Nematolebias whitei (Rio pearlfish): 119415218
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Entry
119415218 CDS
T08042
Symbol
abca4b
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119415218 (abca4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119415218 (abca4b)
Transporters [BR:
nwh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119415218 (abca4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
Motif
Other DBs
NCBI-GeneID:
119415218
NCBI-ProteinID:
XP_037538304
LinkDB
All DBs
Position
9:complement(42493482..42550007)
Genome browser
AA seq
2317 aa
AA seq
DB search
MKRGSQIRLLLWKNWTLRKRQKIRFLVEIFWPVLLFVGLVWLRKANPLYQQHECHFPNKA
MPSAGILPWIQGIFCNANNPCFRYPTPGESPGVVSNYNNSVLARFYADVQELLFDETEVQ
QLDRLWRDITSFSNFMDTLRINPSAVAGRGLKVEDIMKDDEVLTAFLLRDAGLSESVVHQ
LVNAKIRLEQFAFGVPDLQLKNIACSQSLLERFIIFPSRMGLHGVRNAMCALSQQMLQKI
EDILYGNLDFFKIFKLMPQVLDSRSPGIDLHFWGRALRATSEKIQLLMKQESSQELLKEV
SSLFRAGGPSSFTQLMSSVSHLFCGYPEGGGSRVLSFNWYEDNNYKVFLGVNGSKSHDYV
YDDTATPFCNSLMQTLESNPVTKIVWNSVKPLLMGKILYTPDSPAVRKILKNANTTFEEL
ERLQNMAKAWEEVGPQLWAFFHSSVQMNMIRDTLRNPTVLHFMDNSLDETSFSTKDILNF
LHNGPEDRREAGTANFDWRNIFNITDQIVRIFNQYGECISLDKFVAYTDEAQMIHQALHL
LEENKFWAGVVFEDMYPWTASVPPHVKYKIRMDIDAVERTNKIKDRYWDPGPRADPVEDQ
RYIWGGFAYLQDMIDHGIIKLHTSNDRPLGVYVQQMPYPCYVDDLFMITLNRCFPMFMVL
AWIYSVSMTVKSIVLEKELRLKETLKAMGVDSGVIWCTWFIDSFIVMTASTALLTAIIMG
GKVLNYSDPLLVFFFLLTFTVATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHILCFT
WQDRITNNIKLAASVLSPVAFGFGTEYLSRYEEQGLGLQWNNIQTSPLEKDTYSFLTSIL
MMVFDAVFYALLAWYLDNVFPGQYGIGRPVYFPLQPSYWHRPTPSVTERSDQDSKKPEPE
NQELDVESSATPETNACNGSASKKTCKHRSKREQLERERELLKLQEESPNQEEQAQDPAG
REGLLFFEPDPVDLVLGVQIQDLVKVFDRSSRPAVNCLNINFYEGQITSFLGHNGAGKTT
TLSILTGHYPPTFGTAYINGRDIKTDIDIIRTSMGMCPQHNILFNHLTVEEHILFYSLLK
GRTREEAEAEVESMLLDLGLPHKRDDEAQNLSGGMQRKLSVAMAFVGGSKVVILDEPTSG
VDPYSRRSIWDLLLKYRTGRTVILSTHHMDEADLLSDRIAIISKGQLYCCGSPLFLKNCF
GVGFYLTLVRRIKVLRKRENECDCASDCSCACSICTRYKDQSQNQLQQLDRVLDGDVDSI
TTLIHHHVPEAKLIETIGQELTYLLPSKGFKHRAYASLFRELEEMLADMGLSSFGISDTS
LEEIFLKVTAEGEAANNATTAEQWMLQGRKNGSRVGVGGDEEQNGVNHTPDSSAGKASRQ
VKGAALTLKQFHALLVKRFHHATRSQKDFLAQIVLPATFVFISLIFTLIVPPFGEYPSLT
LSPWMYGQQFTFFSNEHPFDPRMKHFIDRLLNRPGLGTQCMQGEPQGMPCNNSISEWEQP
DVSSVVLNILQSPEWNEQNPSPSCQCSTSQKLTMMPICPVGAGGLPPLQRVEATGDIMLD
LTGRNISDYLVKTYPSLIRTSLKSKYWVNEQRYGGLSVGGQLPVLNLNPKDVQNIFHQLG
RMLNTTGGHFSRLSLREFGTFLRYMESEFNVKVWYNNKGWHSMVAFMNVANNAILRAHLP
PSARPVEFGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFIPASFVLYLIQE
RVTKAKHLQFVSGVSPLVYWVTNFFWDMINYSLSTAMVVGIFMAFDKKCYTSPTNLPALI
ALLLLYGWSVTPMMYPMSYVFNVPSTAYVSLSCINLFIGINSSAITFVLELFENNRSLLT
