Nematolebias whitei (Rio pearlfish): 119414833
Help
Entry
119414833 CDS
T08042
Symbol
puf60a
Name
(RefSeq) poly(U)-binding-splicing factor PUF60a
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119414833 (puf60a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119414833 (puf60a)
Spliceosome [BR:
nwh03041
]
Complex A
U2 snRNP components
U2 related factors
119414833 (puf60a)
Complex B
119414833 (puf60a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
119414833
NCBI-ProteinID:
XP_037537883
LinkDB
All DBs
Position
9:51817536..51859229
Genome browser
AA seq
526 aa
AA seq
DB search
MAAAVSAGGPAPIMENGQSSTTTTPTTTKLGLPPLTPNQQEALQKAKKYAMEQSIKSVLV
KQTLVQQPFSSLQMAPLTMSMGDALSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIR
QAFIPFGPIKSIDMSWDSITMKHKGFAFVEYEVPEAAQLALEQMNSVVLGGRNIKVGRPS
NIGQAQPIIDQLAEEARAFNRIYVASVHPDLSDEDIKSVFEAFGKIKSCMLSREPTTGRH
KGYGFIEYDKAQSSQDAVASMNLFDLGGQYLRVGKAVTPPMPLLTPATPGLPTAAAVAAA
AAASAKITAQESVGASILGALAAPSLLTQQLGLPQAVMATQAPGVITGVTPIRPGLPQVG
LVTPVLATPRSVTTLLGAEQKKKEEAAFQQEVQQDGTTEPLSEQEHMSISGSSARHMVMR
KLLRKQESTVMVLRNMVGPDDIDDDLEGEVTEECGKFGRVKRVIIYQERQGEEEDADIIV
KIFVEFSEVAEMDRAIQALNNRWFGGRKVVAEVYNQERFDTSDLSA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgtttctgcgggaggaccagctcccatcatggagaatggacagagcagc
accaccacaactccgaccaccaccaaactgggcctgccgccactcacccccaatcagcag
gaggcgctccaaaaggcaaagaagtacgccatggagcagagcatcaagagcgtgttggtc
aaacagactcttgtgcagcagccgtttagcagccttcagatggcgcctctgacgatgagt
atgggcgacgcactgtctcctctgcagtctgttgcagctcagagacagagagctctggcc
atcatgtgtcgagtgtatgtcggctccatctactacgagcttggggaggataccatcaga
caggctttcatcccttttggaccaatcaaaagcattgacatgtcctgggactccatcact
atgaagcataagggtttcgcctttgtggagtacgaggtacctgaagcagctcagctagct
ctagagcagatgaactctgttgtcctggggggaaggaacatcaaggttggcaggcctagt
aacattggccaggctcaaccaatcattgaccagcttgcagaagaagcacgtgccttcaac
aggatctatgtggcctctgtccacccggatctttccgatgaggacatcaagagtgtcttt
gaagccttcggaaaaatcaagtcatgcatgttgtcccgcgagccaaccaccggacgtcac
aaaggttatggcttcatcgagtatgataaggctcagtcatctcaggatgctgtggcctct
atgaacctgttcgatctggggggtcagtacctgcgggtcgggaaagccgtaactccgccc
atgcccctcctcacgccagcaactcctggacttcctactgccgctgctgtagctgctgct
gctgctgcgagtgcaaagatcactgcccaggagtcagttggagcatcaattctcggagcg
ctggctgctccatctctccttacccagcaacttggacttcctcaggccgtcatggccacc
caggccccaggtgtcatcacaggcgtgaccccaattcgacctggcctgcctcaggtgggg
ctggtgaccccggtgctagccacgccccggtcagtaacaaccttgcttggagcggaacag
aaaaagaaagaggaggcagcgtttcagcaggaggtgcagcaggatggaaccactgagcca
ctaagtgagcaggagcacatgagcatcagcggcagcagcgcccgacacatggtgatgagg
aagctgctccggaaacaggagtccaccgtcatggttctgaggaacatggttggacctgat
gacattgacgatgaccttgagggtgaggtgacggaggagtgtggaaagtttggccgagtg
aagcgtgtcatcatctaccaggagcgtcagggcgaggaagaggacgcagacatcattgtt
aagatctttgtggagttctccgaagtggccgagatggaccgggccattcaggcgctcaac
aatcgctggtttggaggacggaaggtagtggccgaggtttacaaccaagagcgctttgac
accagcgacctgtcggcgtag
DBGET
integrated database retrieval system
