KEGG   Nematolebias whitei (Rio pearlfish): 119415394
Entry
119415394         CDS       T08042                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Pathway
nwh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119415394 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nwh03019]
    119415394 (wdr61)
Messenger RNA biogenesis [BR:nwh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     119415394 (wdr61)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_Vps41 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_ACSF4 WD40_RFWD3 Tricorn_2nd Beta-prop_NWD2_C Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Nup120_160 PROPPIN Ge1_WD40 NBCH_WD40 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Cytochrom_D1 WD40_like WDR54 VPS8_N Beta-prop_IFT122_2nd Beta-prop_pof12 Beta-prop_DCAF12 DUF2415
Other DBs
NCBI-GeneID: 119415394
NCBI-ProteinID: XP_037538458
LinkDB
Position
10:4636030..4643230
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGKSEADGSETIITGSLDDMVKVWKWSDEKLELQWTL
EGHQLGVVSVDISRNGAIAASSSLDAHIRLWDLESGKQIKSMDAGPVDAWSVAFSPDSKH
IATGSHHGKVNIFGVESGKKEYSLDTRAKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
SPNDTHFVSSSSDKSVKVWDASSRTCINTFFDHQDQVWSVKYNSNGSKIVSAGDDRAIHI
YDCPS
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagtacacaatatagcattctgttcaagcaagaacatgcacacgatgatgccatctgg
acagcagcgtggggaaaaagtgaagcggacggctccgagaccatcatcaccggttctctt
gatgatatggtgaaggtgtggaaatggtcggatgagaagctggagctgcagtggactctg
gagggccaccagctgggtgtggtctcggtggacatcagtcgtaacggagccatcgccgcc
tccagctccctcgatgcacacatccgcctctgggacctggagtcgggaaaacagatcaag
tccatggacgcaggaccggttgatgcgtggtcggtcgccttctcaccggactccaaacac
atcgccacaggaagccatcacggtaaagtcaacatcttcggtgtggaaagtgggaagaag
gaatactccctggacacgcgagcaaaattcatcctgagcatagcttatagtcctgatggg
aagtatctggccagcggagctatcgatggaatcatcaacatcttcgacatcgccaccggg
aagctgctccacacactcgaaggtcacgccatgcccatcagatccctcaccttctctcca
gactcccagctgctggtcacagcctccgacgacggctacatcaaaatatacgacgtgcaa
cacgccaacctggccggcacgctgagcggacacggatcctgggttcttaatgtcgccttc
tcccccaacgacacccacttcgtctccagctcatctgacaaaagtgtgaaggtttgggac
gccagctccagaacttgcatcaacactttcttcgaccatcaggaccaggtgtggagcgta
aagtacaacagcaacggctccaagatcgtctctgctggcgacgaccgcgccatccacatc
tacgactgcccgtcgtga

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