Nematolebias whitei (Rio pearlfish): 119415040
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Entry
119415040 CDS
T08042
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03272
Virion - Hepatitis viruses
nwh04382
Cornified envelope formation
nwh04514
Cell adhesion molecules
nwh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119415040 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119415040 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119415040 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119415040 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nwh03037
]
119415040 (cldn1)
04147 Exosome [BR:
nwh04147
]
119415040 (cldn1)
04515 Cell adhesion molecules [BR:
nwh04515
]
119415040 (cldn1)
Cilium and associated proteins [BR:
nwh03037
]
Other cilia and associated proteins
Stereociliary proteins
119415040 (cldn1)
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
119415040 (cldn1)
Exosomal proteins of colorectal cancer cells
119415040 (cldn1)
Cell adhesion molecules [BR:
nwh04515
]
Immunoglobulin superfamily
L1 family
119415040 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
OppC_N
Motif
Other DBs
NCBI-GeneID:
119415040
NCBI-ProteinID:
XP_037538099
LinkDB
All DBs
Position
9:complement(27557935..27559214)
Genome browser
AA seq
208 aa
AA seq
DB search
MANGGIQLLGFTLGFIGFIGIIASTVMVEWKASSYAGENIITAQAMYEGLWKSCVYQSTG
QIQCKVYDSLLQLPDIVQGARGLMVSSILLSLISIMVSMVGMKCTTCMSEQPEQKNKVAL
AGGVVFIIAGLLGLVGTSWYGHRIAQDFYNPFTPTNSRYEFGSALYVGWGASCLMLIGGG
FLCCNCSNKGGSKKAPRYPPPASAGSRV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggaggaatacagcttcttggtttcacactgggcttcattggcttcattggg
atcatagcatctacagtcatggtggagtggaaggcttcatcctatgctggggagaacatc
atcacagcccaggccatgtatgaggggctgtggaagtcctgtgtatatcagagcacggga
caaattcagtgtaaagtctatgattccctcctccaactaccagatattgtgcagggagcg
cgaggcctgatggtgtcctccattttgctgtcgcttatttccatcatggtgtccatggtg
gggatgaagtgcaccacctgtatgtcagaacagccggagcagaagaacaaagtggctctg
gctggaggggtcgtcttcattattgctggtctgcttggtttagtgggaacgtcctggtac
ggccacagaatagctcaggacttctacaacccatttactccaaccaattccaggtatgaa
ttcgggagcgccttgtacgttggatggggagcttcctgtctgatgcttataggagggggc
ttcctctgctgcaactgctctaacaaggggggctccaagaaagctccacgctacccacca
cccgcctctgcaggcagcagagtttaa
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