Nematolebias whitei (Rio pearlfish): 119414708
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Entry
119414708 CDS
T08042
Symbol
chmp5a
Name
(RefSeq) charged multivesicular body protein 5
KO
K12198
charged multivesicular body protein 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04144
Endocytosis
nwh04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119414708 (chmp5a)
09143 Cell growth and death
04217 Necroptosis
119414708 (chmp5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119414708 (chmp5a)
Membrane trafficking [BR:
nwh04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
119414708 (chmp5a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
NPV_P10
Hydantoinase_B
FliJ
Alpha-E
DUF848
TBCC_N
DUF948
COG6_N
Motif
Other DBs
NCBI-GeneID:
119414708
NCBI-ProteinID:
XP_037537745
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All DBs
Position
9:39780647..39787911
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AA seq
220 aa
AA seq
DB search
MNRIFGRGKPKAPPPNLSDCISTVDARAESIDKKIGRLDAELLKYKDQLKKMRDGPSKNM
VKQKAMRVLKQKRMYEGQREQLVQQSFNMEQANYTIQTLKDTKTTVDAMKTGAKEMKKAY
KDVKLDQIDDLQDQLEDMMEDAGEVQEALSRSYGVPDIDEEDLEAELDALGDELLLDDDS
SYLDEASSAPSIPEGNPSDSKTNKDGVLVDEFGLPQIPAT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaatattcggacgcgggaagcccaaagcgcctcctccgaacctgtcggactgt
atcagcactgtggatgccagggcagaatccatagacaagaaaataggcaggctggatgct
gagcttttaaagtacaaggatcagctgaagaagatgagagatgggccctccaagaatatg
gtgaagcaaaaggcgatgagagtcctgaagcagaagagaatgtatgaaggtcagagggaa
cagctggttcagcagtcgttcaacatggagcaggcaaactacacgatccagaccctaaag
gacaccaaaactacagtggatgccatgaagactggggcgaaggaaatgaaaaaggcctac
aaggatgtcaaacttgatcagattgacgatttacaggaccagctggaggacatgatggag
gacgccggcgaggtccaggaagccctgagccgcagctacggcgttccggacatcgacgag
gaggacttggaagcagagctggatgcgctgggtgatgagctgctgctggacgatgacagc
tcctacctggacgaggcttcatctgctccgtcgattcctgaggggaaccccagcgacagc
aaaacgaacaaggacggtgttttggtggatgagtttggtttgccgcagattcccgccaca
taa
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