Nematolebias whitei (Rio pearlfish): 119414967
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Entry
119414967 CDS
T08042
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119414967 (kcnn1a)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
119414967 (kcnn1a)
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Med4
DUF6775
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
119414967
NCBI-ProteinID:
XP_037538016
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Position
9:16929637..17033299
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AA seq
553 aa
AA seq
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MNTCKYNGGVVRPLVGSLASSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNAGEDPSKA
SNESLVREGGGRGGGRAPQKKNRDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTE
TELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYE
RIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYMPSVADADVDIILSIPMFLRLYLIGRV
MLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVC
ERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAV
VARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQ
RKFLQAIHQLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLED
KLDSVAGSLQALPCLISQAITQQQQDFMDGFVHRFRPASLASERSEHSERSWTSTTRRRR
SPSTAPHTSSDSG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcaagtacaatggcggagtggtgagaccactagtgggcagcctggcatcc
tcgtcgcgccgcaaccttgctgagctcgactcggagacccagcccttgcagacgctgcac
agctctggcctggaggtggtggtgtcaaagggaaacgctggcgaagaccccagtaaggca
tccaatgagagcttggtcagggagggtggtgggcgaggcgggggcagggcaccccagaag
aagaacagggacattggctacaagcttggtcaccggagggcgctgttcgagaagaggaag
cggctcagcgattacgcactcatctttggaatgtttgggattgtcgtcatggtgacagag
acagaattgtcatggggggtttacactaaggaatcttcatactcatttgcactgaaatgc
cttatcagcctttccactgttattttgctcggtcttataataatgtaccacgcccgggaa
atccagctgttcatggttgacaatggcgcagatgactggaggatagccatgacatatgag
agaatcttcttcatcgtgctggagcttttggtgtgtgccattcatcccatccccggccag
tacgtcttcacttggacagcacggctggctttcacctacatgccatctgtggctgatgcc
gatgtggacattatcctctctatccccatgtttctgagactctacctgatcggcagggtt
atgttactccacagcaagctgttcacggacgcttcgtcccgcagcattggtgccctcaac
aagatcaactttaacacccgctttgtcatgaagaccctcatgaccatctgtccaggaaca
gtgttgctggtgttcagtatatcctcctggatcattgcagcatggactgtgcgtgtctgt
gagaggtatcatgacaaacaggaagtaaccagtaacttcctgggagccatgtggctcatt
tcgattaccttcctttctattggctacggtgacatggtaccacacacgtactgtgggaaa
ggcgtgtgtcttcttacagggatcatgggtgctggttgcactgcattggtggttgcagtg
gttgccaggaagctggagctgaccaaggctgagaagcatgtccacaactttatgatggac
acacaactctgcaaacgagtaaagaacacagctgccaatgtactcagggaaacatggctc
atttataaacacaccaagttggtcaagaaaatagatcacgccaaggtgcggaaacaccag
cgcaagtttctccaagccattcaccaactacgcagtgtgaagatggagcaaagaaaactc
aatgatcaggccaacacattggtggacctagcaaagacccagaatgtgatgtatgacctg
gtgtcagaactgcaggaacgcagcgaggagctggacaagcgcatcggcacattagaggac
aagctggactcggtggcaggcagcttgcaggcactgccctgcctcatctcccaagccata
acccagcagcagcaggacttcatggatggctttgttcaccgctttcgtcctgcctctcta
gcatcagagcgttctgaacactccgagcgatcgtggacttccaccacacgtaggcgacgc
tctccatcaacagcaccacacacatcctctgacagtggatga
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