KEGG   Nematolebias whitei (Rio pearlfish): 119414515
Entry
119414515         CDS       T08042                                 
Symbol
focad
Name
(RefSeq) focadhesin
  KO
K27498  focadhesin
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nwh03019]
    119414515 (focad)
Messenger RNA biogenesis [BR:nwh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     119414515 (focad)
SSDB
Motif
Pfam: Focadhesin DUF3730
Other DBs
NCBI-GeneID: 119414515
NCBI-ProteinID: XP_037537542
LinkDB
Position
1:complement(7227312..7406654)
AA seq 1643 aa
MTEGLKTRFDFSSPVIQAQAVRNLVAAVLKEKGSNGQITQSSTQGPALEVLWQQCCSDCA
PVRSACCDAVVLLADQGHADLHYILNTVLNLLPSARNVQGLIKVIGRLLQMQADQRNEES
RFTCPYSIRSSPHPFITSLENRADCWPALLLEIDDFTRQAVDRNKTSYITMLAPFLRYLY
CEPQRQPQHALLRQSLLRVLVLSKSGAGLPSASAVSGNLLLSLCQLVPHLQLDDVEAVLE
LCGFVDALLQGLLRVSGESWTRERVGLLLQLLCACQRCLKLNGDCRPLLDLMQQLLPACQ
QDLPADELMMGVALLLLEAPAAQQSNLLSLALSLVPEQDELSSWLSPVLLLPVLQLLTCS
GLTEPLADPKTNTLNSNLAHSLLQSIGKPTDKPRQPGPVLALPLSSWYSELSVALSILRN
VVHDPSAAAEWLLAVNSSLTSSQRLSPSLTLIVTHLLITGEEGVCQLALNVMQAIAAADP
CQVPSMVPVLLFKLSQEKNPSLSLAVLSCLPSLGTHKLCIPMVLQNLHMLAAAPKLRAVA
LRLMTALWKKQDRVYPELQRLLGQLESRGVVGRDTQWELILARAACLRDICRERPYQHGG
DMLAAISLTLKQSDRPDLATPAALALQGLQELCRAEVVDLISTWKSLGPELSRDARPLVV
KAIAELLSLVPQLTVKSEEYEKLKDEVVAFLWSYTTNKDAEVASCGYKALAAFPEPVHTI
LHLPETARPAVKMCGSEEDDDEKENEEEEKDLSVPGSSYVKLMALTSISVLPAFELLLTS
LVKQEMSQMPRGVYFSALRGGALRSDQGKTVAGIPTFMLKTYEKNKQPGLKPGLAAGLLL
CYELPVQTDRTGRPIERFLVSRSRSYQQTLTALIHEVNIQPSEWHRALLLPQAWRGFMSR
TFHAVLQGRRADLEMQQKQAKENPQELQYRQHCAWLWTRDQLADVIKTATKDSPVVQGNS
ILALSGLAAVLAKYENNLPTDGNGSLGAGPEFVPTASWLSMVLDTLLSIISSSYKASGQV
FSWFLHRSYSGENTASAIARSCASLALSLLVPVLVVWQRDSLVQVVSALKAGLPDSPTAD
DSQAIQFHSGLALGTVLSSLQRQRISDVSAQKDTDLLFSSLKALESCSFNPNLEYNTGCV
LGLGLVLSALCSSGELDHHVLISQALDKLLANLQDSSSGHGRMLQEVLSYSVACVGVSAF
SAGLIDASKAEEIISSLRTLTEESQQTPGFSLALGLVVHGLSVSGHGKAEELHPRLLAAW
IKILLAEGCPTMQRLAAANGLVALVGSESYLIQLKDELDLSSQQQSRLNEVIRAMTQIIT
FSGAIGLQSNSACLVGHLYLAHVSTSHSHTAVPQDFTYLSEKSVIRSIMDFITEAGKKGP
EFSHPAWVKTALTSLASVGLNFQFPPVNWSAVLSPLMRLSFGEDVQHQCVVLAASQAQSS
QSASLFLGSWLSPPLVHSLGLQTRAHLYETLGLWMKHVAEDKLQVYVETVGLQQFQDDLR
PQRLSLCRSLLQGLAQAMALPNPPNHCWTILCSTAEKIFSLLPNQIQDTEVDLYEGVSKC
LSELSDTEIDRITRVSEANMEKACFVLAYLTSRGRVPLLSLNDVIAGVVRGWPSRRVGWL
LLQCLYQSRLATSANTGQTKTEF
NT seq 4932 nt   +upstreamnt  +downstreamnt
atgactgagggtttgaaaacacggttcgatttctccagccctgtcatacaagcccaggct
gtgagaaatcttgttgctgctgtcttaaaggaaaaaggatcaaatgggcaaatcactcag
tcttccactcagggtccggcgttggaggttctgtggcagcagtgctgcagcgactgcgca
