Nematolebias whitei (Rio pearlfish): 119415367
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Entry
119415367 CDS
T08042
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119415367 (cdhr5b)
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Cadherin related
119415367 (cdhr5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Hum_adeno_E3A
Imm70
Motif
Other DBs
NCBI-GeneID:
119415367
NCBI-ProteinID:
XP_037538427
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All DBs
Position
10:635468..685544
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AA seq
735 aa
AA seq
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MDRVHALIFCFLLIQMSIVAAQSGCSPNTTATIAENNHVGAVVATIPIETGVTLTYSPNN
PPDFPFAIDGNQLIATSVLDFETMISPFMVGIVCTRETSVDYTIYVFVQNVNDNPPVFDK
ILYTPTINEMSPIGSTVGNFDATDQDQDQLYYRLTTESTYFKLKLPTIPEILVDAQLDYD
KIKQVELVLQAQDTKFDSPPEDISFTATTTIMISILDIDNRPPWYQPCSRREVGGTVVCE
SSGYTGRVYLNEQETGALPLKPGPLYAIDGDMGIDEDITYSFLSGDEDNLLEINPNTGNV
TMLRPADVLGPISLTVLAAQRTNVHQFTTTSLTISVQVESLHAPQFQRPQYEALITSKGS
MAIDPRNQQPLQILATDQDYASTGGLNPHMTYSVEGSSSFAIVGGYLFMTEDLPEDTLSL
QILAKDTSNDETATAQLQVELKLGSSTTSLPLSTTDIMTITSVGQSTSNSKTTHEILPTT
NEHSSLSTGVSATSHSLTKMPSGEFRGSDMAALSATLGVLLFVCLLVIGLLVCHVRRGKA
DWKKIQEVTMFRSSLGQSSGGPKEGVQYTNEAFHKDEDGSSVGSGGPEVGNTTAGGYPPK
MDWNHPSKEVPQRSSAPLPPLLPDASDNNSDKADDEKDVKPILTKERRVEEGYKSVWFKE
DIDPNAKEEVVIIPDSREEDSDEEDEEQNVSEMKRYRMKAPKVGFADTDLDSGLGVKMDN
PGEDSENNHDLNVDL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggacagggttcatgcactcatcttctgcttcctcctgattcagatgtccatcgtggca
gctcagtccggctgttctccaaatacaactgcaaccatcgcagaaaacaaccatgtgggg
gctgtcgtggcaacaatccccatcgagaccggagtgaccctcacctactccccaaacaac
ccccctgatttcccttttgcaattgatggaaaccagctgatagctacgagtgtgttggac
tttgagacgatgatttctcctttcatggttggcatcgtatgcactagagaaacttcagtc
gattacaccatttatgtatttgtacagaatgtaaacgataacccccccgtgttcgacaag
atcctgtatacaccaaccatcaatgagatgtcccccataggttccactgtgggtaatttt
gatgccacagaccaggaccaggaccagctgtactacaggctgacaactgaatctacttat
ttcaaactgaagttaccaaccatcccagaaatcctggttgatgcacaacttgactacgac
aagattaaacaggttgaactggtactccaagctcaggacacaaagtttgactcaccgcca
gaagatatctcgtttacggccaccacaaccatcatgatttccatcttagacattgacaac
agaccaccatggtaccagccttgcagcagacgtgaagtggggggaaccgtggtctgtgag
agttctggctacaccggcagggtttatttaaatgaacaagagactggggcattacctttg
aaaccaggaccactttatgccattgatggagacatgggaatagatgaagacataacgtac
tccttcctcagtggagatgaagataatctgttggagatcaacccaaacacaggaaacgtc
acaatgttgaggccagctgacgtgttgggaccaatcagtctgacagtcctggcagctcag
aggacaaacgttcatcagttcaccacaacctctctcaccatcagcgtgcaggtggagagc
cttcatgctccacagttccagaggccgcagtacgaagctctgatcacctcaaagggctcg
atggccatcgacccgaggaaccagcagccattacagatcctggccacagaccaggactac
gcttctactgggggtctgaatccccacatgacttactcagttgaaggtagcagcagcttc
gccattgttggtggttacttgttcatgactgaagatctcccagaggacacgttatctttg
caaattttggccaaagacacatccaatgatgagacggctacagcgcaactccaagtagag
ttgaagttaggttcctccaccaccagtttgcccctgagcactacagacattatgaccata
acctcagtaggacaatccaccagcaacagcaagacgacgcacgagatcctgcccacgacc
aacgagcacagcagtctgtccactggtgtgtcagccaccagccacagcctaacaaagatg
ccatcgggtgaattcagaggatcggacatggcagcgctcagtgcgaccttgggtgttctt
ttatttgtttgtctcttggtcattgggctcctcgtttgtcatgtgcggagggggaaagca
gactggaagaagatccaagaagtgaccatgtttcgaagctctctgggccaaagctcagga
ggtcccaaggagggagttcagtacaccaacgaggctttccacaaagatgaggacggaagc
agcgtaggttcagggggtccagaggtgggaaacaccacagctggtggatacccaccaaag
atggattggaaccaccccagcaaagaggtgccccagaggtcttctgcaccactgccccca
ctgctgcctgacgccagcgacaacaactcggataaggctgatgacgagaaagacgtgaaa
cctatcctgaccaaggaaaggcgggttgaggagggatacaagtctgtctggtttaaggag
gacatcgatcccaacgccaaggaggaggtggttatcatcccagacagcagagaagaagac
agcgatgaggaagatgaggagcaaaatgtatccgaaatgaaacgttaccggatgaaagct
ccaaaggttggcttcgctgacacagatctggacagtggactcggggtgaagatggacaat
cctggagaggattcagagaacaaccacgatctgaacgttgatctgtga
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