Nematolebias whitei (Rio pearlfish): 119415415
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Entry
119415415 CDS
T08042
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A
KO
K07277
outer membrane protein insertion porin family
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119415415 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119415415 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nwh02000
]
119415415 (samm50)
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
119415415 (samm50)
Transporters [BR:
nwh02000
]
Other transporters
Pores ion channels [TC:
1
]
119415415 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
119415415
NCBI-ProteinID:
XP_037538480
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All DBs
Position
10:complement(5655921..5664006)
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AA seq
469 aa
AA seq
DB search
MGTVHARSLDPLPMRGPELGIQADDIEALEIEPEPKQEVLENKDVVVQQVHIDGLGRTKE
DFLTYEIAEVFRAKSLIDVMRKSHEARQRLLRLGIFRRVEVVIDTCRGEDALPNGLDVTF
EVTELRRLTGNYNTMVGNNEGSMVLGLKSPNVFGRAEKLTFQFSYGTKETSYGLSFFKPQ
PGHFERNVSVNVYKVAGQFPWSSLRETDRGVSTELSFPLWKTNQTLKWEGVWRELGCLGN
TASFAIRQESGHSLKSSLSHAMVIDTRNSSIFPRRGGLLKIHQELAGYTGGDASFLKEDF
EIQLNKTLVWDSVLSASLWGGLLLPIGDKSTSIADRFYLGGPTSIRGFSMYSMGPQSDGD
YLGGEAYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPQAHLKKLAE
CIRWSYGLGIVLRLGNIARLELNYCIPMGVQNGDRICDGFQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtccatgccaggagcctcgaccctctgcccatgcgcgggccagagttggga
attcaagccgatgacattgaagcgttggagattgagccggagcccaagcaagaagttctt
gaaaacaaagacgttgttgttcaacaagttcacatagatggactcgggagaactaaggaa
gactttctgacttatgaaattgcagaagttttccgggcaaaaagcttgattgatgtgatg
cgaaagtcccacgaagctcgtcagaggctgctgcgtctcggtatcttcagaagggttgaa
gtcgttatcgacacatgtcgaggtgaagacgctcttcccaacgggcttgacgtgacgttt
gaggtcactgagctgagacgtttgacgggcaactacaacactatggttggaaacaacgaa
ggaagcatggttcttggtctgaagtcacccaatgtgtttggtcgagcagaaaaactgaca
ttccagttctcttatggcaccaaagaaacatcctacggtctttccttctttaaacctcaa
ccaggacactttgaacgcaatgtgtccgtcaacgtgtacaaagtagcaggtcagtttcca
tggagctcgctgagggagacggatcgaggcgtctctacagaactgagcttccctttgtgg
aagaccaaccaaaccctgaagtgggaaggcgtgtggagagaactgggctgcctggggaac
acggcctcttttgccattcgtcaggagagcggccattccctcaaatcctccctttcgcat
gctatggtcattgacaccaggaactcctccatctttcccaggagaggtggattattgaag
atccatcaggaacttgctggttacactgggggtgatgccagtttcctgaaagaggacttt
gagatccagctcaacaaaactctcgtctgggactctgtcctgtctgcgtcattgtgggga
ggcctgcttttacccattggtgacaaatcaacttctatagcagacaggttctaccttggt
gggcccaccagtatcaggggattcagtatgtacagtatgggtccacaaagtgacggagat
tacctgggaggtgaggcttactgggctggaggtctccacctctacacacctctacccttt
agaccaggcaggggaggctttggtgacctcttcagaacccacttcttcctcaatgccgga
aatctttgcaacctcaactatggtgaaggacctcaagcacatttgaagaaacttgcagaa
tgcatccgctggtcgtatggactgggcattgtgctgcgtttggggaacattgccaggctg
gaactgaactactgcattcccatgggagtccagaatggagacaggatatgtgatggtttc
cagtttggagcaggaatccgattcttgtga
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