Nematolebias whitei (Rio pearlfish): 119414541
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Entry
119414541 CDS
T08042
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nwh01009
]
119414541 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119414541 (rpap2)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
119414541 (rpap2)
Protein phosphatases and associated proteins [BR:
nwh01009
]
HAD phosphatases
Fcp/Scp phosphatases
119414541 (rpap2)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119414541 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
119414541
NCBI-ProteinID:
XP_037537563
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All DBs
Position
9:28354120..28378908
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AA seq
625 aa
AA seq
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MESAERRSLAKTPRKGGKPKALTAEEEARRREAVKERLREKLELERRALQVVERLLEDRV
TEDFLTDCAKFITFTNYKDTVEERFISKLCGYPLCPNKLGKIPTQQYKISTKTNRVYDIT
ERKCFCSNFCYKASKEFELQISKTPLWLRKHESPPDITLLKKGDGGSSGEEVMLSERRLK
EDDVENPQAAPPENLHGSLETSTGGDSSDGEQEQDFDPTVVSQQDKPRVHWCDQLERSDQ
DRKVERRKRQDRENKQNEHRQTHSAEKENVLRGEKERKEPDAGKLHTAVQEQRDSSKDQS
LEEATEKINECNLSKVIPNTHPEAEDTPTSAAATGTEPSPGSKHGSSTTLTAGLSITQVG
MSRRGADCLRDLLRNHAGESKRDSVRLNLLECLRRTLKEWCTEETLQFLYGDDHSPVSSF
VDVKQEELDEDDLDDDVTVAGELKRPSAAAPDYEMLRRRTEELELRVREFYKGTWVLPEE
EQELNGNKRDTVQDQITKDPALPLIDCHAQHLIQKRIVVEKLNSCLRTVVGPLGLTLSEI
STDLNNLVRTFRFTNTNIIHRTPEWTLVAVVLLHMLSAVSPVVLQALETSASLQYLNTLM
EELSLQEQDLLSLVQMFKSPPHPHQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggcagaaaggagaagtttggcaaagacccccaggaagggagggaaacctaaa
gctctcaccgccgaagaagaagcgagacggagagaggcagtgaaggaaaggctgcgggag
aagctggagctggagaggagagctctgcaggtggtggagaggctcctggaggacagggtg
accgaggacttcctgactgactgtgcaaagttcatcacttttaccaattataaagacact
gtggaggagagattcatctctaaactgtgtggttatcctttatgtccaaataaacttggc
aagatccccacacagcagtacaaaatatccaccaaaacaaaccgagtgtatgacatcacg
gagcgcaagtgtttttgtagcaacttctgttataaagcctctaaagagtttgagctgcaa
atatcaaagacaccactttggctcaggaaacatgaaagccctccagatataacgttgctg
aagaaaggagatggtgggagctctggtgaggaggtgatgctgtcagagaggcgactcaaa
gaggatgacgtcgagaacccgcaggccgctccacctgaaaaccttcatggctctctggaa
acctccacaggaggtgacagcagcgacggggaacaggagcaggactttgaccccactgtg
gtctcccagcaggacaaaccccgcgtgcactggtgtgatcaactggaacgctcggatcaa
gacagaaaagtggaacgaaggaagagacaggacagagaaaataaacaaaatgagcaccgt
caaactcacagcgcagaaaaagaaaacgtgttaagaggcgagaaggaaagaaaagagccg
gacgctggaaaacttcatacggcagtgcaagaacagagagactcctctaaggaccaaagt
ctggaagaagccacagaaaagataaacgagtgtaatttgtcaaaggtcattcctaacacg
cacccagaggcagaagacacgcccacctctgctgcagcgacaggaactgaaccctcacca
ggaagcaaacatggctcttctacaactctgactgcaggactcagcatcacccaggtgggt
atgagcaggagaggagcagactgcctgcgagatctgctgaggaaccacgctggagaatcc
aaacgggactcggtgcgacttaatcttctggaatgtctgaggagaacactaaaggaatgg
tgcacagaggagaccctccagttcctgtacggtgatgatcattcaccagtttcctccttc
gtcgatgtgaaacaggaggagttggacgaagatgatctggacgatgatgtaactgttgct
ggagagctaaagaggccatcagctgcagctccagactatgagatgctgcggaggcggacg
gaagagctggagctccgagtcagagagttttataaagggacgtgggttctgcccgaggag
gagcaggagctgaacgggaacaagcgagatacggttcaggaccagatcacgaaggatcca
gctctgcctctcattgactgtcacgcccagcacctcatccagaaacgaatcgtggtggag
aagctcaacagctgtctcagaaccgttgtaggtccactgggtctcaccttgagcgagatc
tccactgacctgaacaatctggtccggacctttaggttcaccaacacaaacatcatccac
agaactcctgagtggaccctggtagctgtggtgctcctgcatatgttgtcggcagtgtct
ccggtggtgctgcaggccttggagacgtcggcgtcgctgcagtacttgaacacactgatg
gaggagctcagcctgcaggagcaggaccttctcagcttagtccagatgttcaaatctcca
ccacacccacaccagtag
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