FNEWLKKCLLVFPHFCLGRGLIDMAMNQAVTDVYARFGEEYTTDPFRWDFVGKNIAFMAV
EGFVYFILSLLIQYRFFLNHWLSDYKQVSVEDEDDDVAAERQRIYDGGSKTDILQMRDLS
KTYVGRERAAVDRICVGVPAGECFGLLGVNGAGKTTTFKMLTGDADVSYGEATVAGYSIL
TEILDVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPESEIPRVAEWGIQKLGLTDYA
GCCAGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWNAIMSVIQDGRAVV
LTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGDGYVVTMKIKAAKAGLSPELEP
VESFMESSFPGCVQREKHYNTLQYEIASSSLARIFQVVVANKERLSIEDYSVSQTTLDQV
FVNFAKQQTGEDENVTLHRRKGHSRKDVKISPARRNK
NT seq
6954 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggctctcaaatccgcctgttactgtggaaaaattggacactccgcaaaaga
caaaagatccgcttcctggtggagatcttctggccagtattgttgttcgtcggtctggtg
tggctgaggaaggccaatccgctgtaccaacaacatgagtgtcacttccccaacaaggcc
atgccttcggcggggattctcccctggatccaggggatcttttgcaacgccaacaacccc
tgtttcagatatccaaccccgggagagtcacccggcgtcgtgtccaactacaacaactca
gtactagcgcggttctacgctgacgtccaagagctcttgttcgatgagacagaggttcag
cagcttgacaggctttggcgtgacatcacatccttctctaactttatggatactttacgc
atcaacccctctgcagttgcaggccgcgggctgaaggttgaggacatcatgaaggatgac
gaagttttgacggccttcctgttaagagacgccggcctctcagagtctgtagtccaccaa
ctcgtaaatgcaaaaatacgtctggaacagtttgcgtttggagtcccagacctgcagctg
aagaacatagcgtgcagccagtctctgctggagcgtttcatcatcttccccagtcggatg
ggcctccacggggttcgcaacgccatgtgtgccctcagccagcaaatgctgcaaaagatc
gaggacatcctttatggcaatctggactttttcaagatctttaaactgatgcctcaggtt
ctggacagcagatctccggggattgacctgcatttctggggtcgggctctcagggcaacg
tcggagaagatccaattgctgatgaaacaggagagctctcaggagctcctcaaggaggtg
tcctctctgttccgagctggaggtccttcctccttcacccagctgatgtccagtgtgtcg
cacctcttctgtgggtacccagagggagggggctccagggtcctgtccttcaactggtat
gaagacaacaactataaggtgtttctgggggtcaacggcagcaagagtcacgactacgtc
tacgatgacactgccactcccttttgcaactccctgatgcagaccctggagtccaacccc
gtcacaaagatcgtgtggaattcagtcaaacccctgctgatgggaaagatcctgtacacg
cccgactccccggccgtccgcaagatattaaagaatgccaacaccacgtttgaggagctc
gagaggctgcagaacatggccaaggcctgggaggaggtgggaccccagctctgggctttc
ttccacagcagcgttcagatgaacatgatcagggatacgctgcggaacccaacagtgctg
catttcatggacaacagtctggatgaaacgagcttcagcaccaaagacatcctgaacttt
ctgcacaacggaccagaagacaggagggaggcgggaacagcaaactttgactggaggaat
atttttaacatcactgaccagattgtacgcatattcaaccaatatggagagtgcatcagt
ctggataagtttgtggcttacacggacgaggcccagatgatccatcaggccttgcacttg
ctggaggagaacaagttttgggccggcgtggtcttcgaggacatgtatccctggaccgcg
agtgtccccccgcatgtcaagtacaagatcaggatggacatcgatgcagtggagcggact
aacaagatcaaagacaggtactgggatcctggtcccagagcggatcccgtggaggaccag
aggtacatctggggcggttttgcgtacctgcaggacatgatcgatcacgggatcattaag
cttcacacgagcaacgatcggcctctcggggtctacgtccagcagatgccatatccttgt
tatgtggatgacctctttatgatcacgctgaaccgctgcttccccatgttcatggtgctg
