KEGG   Nematolebias whitei (Rio pearlfish): 119414207
Entry
119414207         CDS       T08042                                 
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
  KO
K06058  deltex [EC:2.3.2.27]
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    119414207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nwh04121]
    119414207
Enzymes [BR:nwh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119414207
Ubiquitin system [BR:nwh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119414207
SSDB
Motif
Pfam: DTC WWE zf-C3HC4 zf-RING_UBOX zf-RING_11 zf-rbx1 zf-RING_2 zf_RING_Vps8_fungal PHD_NSD zf_RING_Vps8 PTPRCAP zf-ANAPC11 zf-RING_Vps41 zf-UDP zf-C3HC4_2 PHD
Other DBs
NCBI-GeneID: 119414207
NCBI-ProteinID: XP_037537238
LinkDB
Position
1:28751284..28775782
AA seq 886 aa
MGNQTVLILACSLICLLLLLLFLYKKLNREADGEYTIRRIIYKEGGVRDQVRGAVTAVET
RLGIQLWPHSDEGEELQSIEEGQATGSQQGDDSNGEDDEDEDNEDQSGSSKEEEDDNKSC
SDSSEAGEQNRLMGEPDESDEMEENMEEKQEQQEKEQGKAEISGMKIDLKQFSGSVIWSD
EGGTLRPVRRSFYDPTSAPGQGCLWEWENDAGSWTAYDTEVGIAIQAACDRQQPCLDLAP
LGFCYLIDFENMTQINGQTQRCRRIQRRSDLAYPLVSGPLPRSHHAWGPMSMPGHGGLLG
VDVSSVGMGTMRMSSGGTGNGSAYPSGALPASAITSLGQPCACQQCMLMLSIKAGTMSTA
QTLGRRPLQIKPPSPKLSSYPFPGGAYSLTLPRPPSLSRSLSPHRTALVGATGGYSVAGT
GGGGGLGIIGAGGYSSTGFSFGGGFPHSLSLLGPATAALSISSNRPPPPTLPPPPPPPPP
PCTTPSSTTVLPPQPPPPSSLSVSCSAPTVPTPAPPLISTAASTCTPSPSARVLGPVSSS
GAAACAAPLPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGI
TGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGKTPEEVV
KRYLQKVRNPPEEDCTICMEALSGPSGYKGPGVGGISRAESVGRLAQCGHQYHLQCLVAM
YNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQ
GPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVI
WNEVHHKTEFGSNLTGHGYPDLGHLDNVLEELRAQGITEEECLPRE
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgggcaaccaaactgtgctgatcctcgcttgcagcttaatatgcctgttattgttgcta
cttttcctgtacaagaagttaaacagggaggcagatggcgaatataccatccgacgcata
atctacaaggaaggaggagtcagggaccaggtgagaggagcagtaacggctgtggaaaca
cgtcttggaatccagttgtggcctcacagcgatgaaggagaagagttgcagagtattgaa
gaaggacaggctactggtagccaacagggggatgactcgaatggagaagatgacgaagat
gaggataatgaggaccagagtggcagcagtaaggaagaagaggacgacaataagtcatgt
tcggatagctccgaagcaggggagcagaacaggctaatgggtgaaccagatgaaagtgat
gagatggaggaaaacatggaggagaagcaggagcaacaggaaaaagagcagggtaaagca
gaaataagtggaatgaagatagacctgaagcagttttctgggagcgtcatctggtctgac
gaaggaggtacccttcgacctgtacgacgtagtttctacgaccccacctcggcaccgggg
cagggctgtttgtgggagtgggagaacgacgccggcagttggacagcatacgacactgag
gtgggcattgccatccaggcagcttgtgatcgtcaacagccctgtctggacctggcacct
ctgggtttctgctacctcattgactttgaaaacatgacccaaatcaacgggcaaacgcaa
cgctgcagaagaatccagcgtcgctcagaccttgcttacccactggtttccgggccctta
cccaggtctcaccatgcctggggacctatgtccatgcccggccatgggggacttcttggc
gttgatgtttctagtgttggtatggggacaatgaggatgagcagtggtggaacaggaaat
ggaagcgcctatcccagtggggcccttcctgcctcagccatcacctctttaggacagcca
tgcgcatgtcagcagtgtatgttgatgctaagcatcaaagcaggtaccatgtcgactgcg
caaactctgggtcgaagaccgctacagatcaagccccccagtcccaaactaagcagttac
cctttcccaggaggtgcttactccttaacactccctcggcctccatcactgtcaagatct
ctgtcccctcacaggacggctttagttggagcaacgggtggctacagtgtagctggtaca
ggtggaggaggtggtttgggtattattggcgctgggggttatagcagtaccggcttcagt
tttggaggaggcttcccccactcgctttcccttctagggccagccactgctgctctctcc
atctcttcgaatcgtccacctcctcctactctcccaccccctccgcctccacctcctcca
ccctgcaccactccctcatcgaccaccgtcttaccacctcaaccccctcctccctcctcc
ctctccgtttcctgttctgctcccacagtacccaccccagccccacctctcatctccaca
gctgcctctacctgcacaccgtcgccttctgcccgggttctgggtccggtgtcttcatct
ggtgctgccgcctgtgccgcccctctaccgccacgatccagcctcgcaggtctgagccgt
cctgcattgcagcgtatcgccatggcccagtcacgagcacttatcgcctcaggagtgcca
acggttcccgttaagaacctgaatggatctagtcctgtacaccccgccctggcaggcatc
acgggcatcctgatgagcgcagcaggacttcctgtctgcttgacccggcctccgaagctg
gtgcttcatcctccgcctgtcagcaagagcgacatcaaacctgtgcccggcctgggccac
tgctgtcgcaagaccacaaagaaacaagcccggaaaggcaagacacctgaggaagtggtg
aagcgttatcttcagaaagttcgtaaccctccagaggaggactgcaccatctgcatggag
gcgctgtctggaccgtcgggctacaagggtcctggcgtaggcggcatctcccgggctgaa
tcggtgggccgcctggcgcagtgtggtcaccagtaccacctccagtgcctcgtcgccatg
tacaacaatggcaacaaggacggcagcctgcagtgtcccacctgcaaaaccatttacgga
gtcaagactggcaatcagccccccggcaagatggagtaccacgtcatccctcactctctg
ccgggtcatcccgactgcaaaaccatccggatcatctacaacatccctcctggcatccag
ggtcctgagcacccaaatccaggaaaaccgttcaccgcacgtgggtttcccagacactgc
taccttcctgacagcgagaaggggcgcaaggtcctgaggctgcttctggtggcgtgggac
cgcaggctcatcttctccgtgggtacgtccagcactaccggcgaatccgacacggtcatc
tggaacgaggtgcaccacaagaccgagttcggctccaacctcacgggccacggctacccc
gacctgggccacttggacaacgttctcgaggagctgagggcccaggggatcaccgaggag
gagtgtctacccagagaatga

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