Nematolebias whitei (Rio pearlfish): 119414207
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Entry
119414207 CDS
T08042
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119414207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119414207
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119414207
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119414207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-RING_2
zf_RING_Vps8_fungal
PHD_NSD
zf_RING_Vps8
PTPRCAP
zf-ANAPC11
zf-RING_Vps41
zf-UDP
zf-C3HC4_2
PHD
Motif
Other DBs
NCBI-GeneID:
119414207
NCBI-ProteinID:
XP_037537238
LinkDB
All DBs
Position
1:28751284..28775782
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AA seq
886 aa
AA seq
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MGNQTVLILACSLICLLLLLLFLYKKLNREADGEYTIRRIIYKEGGVRDQVRGAVTAVET
RLGIQLWPHSDEGEELQSIEEGQATGSQQGDDSNGEDDEDEDNEDQSGSSKEEEDDNKSC
SDSSEAGEQNRLMGEPDESDEMEENMEEKQEQQEKEQGKAEISGMKIDLKQFSGSVIWSD
EGGTLRPVRRSFYDPTSAPGQGCLWEWENDAGSWTAYDTEVGIAIQAACDRQQPCLDLAP
LGFCYLIDFENMTQINGQTQRCRRIQRRSDLAYPLVSGPLPRSHHAWGPMSMPGHGGLLG
VDVSSVGMGTMRMSSGGTGNGSAYPSGALPASAITSLGQPCACQQCMLMLSIKAGTMSTA
QTLGRRPLQIKPPSPKLSSYPFPGGAYSLTLPRPPSLSRSLSPHRTALVGATGGYSVAGT
GGGGGLGIIGAGGYSSTGFSFGGGFPHSLSLLGPATAALSISSNRPPPPTLPPPPPPPPP
PCTTPSSTTVLPPQPPPPSSLSVSCSAPTVPTPAPPLISTAASTCTPSPSARVLGPVSSS
GAAACAAPLPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGI
TGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGKTPEEVV
KRYLQKVRNPPEEDCTICMEALSGPSGYKGPGVGGISRAESVGRLAQCGHQYHLQCLVAM
YNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQ
GPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVI
WNEVHHKTEFGSNLTGHGYPDLGHLDNVLEELRAQGITEEECLPRE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaccaaactgtgctgatcctcgcttgcagcttaatatgcctgttattgttgcta
cttttcctgtacaagaagttaaacagggaggcagatggcgaatataccatccgacgcata
atctacaaggaaggaggagtcagggaccaggtgagaggagcagtaacggctgtggaaaca
cgtcttggaatccagttgtggcctcacagcgatgaaggagaagagttgcagagtattgaa
gaaggacaggctactggtagccaacagggggatgactcgaatggagaagatgacgaagat
gaggataatgaggaccagagtggcagcagtaaggaagaagaggacgacaataagtcatgt
tcggatagctccgaagcaggggagcagaacaggctaatgggtgaaccagatgaaagtgat
gagatggaggaaaacatggaggagaagcaggagcaacaggaaaaagagcagggtaaagca
gaaataagtggaatgaagatagacctgaagcagttttctgggagcgtcatctggtctgac
gaaggaggtacccttcgacctgtacgacgtagtttctacgaccccacctcggcaccgggg
cagggctgtttgtgggagtgggagaacgacgccggcagttggacagcatacgacactgag
gtgggcattgccatccaggcagcttgtgatcgtcaacagccctgtctggacctggcacct
ctgggtttctgctacctcattgactttgaaaacatgacccaaatcaacgggcaaacgcaa
cgctgcagaagaatccagcgtcgctcagaccttgcttacccactggtttccgggccctta
cccaggtctcaccatgcctggggacctatgtccatgcccggccatgggggacttcttggc
gttgatgtttctagtgttggtatggggacaatgaggatgagcagtggtggaacaggaaat
ggaagcgcctatcccagtggggcccttcctgcctcagccatcacctctttaggacagcca
tgcgcatgtcagcagtgtatgttgatgctaagcatcaaagcaggtaccatgtcgactgcg
caaactctgggtcgaagaccgctacagatcaagccccccagtcccaaactaagcagttac
cctttcccaggaggtgcttactccttaacactccctcggcctccatcactgtcaagatct
ctgtcccctcacaggacggctttagttggagcaacgggtggctacagtgtagctggtaca
ggtggaggaggtggtttgggtattattggcgctgggggttatagcagtaccggcttcagt
tttggaggaggcttcccccactcgctttcccttctagggccagccactgctgctctctcc
atctcttcgaatcgtccacctcctcctactctcccaccccctccgcctccacctcctcca
ccctgcaccactccctcatcgaccaccgtcttaccacctcaaccccctcctccctcctcc
ctctccgtttcctgttctgctcccacagtacccaccccagccccacctctcatctccaca
gctgcctctacctgcacaccgtcgccttctgcccgggttctgggtccggtgtcttcatct
ggtgctgccgcctgtgccgcccctctaccgccacgatccagcctcgcaggtctgagccgt
cctgcattgcagcgtatcgccatggcccagtcacgagcacttatcgcctcaggagtgcca
acggttcccgttaagaacctgaatggatctagtcctgtacaccccgccctggcaggcatc
acgggcatcctgatgagcgcagcaggacttcctgtctgcttgacccggcctccgaagctg
gtgcttcatcctccgcctgtcagcaagagcgacatcaaacctgtgcccggcctgggccac
tgctgtcgcaagaccacaaagaaacaagcccggaaaggcaagacacctgaggaagtggtg
aagcgttatcttcagaaagttcgtaaccctccagaggaggactgcaccatctgcatggag
gcgctgtctggaccgtcgggctacaagggtcctggcgtaggcggcatctcccgggctgaa
tcggtgggccgcctggcgcagtgtggtcaccagtaccacctccagtgcctcgtcgccatg
tacaacaatggcaacaaggacggcagcctgcagtgtcccacctgcaaaaccatttacgga
gtcaagactggcaatcagccccccggcaagatggagtaccacgtcatccctcactctctg
ccgggtcatcccgactgcaaaaccatccggatcatctacaacatccctcctggcatccag
ggtcctgagcacccaaatccaggaaaaccgttcaccgcacgtgggtttcccagacactgc
taccttcctgacagcgagaaggggcgcaaggtcctgaggctgcttctggtggcgtgggac
cgcaggctcatcttctccgtgggtacgtccagcactaccggcgaatccgacacggtcatc
tggaacgaggtgcaccacaagaccgagttcggctccaacctcacgggccacggctacccc
gacctgggccacttggacaacgttctcgaggagctgagggcccaggggatcaccgaggag
gagtgtctacccagagaatga
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