gcctggatctactccgtgtccatgacggtgaagagcatcgtgctggaaaaggagctgcgc
ctcaaagagaccctcaaagccatgggggtcgacagcggggtcatttggtgcacctggttc
atcgacagcttcatcgtgatgactgcgagcacggctctgctgaccgctatcataatgggg
gggaaggtgctgaactacagcgacccactccttgtcttcttcttcctgctgaccttcacc
gtggccaccatcatgcagtgtttcctgatgagtgtgttcttcaacaaggccaacctggca
gcggcctgcagtggtatcatctacttcaccctctatctgccacacatcctttgtttcacc
tggcaggaccggatcaccaacaacatcaaactggcagcaagcgtactgtctccagtggcc
tttggctttggcaccgagtacttgtcccggtatgaggaacagggtttgggtctgcagtgg
aacaacatccaaaccagcccattagagaaagacacttactccttcctcacctccatcctc
atgatggtgttcgatgccgtcttctacgcgctcctggcctggtacctggacaacgtgttc
ccagggcagtatggcattggtcgaccagtctacttcccactccagccttcatactggcac
agaccaactccttcagttacagaaaggtctgatcaagattctaagaaacctgaaccagag
aaccaagagctggacgttgagagcagcgctacgccagagacgaacgcctgcaacggctct
gccagcaagaaaacctgcaaacaccgaagtaagagggagcagctggagcgagaacgagag
ctgctgaagctgcaggaggagagtccgaaccaggaggagcaggctcaggatcctgctgga
agagagggcctgttgttctttgagcccgaccccgtggacctggttttgggggtccagatt
caggatctggtgaaggtgtttgacagaagctctcgtccggctgtgaactgcctcaacatc
aacttctatgaggggcagatcacgtcctttttagggcacaacggggcaggaaagacaaca
acgctgtctatcctgacaggtcactacccccccacatttggcacagcctacatcaacgga
agagacattaaaactgacattgacatcatccgcacgtctatggggatgtgtccgcagcac
aacattctcttcaaccacctcacggtggaggagcacatcttgttctactctctgctgaag
ggtcggactcgagaggaggcggaggcggaggtcgagagcatgctgctggacctgggactg
cctcacaagagagacgacgaggcccagaacctctcaggaggtatgcagaggaagctctcc
gtcgccatggcgtttgtgggagggtcaaaggtcgtcattctggatgaaccgacctcagga
gtggatccgtattccagaagatccatttgggacctcctgctgaaatacagaactgggcgc
acggtgattctgtccacacaccacatggacgaggccgacctgctgagcgaccgcatcgcc
atcatctccaaaggacagctgtactgctgcggctcgccgctgttcctcaaaaactgtttc
ggcgtcggtttctatttaacgctcgtgcgccgtataaaggtcctcaggaagagagagaat
gaatgtgactgcgcctcagactgctcctgtgcctgctccatctgcaccagatacaaagat
cagtctcagaaccagctccagcagctggaccgagttctggacggggacgtagacagcatc
accaccctcatccaccatcacgtccccgaggcgaagctgatcgagaccatcgggcaggag
ctgacctatctgctccccagtaaaggcttcaaacatcgagcctacgccagtctgttccgg
gagctggaggagatgctggctgacatgggcctgagcagcttcggcatctccgatacgtca
ctggaagagatattcctaaaggtcacagcagaaggagaagctgcaaataatgccaccact
gccgagcagtggatgttacagggaagaaagaatggcagcagagttggtgtaggaggagac
gaagaacaaaacggtgtaaaccacacacctgacagcagtgcagggaaagcctccagacag
gtgaaaggtgccgctctgaccctgaagcagttccacgctctgctggtgaagagattccac
cacgccacgaggagccagaaagatttcctggcacagatcgtccttcctgccacctttgtc
ttcatatctctgatcttcaccctgattgttcctccgttcggagaatatcccagtctgact
ctgagcccctggatgtacggacaacagttcaccttcttcagcaatgagcatccgtttgac
cccaggatgaaacacttcatagatcgcttgttaaatcggccgggcctgggcacacaatgc
atgcaaggagaaccacaggggatgccgtgtaacaacagcatctcagagtgggaacagccc
