Nematolebias whitei (Rio pearlfish): 119414572
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Entry
119414572 CDS
T08042
Symbol
gpc1b
Name
(RefSeq) glypican-1b
KO
K08107
glypican 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nwh00535
]
119414572 (gpc1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nwh00537
]
119414572 (gpc1b)
Proteoglycans [BR:
nwh00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
119414572 (gpc1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nwh00537
]
Others
119414572 (gpc1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
SWT1_3rd
Motif
Other DBs
NCBI-GeneID:
119414572
NCBI-ProteinID:
XP_037537598
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Position
9:33194923..33262387
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AA seq
549 aa
AA seq
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MDSFILVLALCSLTAPACADKGSSKARSCSNFRTFYKGKLFPMDGVPQSEISGEHLHICP
QGYTCCTSVMEDNLALLSSREMEAVLKNTSRSLQVSLAGQRKAFDGYALEMLNRSLISLQ
ETFTSTWGLVYFENSQVFSDLYQDLSDYYKGSTTNVNMEEVLNEFWIKLMEKLFYTANKP
NSIGEDYLDCVSKQIETLRPFGDTPRKMTLEVTHTFVAARSFLQGLVISEDVVRKVSQVQ
LSKDCKKAIMKMTYCPHCHGMVFAQPCANYCHNVMKGCLANHADLNPEWTRLADTMIEVA
KNRLEDMDSVILSLPNRISEAMFTMMENIGTINSKVFPACGNLRKEGSGSSGVEEIMKSG
RVTVEDRLGGSSSKMSKLLSNVTTRLKDMRSYWISLPRIFCSDRAARGAGAEDKCWNGIS
RARYLPDVMGDGLASQINNPEVEIDITKPDMMIRRQIMQLKIMTHRLKNALNGYDVDFQD
TSDDVSGSGSGTCADETCSRGPRIIIPISDRPTLYIYPPENEKVKGSAQQNLSSVITHLL
SLLILLLQR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggattccttcatcctagtgctggcactgtgctctctaacggcaccagcctgcgcggac
aaaggctccagcaaagcccggagttgctctaattttcgaacattttacaaggggaaatta
ttccctatggacggtgtccctcagtcggaaatatcaggggagcatctgcacatttgtcct
cagggttacacctgctgtaccagtgtcatggaggacaacctggccttgctgagcagcagg
gagatggaggcagttttaaaaaacaccagccggtccttacaagtctcgcttgctggacag
cgcaaggcctttgatggctacgcacttgagatgctgaaccgctccctgattagccttcag
gaaactttcacttcaacgtggggccttgtgtattttgagaattcccaggttttctccgac
ctatatcaggatttatcagattactacaaaggctctactaccaacgtcaacatggaagag
gtgctcaatgaattttggatcaagctgatggagaagctattttatacagcaaacaagcca
aattcaataggtgaagattacctggactgtgtgtcaaagcaaattgaaacgctacgacct
tttggagacacgccccgtaaaatgacgctagaggtcacgcatacgtttgtggcggcacgt
tcgttccttcagggactggtgatcagtgaagacgtggtgcgcaaagtgtcacaggttcag
ctaagcaaggactgcaagaaagccatcatgaagatgacctactgtccccactgtcatggc
atggtctttgctcagccgtgtgccaactactgccacaacgtcatgaagggctgtctagcc
aaccatgctgacctcaaccctgaatggacccgtctagcagatacaatgatcgaggtggcg
aagaatcgcttggaagacatggatagtgtgatcctttccctcccaaatcgcatatcagaa
gccatgttcaccatgatggagaacattggcaccatcaacagcaaggtctttccggcttgt
ggcaacctgaggaaagaaggatccggcagctccggagttgaggagattatgaagagtgga
agggtcacagtggaggacaggttgggagggagctcaagcaaaatgtcaaagctgctgtct
aatgtcaccacaagactgaaagacatgcgatcatactggatttctctaccgaggattttc
tgcagcgacagagcagcacgtggtgcaggggctgaggataagtgctggaacggcattagc
cgggccaggtatctccccgacgtgatgggcgatggtctagccagtcagatcaacaatccc
gaagtggaaattgacatcacaaaaccggacatgatgatacgtcgacaaatcatgcagcta
aagatcatgacccaccgcttgaagaatgctctcaatggctatgatgtggactttcaggac
acaagtgatgatgtcagcggatcaggaagtggtacatgtgcagatgaaacgtgctcccga
ggaccacgcatcatcatccccatcagtgaccggcccactctttatatctacccaccagaa
aacgagaaagtgaaaggctcagcccagcagaacctttcttctgtcatcactcacctactt
tcactgctcattttgctgctccagcgataa
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