cccgtacgttcggcctgctgcgacgctgtggtgctgttagcggatcagggccacgcagat
ctgcactacatcctcaacactgtcctcaatctcctgccttctgccagaaatgttcagggc
ctaataaaagtcatcggacgactactgcagatgcaggctgatcagagaaatgaggaaagt
cgtttcacctgtccttactccatcaggagcagtcctcacccattcatcacatccctggag
aaccgagcggactgctggccagctttgctgctggagattgatgactttacccgacaggct
gttgacagaaataaaacatcttacatcaccatgctggctcccttcctccggtacctgtac
tgtgaacctcagaggcagccccagcatgcacttcttcgacagagtctgctcagggtgttg
gtcctctcaaagtctggagctggattaccgtcggcctcagcagtctctggcaacctgctg
ctctccctttgtcagctggtgccacacctgcagctggacgatgtggaggcagtcctggaa
ctgtgtgggtttgtggacgctctgcttcaaggcctcctcagggtttcgggagagtcctgg
acccgtgagcgagtgggactgctgctgcagctgctctgtgcatgccagcggtgcctgaag
ttaaacggagactgtcgaccgctcctcgacttgatgcagcagctcctgcccgcctgccaa
caggacctgccagctgatgagctgatgatgggtgtggccctgctcctgctcgaggccccc
gctgctcagcagagcaacttacttagtctagctttgagtttagtccctgagcaggacgag
ctgtcctcctggttgagtccggtcctgctccttcctgtgctccagctgctcacctgttcg
ggcctcaccgagccactggccgacccaaagacaaacaccctgaacagtaacctcgcccac
agcctgttgcagagcatcggcaaacctacagataagcctcgacagcccggcccagtattg
gcgctccctctcagctcctggtacagtgagctcagcgtggctttgtccatacttcgcaac
gtggtccacgatccatcagcggctgctgaatggctgctggccgtgaactccagcctgacg
tccagccagcgcctctcaccctccctcacactcatcgtgacccatcttctcatcacgggt
gaggagggtgtttgccagctggctctgaatgtgatgcaggccattgctgctgctgatccc
tgccaggtcccctccatggttcctgtcctgctcttcaaactgtctcaggagaaaaacccg
tctctctctcttgctgtgctcagctgcctgccgagcctcgggactcataagctctgtatc
cccatggtgctgcagaacctccacatgctggctgctgcccccaagctgagagctgtagcg
ctgcgtctcatgactgctctctggaaaaaacaggatcgagtgtacccagagctgcaacgt
ctgctgggccagctggagtccaggggagtggtggggagggacacccagtgggagctgatc
ctggcccgggctgcctgtctcagggacatctgcagagagaggccctaccagcacggaggg
gacatgttagctgccatttcactcactctgaagcagagcgaccgaccagacctggccacg
cccgctgctctcgccctgcagggtttacaggagctgtgcagagcagaggtagtggacctg
atctcaacgtggaaaagccttggacctgagctgagtcgagacgcccgtccactggttgtt
aaagccatagctgagctgctgtcgctggttccccagctcactgtgaagtcagaggagtat
gagaaattaaaagatgaggtggtcgcctttctctggagttatactacaaacaaggatgca
gaggtggccagctgtggctacaaagctttggcagcttttcctgaaccagtgcacaccata
cttcacctccctgagacagctagaccagctgtgaagatgtgtggaagtgaagaagatgat
gatgagaaggaaaacgaggaagaggagaaggatctgtcagtccctggttcatcttatgtg
aaactgatggctctaacctccatctcggttctaccagcctttgagctcctcctgacctcg
ctggttaaacaagagatgagtcagatgcctcgaggagtctacttctccgctctgagaggg
ggtgcgctgcggtcagaccaagggaagacggttgcagggatcccgaccttcatgctcaaa
acctacgagaaaaacaagcagcctggcctaaagcccggcctggcagctggtctgctgctc
tgttacgagcttcctgtgcagacggaccgcacaggaaggccaatcgagcgttttctcgtg