gacgtctcctctgtggtcctgaacatcttacagagtcctgagtggaacgagcagaacccg
tcaccttcctgccagtgcagcacaagtcagaagctcaccatgatgcccatctgtcctgtc
ggtgcagggggcctgccccctctgcagcgagtggaggccaccggagacatcatgctggat
ctgacgggccggaacatctcagactatctggtcaaaacctatcccagcctcatcagaacc
agtttgaaaagtaaatactgggtgaacgaacaaaggtacggaggtctctcagtgggtgga
caacttcctgttctgaatctgaaccccaaagacgtccagaatattttccatcagctggga
cgaatgctcaacacaacagggggtcactttagcagactttcattgagggagtttgggaca
ttcttgcgatacatggagagtgagtttaacgtaaaggtatggtataataacaaaggttgg
cactccatggtagccttcatgaatgtggcaaataatgcaatcctgcgggcccaccttcct
ccgtctgccagacctgttgagtttgggatcactgccatcaaccacccactgaacctgaca
aaggagcagctttcagaagtcacagtgttgaccacgtccgttgatgcagtggtggcaatc
tgtgttatttttgccatgtccttcatccctgctagcttcgtcctctatctcattcaggag
cgagtgaccaaagccaagcacctgcaatttgtcagtggggtcagtccactggtttactgg
gtgaccaacttcttctgggacatgataaactattctctcagcaccgccatggtggttggt
attttcatggcttttgataaaaaatgttacacgtcaccaactaaccttccagcactaata
gctctgctgcttctgtatgggtggtccgtgacgcccatgatgtaccccatgtcctacgtc
ttcaatgtcccgagcacagcgtatgtatccctgtcctgcatcaacctcttcatcggcatc
aacagcagcgccatcacatttgtcctggaactttttgaaaacaatcggtctttgctgacc
ttcaacgagtggctgaagaaatgcttgctggtgttccctcacttctgcctgggccgtgga
ctcatcgacatggccatgaatcaagccgtcactgacgtttacgccaggttcggtgaagag
tacacaacggatcctttccgttgggactttgtggggaaaaacattgctttcatggcggtg
gaaggctttgtgtacttcattctcagtctcctgatccagtatcggttcttcttgaaccat
tggttatcagactacaagcaggtttcagtagaagatgaggatgatgatgtggcagcagag
aggcagaggatttatgatggagggagcaagacggacattctgcagatgagggatctctcc
aagacgtatgtgggcagagagagggcagctgtggaccggatttgtgtgggagtccctgca
ggagagtgctttggtcttctgggagtgaatggagctggaaagacgacaacatttaaaatg
ctcacgggtgacgctgatgtcagctatggagaggctactgtggcgggttacagcatcctc
acagagatccttgatgtgcaccagaacatgggttactgcccccagtttgatgccattgat
gagctccttaccggcagggagcatctctacctttacgctcgtctcagaggggtaccggag
tcagagatccccagagtggcagagtggggcatccagaagctcggtctgacagattatgca
ggctgctgtgcaggaacatacagtggagggaacaaacgcaaactctctaccgccattgcg
atgattggctgcccagccctggtgctcctggatgagcccacgacagggatggacccgcac
tctcggcgcttcctgtggaacgccatcatgagcgtcattcaggacggcagggccgtggtg
ctgacttcacacagcatggaggagtgtgaggctctgtgcactcgactggccatcatggtc
aatgggaccttcaagtgtctcgggaccatccagcatctcaaatacaaatttggtgacggc
tacgtagtgaccatgaaaatcaaggcagctaaagcaggcttgtccccagagctggagcct
gtggagagctttatggagagctctttccccggctgtgttcagcgggagaaacactacaac
accctgcagtatgaaatcgcctcatcctccctggccaggatctttcaggtggtggtggcc
aataaagagaggctcagcattgaagactactccgtgtcccagacaactctggaccaggtg
tttgtcaactttgccaagcaacagacaggagaggatgaaaatgtcacgttacacagacgg
aaaggacactcaagaaaagatgtgaagatctcaccagcaaggagaaacaaatga
DBGET
integrated database retrieval system
