Nematolebias whitei (Rio pearlfish): 119415065
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Entry
119415065 CDS
T08042
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119415065 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119415065 (ss18)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119415065 (ss18)
GBAF(ncBAF) complex
119415065 (ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
119415065
NCBI-ProteinID:
XP_037538128
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All DBs
Position
9:30466956..30476062
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AA seq
393 aa
AA seq
DB search
MSVAFAPHRQRKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVYL
ATIADSNQNMQSLLPAPPTQNMPMGPGVMNQSGPSPQPPHGHNMPSESMVSGGPPAPHMQ
NQMNGQMPGPNHMPIQGPGPGPNQPPNMSSGSMNMPPSSHGSMGGYNHAVPSSQGIPAQS
QMNMTQGQPMANYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGGGQHYQGQQNPMGMMG
QVNQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASEGNAQYGQQQEPY
QQGPPQQQGYPPQQQYPGQQGYPPQQQGYGPTQTAPGQYPNYPQGQGQQYGAYRPPQPGP
PQGQQQRPYGYDQNKLHILDTSQIDGQYGNYQQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgctcctcacaggcaacggaagggcgatataacccccgcaggaata
caaaagttacttgatgaaaacaaccagctgatccagtgtataatggacttccagagtaaa
ggcaaaacagcagagtgttcacagtatcaacagatgctgcacagaaatttagtgtatttg
gccacaatagcagactccaatcagaacatgcagtctctcctccctgctccacctactcaa
aacatgcccatgggtcctggtgtcatgaaccaaagtggaccttctcctcagccccctcac
ggtcacaacatgccctctgaaagtatggtcagcggcggccctccagcccctcatatgcag
aatcaaatgaatggacagatgcctggtcctaatcacatgcccattcaaggtcctggtcca
ggccccaaccagcccccaaacatgtccagtggctcgatgaatatgccccccagcagccac
ggctccatgggtggttacaatcacgcagttccttcctcgcagggcataccagctcagagt
caaatgaacatgacccagggccaacccatggcaaactatgggcctcgaccaaacatgaac
atgcagccaaatcaaggcccaatgatgcatcagcagcctccatcgcagcagtataatatg
ccccctggtggtggtggacaacactatcaaggacaacagaacccaatgggtatgatggga
caggtcaaccaaggaaaccatgtcatgggacagaggccaatgccaccctacagaccccca
cagcaaggacccccccagcagtacccagggcaggaagactactatggcgaccagtacagt
cacgcaggacagggagcctcagaaggtaacgcgcagtatggccaacaacaggaaccatac
cagcaaggcccaccacagcagcaaggctatccaccacaacaacagtacccaggacaacaa
ggttacccaccacagcagcaaggttatggtcccacccagactgctccaggacagtatcct
aactatcctcaggggcaggggcagcagtatggggcctatcgtcctccgcagcctggaccc
ccacagggccagcagcagcgcccttacggttatgaccagaataagttgcatatcctggat
acttcacaaattgatggccagtatggaaattaccagcaatga
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