Nematolebias whitei (Rio pearlfish): 119414643
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Entry
119414643 CDS
T08042
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119414643 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwh04147
]
119414643 (copb2)
Membrane trafficking [BR:
nwh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119414643 (copb2)
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119414643 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
119414643
NCBI-ProteinID:
XP_037537672
LinkDB
All DBs
Position
9:complement(36443086..36450780)
Genome browser
AA seq
935 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMADKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLKEAFAAEHYLRESCLGSSRPATDYPLVTPNEDRNILEEA
QGYEPKGIFVPLVSKTEESEDSPSVPVSPLMPPQPEPAAPKTEEEEEEEEEEEEETFSDT
QKDKILDELEIDLDNMELGDIDTTDVNLDDEFLDD
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgaggctggacattaaacggaggctaacagccaggtcggaccgggtaaagagt
gtggaccttcacccaaccgagccatggatgttggccagtctctacaacggcagcgtctgc
gtgtggaaccacgaaacgcagactctggtcaagacttttgaggtgtgtgacctgcctgtc
agagcttccaaatttgtggcaaggaagaactgggtcatcacaggagcagatgacatgcag
atccgcgtgttcaactacaacaccttggagcgggtccacatgtttgaggcccactctgac
tacatccgttgcattgctgttcatccaacacagccatacatcctgaccagcagtgatgac
atgctgatcaagctgtgggactgggagaagaagtggtcttgtagtcaggtgtttgagggt
catactcattacgttatgcagattgtcatcaacccgaaggacaacaatcagtttgccagc
gcctctctggacagaacaattaaggtctggcagctggggtcttcatctcccaatttcact
ttggagggtcatgagaaaggagtaaactgtattgactattacagcggaggagacaagccg
tacctgatatcaggagctgatgaccgccaagtcaagatctgggactaccagaacaagacc
tgtgttcagactctggagggtcatgctcagaatgtctcttgtgtcagcttccacccagag
ctgcccataatcatcacaggatcagaggatggtactgtgcgaatttggcactcaagcacg
taccggctggaaagcacactgaactatgggatggaacgagtgtggtgcgtgtgtggcctg
aggggctccaacaacgtggcgctgggatacgatgaaggcagcatcattatcaaagttggt
cgggaggagccagccatgtctatggacaccaatggcaaaatcatctgggctaaacatagt
gaaatacagcaggccaacctgaaggccatgggtgacactgaaatcaaagatggagagaga
cttcctctggctgttaaagatatgggcagttgtgaaatttaccctcaaaccatccagcat
aaccctaatggaaggtttgtcgtggtgtgtggagacggcgagtatatcatctataccgcc
atggctttgaggaacaagagcttcggctcagctcaagagtttgtctgggcacacgactcc
tctgaatatgccatcagagaaagcaacagtgttgtcaaaattttcaagaacttcaaagaa
aagaagtcctttaagcccgactttggagcagaagggatctacgggggctttttgcttggg
gtgagatcagtgaacggtcttgcattttatgactgggagaacaccgaattaatccgtcgc
attgagattcaacccaagcatatcttttggtcagactctggcgagttggtctgcattgca
acagaggagtccttcttcattctacgttacatggcagataaagtggctgcctcccaagag
aacaatgaaggcgtgacagaggatgggattgaagatgcctttgaggtccagggagagatc
caggagatcgtgaagactggactttgggttggagactgcttcatctacaccagctctgta
aacagactcaattactatgtaggaggagagattgtgactattgcacatctggacagaacc
atgtacctgcttggttacatacccaaagatgaccgtctgtacctcggagacaaggagctc
aacatagttagttattccctgctggtctctgtcctggagtaccagactgctgtaatgaga
agggatttcggaatggcagacaaggtgcttccaactatccctaaagaacagaggaccagg
gtggcacatttcctagagaagcagggcttcaagcagcaggccctagcagtgtctacagat
cctgaacacaggtttgagttggccttgcagctgggagagctgaagattgcctaccagctg
gctgtggaagcagagtcggagcagaaatggaagcagctagcagagctggctatcagtaag
tgccagtttggcctggcccaggagtgcctgcaccacgctcaggattatggtggcctgctc
ctcctcgccacggcttctggaaacgccaccatggtgggcaagctggctgaaggtgcagag
agagacggcaaaaacaatgtggcctttatgacatacttccttcagggaaaactggatcag
tgtttggagcttctaatcaagactaacagactacctgaagctgctttcctggctcgcacg
tacctgcctagtcaggtgtctcgtgtggttaaattatggagggagagtttagccaaagtc
aaccagaaggctgcagaatctttagcagaccccaccgagtatgaaaatctgtttcctggc
ctgaaagaggcgttcgcagctgaacattacctgagagagagctgcttgggcagctccaga
cctgctacagattatccacttgttactcccaatgaagacagaaatattcttgaggaggct
caggggtatgagcctaaaggcattttcgttccgctcgtctccaagacagaagaaagtgaa
gactctccctcagtcccagtgtctcctctgatgcctccacaacctgaacctgctgctcct
aaaacagaggaggaggaggaggaggaggaggaggaggaggaagaaacattctcagacaca
cagaaagataagattctggatgagctggagattgacctggacaacatggagctcggtgac
atcgacaccacagacgttaacctcgacgatgaatttctagatgattaa
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