Nematolebias whitei (Rio pearlfish): 119415048
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Entry
119415048 CDS
T08042
Symbol
cacna1eb
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04010
MAPK signaling pathway
nwh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119415048 (cacna1eb)
04020 Calcium signaling pathway
119415048 (cacna1eb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119415048 (cacna1eb)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119415048 (cacna1eb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
DUF2755
Motif
Other DBs
NCBI-GeneID:
119415048
NCBI-ProteinID:
XP_037538108
LinkDB
All DBs
Position
9:28634664..28712954
Genome browser
AA seq
2387 aa
AA seq
DB search
MLTSSNQSLFLTPPHHSPPTCGRRGETHVQSSLSLPEPEEWKRSHPSPRPGLAQGVRSCS
LQVPHAVPESLGLPPRAASFDVPYSQDDGSSDQGSGSQSPHVMMRRRGGGLLEQKDIIMA
HQAHKIQSTPQARRKEWEMARFGDECAPTTVDPGDGDVERGGDGQDAASAGLTASMKQAK
AQRARTMALYNPVPHRQNCLTVNRSLFIFAEDNVIRKYARKIIEWPPFEYMILATITANC
VVLALEQHLPGEDKTPMAKRLEKTEPYFIGIFCFEAGIKLVALGFVFHKGAYLRNGWNVM
DFIVVLSGILATAGSHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMIPLLQ
IGLLLFFAILMFAIIGLEFYSGKLHHTCQPSDDILNNETVDSSELAFACGVRKCPEKYDC
NDTWIGPNDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGLTWNWMYFIPLIIIG
SFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQVERELNGYRAWIDRAEEVMLAEE
NKSSGRSPLDVLKRASKKTGARRGAPGSDKFTDTSTASMSRSRMNFRSGRRGPAAYLRRK
ERMLRISIRRMVKTDTFYLMVLSLVALNTICVAIVHHDQPDWLTVFLYYAEFVFLGLFLA
EMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGMSFGISVLRALRLLRIFK
ITKYWASLRNLVVSLMSSMKSIISLLFLLFLFTVVFALLGMQLFGGRFIFEDYTPTNFDT
FPAAIMTVFQILTGEDWNEVMYNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEEEEFFNQRYARGRDGLISDGRRRPYLYRKRAIHRGRPTFPDDPD
GPIVTTEEQPPSSSKPFANRRERRRKVNMSVWEQRANQLRKRRQMASREELFGNPTEDTA
ETPTIPHHPPALTPEASPAHLPESPMLVGMPLPEPPTAEPLVNLSEEKPAGANHRTAGGG
RHRLARKFRSSQGPDEGARHRRHRHREARIEAKSLDCTQSPHEVLHVRRSLSQERKIIDE
REEKEDKEESEKAEEQNVTQPEEEDGGTCIVNPYADIGEDYKRDSAPSGDNPDPPQCEQL
PHCTWSEKMEGSSSDHYEPLSQNIPVEPAVEATEFIVSTIESEKRKISVKRDNKSKVEGS
VAIEMSAQPLLELTPVTVNSKELEAYQSDQKEEEEETEEEEPPVPPKPEAPDSMFIFKAS
NPIRRICHYVVTLRYFEMTILLVIVASSIALAAEDPVCTNSDRNKVLRYFDYVFTGVFTF
EMIIKMIDQGLILHDGSYFRDMWNLLDFIVVVGALIAFALTNVLGNTKGRDIKTIKSLRV
LRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYQLFMFIFAVIAVQLFKGKFFFCT
DSSMKTEKECRGFYIDYSRDKKEVKRREWKRHEFHYDNVCWALLTLFTVSTGEGWPQVLQ
HSTDVTEENMGPSRGNRMEMSVFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMIQECSL
EKNERACIDFAISAKPMTRYMPQNRQTFQYRLWHFVASPSFEYTVLVMIALNTVVLMMKY
HSAPTAYDAVLKHLNTAFTVLFSMECILKIMAFGLVNYFRDTWNIFDFITVLGSITEIIV
DLQSVNTINMSFLKLFRTARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYA
IIGMQVFGNIKLNDESHINQHNNFKTFFSALMLLFRSATGESWQEIMLSCLSGQGCEPDP
SIAPLTISPDHEGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPH
HLDEFVRIWGEYDRLACGRIHYTAMYEMLTHMSPPLGLGKKCPAKIAYKRLVLMNMPVDE
DMTVHFTSTLMSLIRTALDIKIARGGEDRVALDSELQKEISIIWPYLPQKNLDLLVPINK
DTDMTVGKIYASMMIMDYFKQNKAKKLRQQLEAQKSKLMFKRLDASTLPEDILSNTQTLP
MMAHSAGSALTRGGFVALSPISPQELFLQPISSDVDASQQQNLVGECFWGIGTPLELPLG
RGPCVRASSMPRLAVELQQTEVRSGSMKRSVSTVADQRVNGLWQEEKSPERVYRPRHKSY
KAAVSRSEHRERGRSKELCHLLSPDTSRCNSEERSLQPSRSSSAEREHPQDKRGNSSDSP
VPSTSESSTPSGRRPLSQTPTRSHPHISYSPLVCRTQASAEEDEDEQGSPETVRRGKSKW
DTQEGAAGESRSEAGRHSSPPRRYPSEPFLASQEDDHSPDPTGPMETLTFEAAVACSLGR
ANTIGSAHPRWRTGWQVPNGHFRKRLVQTTSTSGCDPLSDTEEDDRC
NT seq
7164 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccagttcaaaccagtcccttttcctcacaccccctcaccactccccgcccacc
tgtggtcgtcgtggagagacacacgtccagtcctctctgtctttgcccgagcctgaggag
tggaagaggtcccatcccagcccccgtccgggcttggctcaaggagtccgctcctgctcc
ctgcaggtccctcatgccgtcccagagagcctgggcctccccccacgagcggccagcttt
gacgtcccctacagccaggacgacggctcatccgaccagggctcggggtctcagagcccc
cacgtcatgatgaggcggcgtggcggcgggctcttggagcagaaagacatcatcatggcc
caccaggctcataaaatacagagcacgccacaagcccgcaggaaggagtgggaaatggct
cggtttggagacgagtgcgctcccaccacggtggaccccggggacggggacgtggagcgc
ggtggagacggacaggacgcggcttccgccgggctcacggcttccatgaagcaagccaag
gcgcagcgggcccggaccatggctctgtacaacccggtcccccaccggcagaactgcctc
accgtcaacaggtcgctctttatctttgctgaggacaacgtcatcaggaaatacgccagg
aaaatcatcgagtggccaccgtttgagtacatgatcctggccaccatcaccgctaactgt
gttgtcctggccttggagcagcacctccccggagaagataagacccccatggcaaagaga
ctggagaagacagagccgtattttatcggtatattctgcttcgaggcggggatcaagctt
gtggctcttgggtttgttttccataaaggagcctatctgaggaacggctggaacgtcatg
gacttcatcgtcgtcctcagcgggatcctggccactgctggttcccacatgaacatccct
gtggaccttcggaccctgagggctgtacgagttctgagacctctcaaactcgtctccggc
atcccaagcctgcagattgtgctgaagtccatcatgaaggccatgattccactgctccag
atcggccttcttttgttctttgccatcctcatgtttgccatcatcggtttggagttctac
agcgggaagcttcaccacacctgccagccatcggacgacattctcaataatgagactgtt
gactcatcggagctggcatttgcatgcggagtgaggaagtgtccagaaaagtacgactgc
aacgacacgtggatcggccccaatgatggcatcacgcagtttgacaacatcctgtttgct
gttctcaccgtcttccaatgtatcaccatggagggatggacagccgtgctctataataca
aatgatgcactgggtcttacatggaactggatgtacttcatcccgctcatcattattggc
tcattctttgtcttgaatctagttttgggagttctgtctggagagtttgccaaagagagg
gaacgggtggagaacaggagagccttcatgaagttgcgccgccagcagcaggtggagaga
gaactgaacgggtacagagcctggatagacagggcagaggaagtgatgctggcagaggag
aataaaagttcaggaagatcaccgttagatgtgttgaagagagcgagcaagaagactggt
gcacggagaggagcaccagggagcgacaagtttacagacacgtccaccgcaagcatgtca
agatcaagaatgaacttccgcagtggtcgccgcggccccgctgcctacctgcgacgcaaa
gagcgcatgttgcgcatctctatccgccgcatggtgaagacggacacgttctacttgatg
gtgctcagtctggtggctctcaacaccatctgcgtggccatcgtgcaccacgaccagccc
gactggcttactgtcttcctctactatgcagagtttgttttcttggggctgtttctggcg
