Nematolebias whitei (Rio pearlfish): 119415448
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Entry
119415448 CDS
T08042
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04115
p53 signaling pathway
nwh04120
Ubiquitin mediated proteolysis
nwh04137
Mitophagy - animal
nwh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119415448 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119415448 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119415448 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
119415448 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119415448 (siah1)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119415448 (siah1)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119415448 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
119415448
NCBI-ProteinID:
XP_037538516
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All DBs
Position
10:8494986..8508778
Genome browser
AA seq
286 aa
AA seq
DB search
MDEEMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQ
SGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTE
HEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAV
DWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTW
EATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatgagtcgtcagaccgccaccgcgctgcccacaggaacatccaagtgc
cccccctctcagcgcgtgcccaccctgtcgggcaccaccgcctccaacagcgacctggcc
agcctgttcgagtgtcccgtctgcttcgactatgttcttccccccatcctgcagtgtcag
tcagggcacctggtgtgttccaactgccggcccaagctcacgtgctgccccacctgcaga
ggccccctgggctccatcaggaacctggccatggagaaggtggccaactccgtcctcttc
ccctgcaaatacgcctcgtcgggctgcgaggtcacgctgccgcacaccgacaagacggag
cacgaggagctgtgtgagttcaggccgtactcctgcccctgcccaggggcctcctgcaag
tggcagggctccctggacgccgtcatgccgcacctgatgcaccaacacaagtccatcacc
acactgcagggcgaggacatcgtgttcctggccacggacatcaacctgcccggcgccgtg
gactgggtcatgatgcagtcctgcttcggtttccacttcatgctggtcctggagaagcag
gagaagtacgatggacaccagcagttcttcgccatcgtgcagctcatcggcacccgcaag
caggccgagaacttcgcctaccggctggagctgaatggccaccggcgccgcctgacctgg
gaggccacgccccgttccatccacgagggcatcgccacggccatcatgaacagcgactgc
ctggtgtttgacacgtccatcgcacagctgttcgccgagaacggcaacctgggcatcaat
gtcaccatctccatgtgctga
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