Nematolebias whitei (Rio pearlfish): 119415061
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Entry
119415061 CDS
T08042
Symbol
si:ch73-74h11.1
Name
(RefSeq) desmoglein-2
KO
K07597
desmoglein 2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119415061 (si:ch73-74h11.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119415061 (si:ch73-74h11.1)
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Major cadherins
119415061 (si:ch73-74h11.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
YniB
DUF4625
Motif
Other DBs
NCBI-GeneID:
119415061
NCBI-ProteinID:
XP_037538123
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Position
9:complement(29922153..29930683)
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AA seq
1104 aa
AA seq
DB search
MAGLLKCGTLLLLTSFLALVSVRGEWILAPRKLVENEDYTSFDFIAKIRSDKENFTAIRY
QITGPGVDQDPKGRFAVDPNTGYVKVYTIFDREEIPVYYLNGVAKFLNGSRAEKDIALTI
EIVDMNDNAPVIQTQQVGEVDECSSAGTLVMKVIGTDADDKRLPHAQIAYQIDAKSNGAN
MFYIDSRTGDIKVKQSNLDRETKDVYKLNIIASDMNGKAGGNSGSGEIEIRIRDINDNVP
VLEKESYEASVEENTIGMEVLRIKATDMDLSYTDSWLAVFEIVSGNEGGYFNITTDSKTN
EGIITINKALDYEEIQSLNLDLKVANKAEYNFGSGSMTGAVAGAGKSYPIKINVINQKEG
PRFQPNVKVVTVSEDTSSVSINKVITTYAAIDSDTLKTATNVRYAKLHDEDNWLSVDETT
AEIKLNKLPDRESKYLKNGTYYAEIICISNDLPSKTATGTIAIQVEDFNDHCPELTTKTQ
NMCFDDTFIYVTAVDKDEFPNSAPFHFTVIGDNKQKWTVEPLNETTVILRDQAHLWPGKY
SVQVEVTDQQGKSCADAQIIDLLVCTCQKNTKTCGPRSSRSSVFGVGGILLLLLGLLLLL
LIPLLLLFCLCGNAAREFKAIPFDAKEQLISYHTEGQGEDKEVPLLQVPVNMDGGTLNAK
DINIVRGREYMSGLVETDRALGGGLTMTGEDMYTYDRYGYSSGQEYNGFMGGEKMGGQDM
RFSHREFGAFDGMALSDNFLWQYYSQKANEASQQYQENELSQVYGYEGQGSLAGSVGCCS
LLENDNDLAFLDDLGPKFLTLAEICHGGSLVSKSANVEVSRPIIKPVPQVRPSTMTHVHT
RTETARDRDTANINTLNTSKVTSESSTIIQEERVTERSQGSATVPNVQVREKVVIPNQTL
LIQQPTMYYAATPMYVVESKPQMVLVSGGTQQAVGQVSQAGFGQGIMQVGGLQGSQVGHV
SQAGFGQGLMQVGGLQGSQGVVLVDGQVGMSGATRQAAQGPSQGKVSESTQVFVVKNGSA
GGKHSTHLVQDIGQIGRGSSDSNLEARGKGVQVKTFSMSSHGSAGSREDFAQIAAPKIQG
NQKVVMQHKKVSMIKKNTESSTSL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctgctgaaatgcgggacgctccttctcctcacctccttcctcgcgcttgtg
tctgtgaggggagagtggatcctggctcccagaaagcttgtggagaatgaagattacact
tcattcgactttatcgctaagattcgctcggataaggagaacttcacagcgataagatat
caaataactggtcctggtgttgatcaggatcctaaaggtagatttgctgttgacccgaac
actggctacgtgaaagtctataccatttttgatcgagaagaaatccctgtgtactactta
aatggtgtggcaaaattcctcaatgggtctcgtgctgaaaaggatattgcccttacaata
gagattgtagatatgaatgacaacgcaccagtcattcaaacacagcaagttggagaagtc
gatgagtgtagcagtgcagggacccttgtcatgaaagtaataggcactgatgcagatgat
aagagactacctcatgcccaaatcgcataccaaattgatgcgaagagtaatggagcgaat
atgttttatattgactctagaactggagatatcaaggttaaacagagtaatctggacaga
gagacaaaagacgtgtataagctgaatattattgcctctgacatgaatggaaaagcagga
ggaaactcgggaagcggtgaaattgagattcgtattagggacataaatgacaacgttcct