gagatgtttttgaaaatgtacggtctgggtttccgactctacttccattcatctttcaac
tgctttgactgtggggttatcgttggcagcatcttcgaggtcgtttggggtttcttcagg
cctggcatgtcgtttggtatcagtgtactgagagcgttaagacttctaaggattttcaaa
atcaccaagtactgggcctctctcaggaacttggttgtttccctcatgagctccatgaag
tccatcatcagcctgcttttcctcctcttcctcttcacggtagtgtttgctctactcggg
atgcagctgtttggaggaaggttcatctttgaagactacactcccaccaactttgacacg
tttccagctgccatcatgacagtgtttcagattttgactggtgaggactggaatgaggtg
atgtacaatgggattcgttctcagggtggcgttcagtacggcatgtggtcatccatctac
ttcatagtgctcacactgtttggtaactacactctgctcaatgtcttcttggccatcgct
gtggacaatctggccaatgcacaggaacttacaaaggatgaagaggaggaagaagagttt
ttcaatcagagatatgcgagaggaagagacggcctgatatcagatggaagaagaagacct
tacctgtacaggaaacgggccatccatagagggagacccaccttcccagatgatcctgat
ggtccaatagtgactacagaggagcagcccccgagtagctccaaaccttttgcaaaccgt
cgcgagcggaggaggaaagttaacatgtctgtatgggagcagagggccaaccagctacga
aaacgccgtcagatggcgagcagagaggagctgtttggcaacccaacagaggacacagct
gaaactccaaccatcccccaccacccccctgctcttactccagaggccagtccagctcac
ttgcctgagtcacccatgctggttgggatgcccctacccgaacccccgacggctgagcct
cttgtcaacttgagcgaggagaaaccagcaggagcgaaccaccgtaccgcagggggcggc
agacatagattggctcgaaagttcaggtccagtcaggggccagatgaaggggcccggcac
aggcgccaccgtcaccgtgaggcccgcattgaagcgaagagtctggactgcacacagtcg
ccacatgaggtgctgcatgtcaggcggtcactcagccaagagaggaagatcattgatgaa
agggaggagaaggaggacaaagaagaaagtgagaaagcagaagaacagaacgttacacaa
cccgaggaggaggatggtggaacgtgcatcgtcaacccatatgcagacattggagaagac
tataaaagagattctgctcccagcggggacaatcctgatcctccgcagtgcgagcagctg
ccacactgtacctggtcagagaagatggagggaagcagctcagatcattatgaacccttg
agccaaaacatcccagtggagcctgctgtcgaggcaacagagttcattgtgagtaccatc
gagtccgagaaacgcaagatctccgtcaaacgtgataacaagtccaaggtggaaggcagc
gtggccatcgaaatgtcagcacaaccactgctggagctcaccccggtgacagtgaacagt
aaagagttggaggcgtaccagtctgatcagaaagaggaagaagaggagacggaggaggag
gaacctccagtgcctcctaaacccgaagctcctgacagcatgttcatcttcaaagcctcc
aaccctatcaggaggatttgtcactatgtggtcactctccgttatttcgagatgaccatc
ctgcttgtgatcgtggcgagcagcattgcactggcagctgaggacccagtgtgcacaaac
tcagacagaaacaaggtgctgcgttattttgattatgtgttcactggagtgttcaccttt
gaaatgattataaagatgatagaccagggcctcattctgcacgatggctcttatttccga
gacatgtggaacctcttggacttcattgttgtggtgggagcactgatcgcctttgctctg
acgaatgtgctggggaacaccaaaggcagagacatcaagacgataaagtccctccgagtt
ctgagagttctgcggccgcttaaaaccatcaagagacttcctaaacttaaggcggttttt
gactgtgttgtcacgtcgctaaagaacgtcttcaacatcctcattgtgtatcagctcttc
atgttcatcttcgctgtcattgccgtccagctctttaaggggaagttcttcttctgcact
gacagctccatgaaaacagaaaaggagtgccgaggtttttacattgactacagcagagac
aagaaagaggtgaagagaagagagtggaagagacacgagtttcactacgacaacgtctgc
tgggccctgctcacccttttcactgtgtcgacaggagaagggtggcctcaggtccttcag
cactcgactgacgttacagaggaaaacatggggccaagtcgtgggaaccggatggaaatg
tctgttttctatgtggtctacttcgtggtcttcccgttcttcttcgtcaacatctttgtc
