctctgaaaggatc
tactggacagacgaaagactaaaggccattggatcttcaacactggatggagaggatatt
aagattcttcagatgaaggagacaacaaatccgttctctgtggctgtattcaatgacatg
ctttattggtctgatgccaagaagaggacagttcaagctgctaatgtctctggcaaaaac
cgtcaaactctcctgaaacgaccaggacagccttttgctgtgaaagtaatccacccaata
ctccagatgaacaccgacagcccctgcaagaagactgactgttcccacatgtgtgtcctg
gctccaagactcaaagcagtctgcaagtgtccctctggtctcctgctggctgaggatggt
ttgacctgttccagtcgggtttcttcaacgttcctgctgctactgtctccctcaactgtc
tcaaaggtctatttgccatctcggcaagaagctgctgagttaaagggctggcctgagcac
atggcactgcaaatccccaacatcaatgaagccaccatcatggactacagcctgcaagac
aatactctgattataacggatgatggcacgacttcaatcaactccttcaagctgaaggac
tctgttctaatctcccagagacagcttctgaaactagatgatgccatcactgccatggcc
cttgactgggtgacccttaacgtgtactggagtagcaaacagccgcgccttcaggtcact
tcaaaatctggtgcttatacagctgttgtcattgaagatggaattagtggagttggttgt
attgcactccatcctcccagtggagccatgtgttacacaaatctggatctgcaggagacg
agcagcaaggctgtggtagaatgtgcccatatggacggtgcacagcgacaagccgtgcat
aaggatgcagtccaacctgcctctctggtcttttccagtaatggggatacaatcttctgg
gttgacatgggaataggaaccataaattctgttcacgttaatggatccggttataaaaag
ctggagactgttgaaagcgtgactgcgatggcttttggtgatgacactcttttctggatg
acgaagagtgacatgacgaggctttggtaccgcaaagatcagcagcaaaagaagttgtgg
ttcgaggttggaacacaagtgatcagcttaaaatccttcagcaagtccagtcattcaggt
tccaacccatgtgcccaaaacaacggagactgtcagcatctgtgcctcgccactccatca
ggtcggacatgcaggtgtgcccatgactacgtggcaaagggaacaaagtgcacccagcaa
gaaggctgttcacctggcacccggccatgtttggacaaaacctgccttcctgaaacaaaa
ttctgtgatgggcatgctgactgctctgaccactcagatgagaactgcggtgatctaaag
ccggagccaggttccgaggtctctcctcccatccaccctcgtggctcctctcctcacccg
gtttctccagaacctgatcaggacgacttgtttactgatcttgtgaacctgatagctgac
cagtgcaaccaaaaccactgcagtggtaacggccgctgtgtggagactgaaggagttgtg
tcatgcgtgtgttcagaaggctacagtggtgctgcctgtcaggatcgtgctgcaaaaggc
gtgcaaggtccaatcatctacggagcagcaggtctctgtgcagggattgtggtcattgct
gtaatagcagtggtgcttaaaaagaagggtgctgaaacaaggttggtaatctga
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