gtgctggaaaaagaatcgtatgaggccagtgtggaggagaacacaatcggaatggaagtt
ttgaggataaaagccacagacatggatttaagctacacggacagctggcttgcggttttt
gagatcgtttctgggaatgagggaggttatttcaatatcacaactgattctaaaaccaat
gagggaatcatcacaataaacaaggccctagactatgaggaaatacagtcactcaatttg
gacttgaaggttgccaacaaggcagagtacaactttggctctgggtcaatgacgggggct
gtcgctggtgcaggcaaatcatatcccatcaaaataaatgtcatcaatcagaaggagggt
ccccgtttccagccaaacgtaaaagtggtgactgtctccgaggacacctcatcagtctcc
atcaacaaagtcatcactacgtacgccgctatagacagcgacacactaaaaactgccacc
aatgtgagatatgcaaagttgcatgatgaggacaactggttgtctgttgatgaaacgaca
gcagaaatcaagctgaataaattgcctgatcgagaatccaagtatttgaaaaatggaaca
tattatgctgaaataatatgcatttccaatgaccttccctcaaaaactgcaacagggacc
atagccattcaggtggaggacttcaacgatcactgcccagaactcaccaccaaaactcag
aacatgtgctttgatgatactttcatttatgtcactgctgtagataaagatgagttcccc
aattcggcaccatttcacttcactgtgattggggataacaaacagaaatggacagtggag
cctctaaatgaaaccacagtcattctgcgagaccaagcccacttgtggccaggcaaatac
agtgtgcaggtggaggtcacagaccagcagggaaagtcgtgtgctgatgcccagataata
gatttattggtgtgcacatgccaaaaaaacactaaaacttgtgggccacgtagttcacgt
tcttcagtttttggagtcggaggaatcttgctcctgctgctgggactgctgcttcttctg
ttgattccccttcttctgctgttctgcctgtgtggaaatgcagcaagagagttcaaggcc
ataccttttgatgcaaaagaacaactcatctcctatcacacagagggacaaggagaagac
aaggaagttcctcttttacaagttccagtgaatatggatggtggtaccttgaatgcaaag
gacatcaacattgttaggggaagggaatacatgtcaggtctggttgaaaccgatagagct
ctaggtggaggattaaccatgacaggagaggacatgtacacatacgaccgttacggatat
tccagtgggcaagagtacaatggatttatgggtggagagaagatgggaggacaagatatg
cgtttctcccatcgtgaattcggagccttcgatggaatggccctatcagataattttctg
tggcagtactattcacagaaagcaaatgaagcttcacagcaatatcaagaaaatgaacta
tcccaggtctacggctacgagggtcaagggtcacttgcgggttctgtaggttgctgcagc
cttcttgaaaatgacaatgaccttgctttccttgatgaccttggaccaaaattcctaaca
ctggctgagatctgtcatggtggatctcttgtgagcaagtcagcaaatgtagaagtttct
cgtcccattatcaaaccagtgccccaggtcaggccatccaccatgacccatgttcatact
cgtacagaaactgccagagacagggacactgcaaacatcaacaccctcaacacctccaaa
gtaacgtctgagtcttccacgatcattcaagaggagcgagttactgagagatcccaaggt
tctgcaactgttcccaatgtccaagttcgggaaaaggtagtaattcctaaccaaacactg
ctcatacagcagcctaccatgtactatgctgctacgcccatgtatgtagttgaatccaag
cctcaaatggtgcttgtttcaggaggaacccagcaggcagttggccaggtgagccaagct
gggtttggccaaggtataatgcaggttggtggcctccaaggttctcaagttggtcatgtg
agccaagctgggtttggtcagggtctaatgcaggttggtggcctccaaggctctcagggt
gtggtccttgtcgatgggcaggtaggaatgagtggtgcaacaagacaggcagcacagggc
ccctctcaaggaaaagtctctgaatctactcaagtgtttgtagtcaaaaacggttcagct
ggcggaaagcacagcacacacttagtgcaggacattggtcaaataggacggggatcttca
gattccaacttagaagcaagaggtaaaggcgtgcaggtgaaaactttttcaatgagttca
catggttctgcaggatcaagggaggactttgcacagatagccgcacccaagattcaagga
aaccagaaagtggttatgcagcataaaaaagtctcaatgatcaagaaaaatacagagtct
agtacaagtctgtaa
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