gctctcatcatcatcacctttcaggaacaaggtgacaagatgattcaggagtgcagtctg
gagaagaacgagagggcctgcattgattttgccatcagcgccaagccgatgacccgctac
atgccccagaacagacagaccttccagtacagactgtggcactttgtggcctcaccttct
tttgagtacacggtgctcgtcatgatcgctcttaacactgtcgtcctgatgatgaagtac
cactcggctccaacagcatatgatgccgtcctaaaacacctaaacacagccttcactgtc
ctcttctccatggagtgcatactcaagatcatggcttttggtcttgtgaactattttcga
gacacgtggaatatttttgattttatcaccgttctcggcagcatcacggaaataattgtg
gatttgcagtcggtgaacaccatcaacatgagtttcctcaagcttttccggacagccagg
ttgatcaagctgctgagacaaggctacaccatccgcatcttgctgtggaccttcgtacag
tctttcaaggctctaccttatgtctgcctgctcatcgccatgcttttcttcatctacgcc
attattggaatgcaggtgtttggaaacatcaagctgaacgatgagagtcacatcaaccag
cacaacaactttaagacctttttcagcgcactgatgctcctgttcaggagtgctacaggt
gagtcctggcaggagataatgctgtcctgtttgtcgggacaagggtgtgaaccggacccc
tccatcgcccccctcaccatatctccagaccatgagggtggctgcggcacagactttgct
tactgctactttgtctcctttatcttcttcagctcattcctgatgctgaatctgtttgtg
gctgtgattatggataactttgagtacctgactcgagactcctccatcctgggccctcac
cacctagatgaatttgtcagaatatggggggagtacgatcgacttgcatgtgggcgtatt
cactacacagccatgtacgagatgttgacacacatgtcaccgccactgggcctggggaaa
aaatgtcctgctaagatcgcctacaagaggctggtgttgatgaacatgcccgtagatgag
gacatgaccgtccacttcacctccactctgatgtcactcattcgcacagctttggacatc
aaaatagctcgaggtggtgaggaccgtgttgctctggactcggagctgcagaaggagatc
agtattatttggccttatttgccccagaagaacttggacctactggtacctatcaacaaa
gatactgacatgacggtggggaagatctacgcttcgatgatgataatggactacttcaaa
cagaacaaagccaagaaactccggcagcagctggaggctcagaagagcaagttaatgttt
aaacgtctggacgcctccactctccctgaggatattctgtccaacacccagacactaccg
atgatggcccacagtgctggttcagccctgaccagaggaggcttcgtagctctgagcccc
atctcaccacaggaattgtttctgcagcccataagctcagacgtggacgcaagtcagcag
cagaatctggtgggcgagtgcttttgggggattggtaccccactggagcttccacttggg
aggggcccgtgtgtgcgggcctcttccatgccccgtctggctgtagagctgcagcagaca
gaggttagaagtggatccatgaaacggtcggtctccacagtcgcagatcaacgtgtaaac
ggactctggcaggaagagaaaagtcctgagcgagtgtatcgacctcgtcacaaaagctac
aaggctgctgtgtctcgttctgagcacagagagcgtggccggtctaaagagctttgccac
ctcctgtctcctgacacgtctcgatgcaactcagaggaaagaagcttgcagccttcgcga
tcctccagcgctgagagagaacatccgcaggataaacggggcaacagttcagacagccca
gttccctccacctcagagtccagcacacccagcggccggcgacctctatcacagaccccg
acccgatcccaccctcacatctcctactccccgcttgtgtgtcgcacccaagcctcggct
gaggaagacgaggatgagcagggcagcccggagactgtgaggcggggcaagtccaaatgg
gacacccaagaaggagctgcaggggagagtaggagcgaggccggcaggcactcgtcccca
ccccgacgctacccctctgagcctttcttggcctcgcaggaggacgaccacagcccggac
cctaccggtcccatggagacgttgaccttcgaggcggctgtggcctgcagtttagggcgc
gcaaacaccattggctcagcccacccacgctggcggacggggtggcaggtccccaatgga
cactttcggaagcgtctggtgcagacgacctcaacgtcaggctgcgaccctctgagcgac
acagaggaagatgaccggtgctag
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