Nematolebias whitei (Rio pearlfish): 119414639
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Entry
119414639 CDS
T08042
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04145
Phagosome
nwh04814
Motor proteins
nwh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119414639
09142 Cell motility
04814 Motor proteins
119414639
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119414639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119414639
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119414639
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
119414639
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
119414639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Nbas_N
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
119414639
NCBI-ProteinID:
XP_037537669
LinkDB
All DBs
Position
9:complement(36389512..36396883)
Genome browser
AA seq
632 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDTKRGAEGGSSMGSEDSDLERKR
REAEALLQSVGITPDIPHVPAPMSPSNKSVGSDAGSQDSGDGTAGPRTLHWDPDPSTLQL
HSDSELMGCGPVRLGMSKLTQVDFVPRETVSYSKETQTPTEALSHSDQKADEEEDEEISA
PPPTEDTQEDVDEHGEMQDDDTPKELTEEEKLQVLHSDEFLSFFERGSRIVERALSEQVD
VCFDYSGRDLEDKEGDLQAGAKLVLNRQFADERWTKNRVVTCLDWSPQYPELLVASYNNN
EDAPHEPDGVALVWNMKYKKATPEYIFHCQSEVMSAGFAKFHPNLVVGGTYSGQIVLWDN
RSNKRTPVQRTLLSAAAHTHPVHCVSVVGTQNANNLISISTDGKMCSWSLDMLSQPQDSL
ELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKAGITEVFEGHHGPVTGL
SCHSAAGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSCDYVYDAMWSPTHPALFAC
VDLSGRLDLWNLNNDTEVPTASVCVDGSPALNRVRWSHSGKEIATGDSEGQVQVYDVGEQ
ICVPKADEWTRFVRTLAEINENRDEAEELANV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataagagtgaactgaaggctgagctggagagaaagaaacaacgaatcgctcag
attcgagaggagaagaagaggaaagaagaggagaaaaaaaagaaggatggggacacaaag
cgtggagctgagggaggctcctccatgggcagtgaagactctgatctggagaggaagagg
agggaggcggaggctttgctgcagagtgttggcatcaccccagatatacctcacgtccct
gcccccatgtctccctccaacaaatcagtgggcagcgatgcaggaagccaggactctggg
gatggaaccgcaggaccaaggactttgcattgggatcccgacccctctactctgcaactc
cactccgactctgagctgatgggatgtggacctgtgaggctcggcatgtccaagctgacc
caggtggattttgtcccacgggaaactgtgtcctactcgaaagaaacgcaaacccccaca
gaggctttgtcccactctgatcaaaaagcagatgaagaagaagatgaagagataagcgct
cccccgccgacagaggacacccaggaggacgtagatgaacacggtgaaatgcaggacgat
gacactcccaaggagctgacggaagaagagaagctgcaggtcctgcattctgacgagttc
ttgtcgttttttgagcgcggcagcagaatcgtggagagagctctgtctgagcaggtggac
gtctgcttcgactacagtgggagagacctggaggataaagagggtgacttgcaggcaggc
gcaaagctggttctgaacaggcagtttgcagatgagcgctggactaaaaacagagtggtc
acctgtctggactggtcgcctcagtatccagagctgctggtggcctcgtacaacaacaac
gaggacgcgccacatgagcctgatggcgtggcgctcgtctggaacatgaagtacaagaag
gctacaccggagtacatcttccactgccagtcagaggtgatgtcagctgggtttgcaaag
tttcaccccaacctggtggtgggtggaacgtactctggacaaattgtcttatgggacaac
agaagcaacaagcggactccagttcaaagaactctcctgtctgcagctgcacacacacat
cccgtccactgtgtgagtgtggttggaacccaaaacgccaacaacctgatcagcatttcc
actgatggcaagatgtgctcctggagcctcgatatgctctcccagccgcaggacagtctg
gagctggtgttcaaacagagcaaggccgtggctgtaacttccatggcgtttcctctgggt
gacgtcaacaactttgtggtggggagcgaggacggctctgtttatactgcatgtcgccat
ggcagtaaagcaggcatcactgaggtgtttgaaggccaccatggtcctgtgacagggctg
agctgccacagtgctgcaggacctgttgatttctctcacctcttcatctcatcttctttt
gattggactgttaaactttggagcaccaagagcacccgacctctgtactcatttgaggac
agctgtgactacgtctacgatgccatgtggtctccaacacatcctgctctgtttgcatgt
gtggacctgtctggacgcctggacctgtggaacctcaacaatgatactgaagttcctact
gccagtgtgtgtgtggacgggtctccagcactgaaccgcgtgagatggtcccactctgga
aaggagattgccactggagattcagagggtcaggttcaggtctacgatgttggggagcaa
atctgtgtgcccaaagcagacgagtggactcgtttcgtcaggacgctggctgagatcaac
gagaacagagacgaagctgaggaactggccaacgtctga
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