Nematolebias whitei (Rio pearlfish): 119414560
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Entry
119414560 CDS
T08042
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119414560 (irf4a)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119414560 (irf4a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
119414560
NCBI-ProteinID:
XP_037537584
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Position
9:complement(29374641..29383737)
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AA seq
464 aa
AA seq
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MNLDEDSGVSVSCGNGKLRQWLIEQIDSGRYPGLVWENDEKTIFRIPWKHAGKQDYNREE
DAALFKAWAMFKGKHKEGVDKPDPPTWKTRLRCALNKSNDFDEIVERSQLDISEPYKVYR
IIPEGTKKGMKTSRLEETPSHVNALGYIPHFASLHNQVPSFMVSQERRDWSDYHVTPEQQ
SLSNSRPHGQHAELQYGQCHYQPSIGRVWPSSHTENGFQLSFHTYFSDSQPPMYAIDHNN
TIPDFSLHVSLYYRESLVKEVTITNPEGCRITSSSASSPSSSSSSSSPCSEDKFHSGAEI
VLFPAPYPESQRQGAEMLPNILEKGVLLWMTADGLYAKRLCQGRVYWEGPLSPHLDKPNK
LEKDQPCKLFDTHQFLIEVQDFAHNGRHLPRHQVVLCFGDEYPDPQRSRKLITAQVEPVF
AKKLVYYYQQNSGHYLRAYDHIQEQNATPSIDYASQRPLQHIQE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggatgaagacagtggtgtgtccgtcagttgcggcaatggcaagctgagacag
tggctgatagaacagattgacagcgggcgatatcctggcctggtttgggagaatgatgag
aaaaccatcttcaggattccttggaaacatgcgggaaagcaagactacaacagagaagag
gatgctgccctcttcaaggcatgggcaatgtttaaaggaaaacataaagaaggtgtagac
aaaccagacccccccacatggaaaaccagattacgctgcgccctcaataaaagcaacgac
tttgatgaaatcgtggaaagaagccagctggacatctcagaaccatacaaagtttacaga
atcatcccagagggaaccaaaaaggggatgaagacgagtcgtttggaagagacaccctca
cacgttaatgcacttggctacattcctcattttgcatcactgcacaaccaggtgcccagc
tttatggtttctcaggagagaagagactggagtgattaccatgtcacgccagaacaacag
tctttgtctaactcacgtccccatgggcaacatgcagagctgcagtacggacagtgccac
taccaaccatcaatcgggcgggtttggcccagttcacacacagaaaatggttttcagctc
tcattccacacctacttttccgactcccaaccacccatgtatgcaattgaccacaacaac
acaataccagatttcagcctgcatgtgtccctatactacagagaatccctagtgaaagaa
gttactatcaccaacccagaaggttgccggatcacctcctcctctgcatcctctccatcc
tcctcctcctcctcatcttctccttgttcagaggacaagtttcacagtggtgcagaaatt
gttctttttccagcaccataccctgagtcccaaagacagggggctgagatgcttcccaac
atactggagaaaggggtgcttctgtggatgacagctgacgggctgtacgctaaacgcttg
tgtcaaggacgagtatactgggaaggacctctgtctccacacctggacaaacccaacaag
ctggagaaggatcagccatgtaaactgtttgacacccatcagttccttattgaggttcaa
gattttgcccataatggccgtcatctaccacgacaccaggtggttctgtgttttggagat
gaataccccgatccgcaacgttccaggaaattaatcacagcacaggtggagcctgttttt
gccaagaagttggtgtattattatcagcagaactcaggtcactacctgcgggcctatgat
cacatccaggaacagaacgccactccatcaatagactatgcctcccagagacctctgcaa
catattcaggagtga
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