agccgaagccgcagctaccagcagaccctgacggcgctcattcacgaagtgaacattcag
ccgtccgagtggcaccgggctcttctcctgccccaggcatggaggggcttcatgagccgg
acgttccacgccgtcctgcagggtcgacgagctgatctggagatgcaacagaagcaggcc
aaagagaacccccaggagctgcagtacagacagcactgtgcctggctgtggaccagagat
cagctggcagatgtcatcaaaactgctacaaaggacagtccagttgttcagggaaactcc
atcctggctctgagtggtctggctgctgtcctcgcaaagtatgagaacaacctgcccact
gatggcaacggcagccttggagctggaccagaatttgttcctactgcaagctggttgtcc
atggttctggacactctgctcagcatcatcagcagcagctacaaggccagtgggcaagtc
ttctcctggttccttcatcgctcatattcaggtgagaacacagcgagtgccatcgctcgc
tcctgtgccagcctggccttgtctctactcgtcccagtgttggtggtctggcagagggac
agtctggtccaggttgtctcggcgctgaaggccggcctgccggactctcccactgccgat
gactcgcaggccattcagttccattcaggccttgccctcggcacggtgctgtccagcctg
cagcgccaacgcatcagtgacgtctccgcgcagaaggacacagatcttctcttcagctct
ctgaaagctctggagagttgctcctttaaccccaacctggagtacaacaccggctgtgtg
ttgggtctgggtctcgtgctctcagccctctgcagcagtggggagctggaccatcatgtc
ctcatcagccaagcgcttgacaagctgctggccaacctgcaggacagcagcagtgggcat
ggacgcatgctgcaggaggtgttgtcttactccgtcgcctgtgtgggcgtctctgccttc
agtgcaggtctgatcgatgcgtcgaaagctgaggagatcataagctctctgcgcaccctg
accgaggagagccagcagactccagggttctctctggctctggggttagtagtccatgga
ctgtctgtgtcgggccacggtaaagctgaggagctccaccctcgtctactggctgcctgg
atcaaaatcctcctagcagagggttgtcccacaatgcagcggctggctgctgccaacggt
ctggtggctctggttggatcggagagttacctcatccagctgaaagatgagctggacctt
tcctcccagcagcagagcagactgaacgaggttattcgggccatgacacagatcataacc
ttttctggagccattggtttgcagtccaacagtgcctgtttggtcggccatttgtacctg
gcccatgtttccaccagtcacagtcacacagcagttcctcaagatttcacatacctctca
gaaaaaagcgtcatcaggtccatcatggacttcatcacagaagctggcaaaaaaggccca
gagttttctcatcctgcttgggtgaagacagcactgacctcactggcttcagttggactc
aacttccagttccccccagttaactggagtgctgtcctgtcgcctctaatgaggctgagt
tttggagaggatgttcagcatcagtgtgtggtgttggcagcgtctcaggctcagtcttct
caaagtgcttccctctttctgggctcgtggctgtcaccccctcttgtgcatagtcttggt
ctccagacccgagcccacctgtacgagaccctgggcctgtggatgaagcatgtggctgag
gacaagctccaggtgtatgtggagactgtgggcctgcagcagttccaggatgacctccga
ccccagcgactgtctctgtgccgctctttgctgcagggccttgctcaggcaatggccctc
ccaaaccccccaaatcactgttggaccatcctctgctccactgctgaaaagatcttcagc
ctcctacccaaccagatccaggatactgaagtggatttgtatgagggtgtctccaagtgc
ctgtcggagctgtctgatactgagatcgacaggatcactcgggtttctgaggctaacatg
gagaaggcctgctttgtcctggcatacctgacctctcggggcagagttcccctcctcagc
ctcaatgatgtcatagctggggtggtccgtggttggccgagtcgcagagtgggatggctc
ctcctgcagtgtttgtatcagagccgcctggccactagcgccaacacaggtcagaccaaa
acagagttctga

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