Nematolebias whitei (Rio pearlfish): 119415794
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Entry
119415794 CDS
T08042
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03022
Basal transcription factors
nwh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119415794 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
119415794 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119415794 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119415794 (gtf2h1)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119415794 (gtf2h1)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119415794 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
119415794
NCBI-ProteinID:
XP_037538894
LinkDB
All DBs
Position
10:complement(29909191..29921839)
Genome browser
AA seq
550 aa
AA seq
DB search
MTSLSEEVLLVVKKVRQKKQDGTLYLMAERIAWSPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFVNESTALKDREAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLGGMNNGEPAPYSNKQDVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRISTGMQ
DIFTECAKQDEKGLKSLVNQGVKNPLVDLLSLEDKTLDEGYGISTAVPSTSNANKTVKES
SNSAIIKRFNHHSAMVLAAGSRRGDAPTDQASETSSTDGNSRDSDFFQPPLKKVKLQEAI
EYEDLQRENKPKMVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVSYIQHEMANYKPNL
TQVLSCAAASSAIAALSPGGVLMQPVGPQAINQMISTELQGELKHLYVAVGELLRHFWSC
FPVNTPFLEEKVIKMKSNLERFQITKLRPFQEKLQRQYLSTNLTGHLEDMLQAAYTKFHI
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacatctctgtcagaagaggtgctgctggtggtgaaaaaggtccgtcagaagaagcag
gatggcactctgtatctgatggctgagagaatagcctggagtccagaaggcaaagaccgc
ttcacagtcagccacttgtacgcagatatccgctgtcagaagatcagccctgatggcaaa
gccaaaattcagcttcagctggtccttcacaccggcgagagtaccacattccactttgtc
aatgagagcactgcactcaaagatcgagaagctgccaaggagctgctgcagcagctactg
ccaaagttcaagaagaaagccaacaaggaactggaggagaaaaacaggatgcttcaagaa
gatcctgtacttttccagctgtacaaagacctcgtggtgagccaagtgatcagtgctgag
gaattttgggccaaccggttaggaggcatgaacaacggagaacctgcaccttacagcaac
aaacaggatgttggtatatctggagcatttctggccgacattagacctcagactgatggc
tgtaatggtttgagatacaatctgacagctgatatcattgagtccatttttagaacttat
cctgcagtgaagcagaagtatagtgaaaatgtgcctcacaacctgacggagaaagagttc
tggacccgctttttccagtcgcattattttcacagagaccgcatcagtacggggatgcag
gatattttcacagagtgtgccaagcaggatgagaaaggtttaaagtctttggtgaatcaa
ggcgtgaagaatcctttggttgacctgctctcactggaagataaaacattagatgagggt
tatggaattagcacagctgtaccctcaacctctaatgccaacaagacggtgaaggaaagc
agcaactctgcgattatcaaacgattcaaccatcacagtgccatggtgctggcagcaggc
tcgcgcaggggggatgcgccaactgaccaggccagcgagacgagcagcacagacggaaac
tcaagagattccgacttttttcagccgcctcttaagaaggtaaaactacaagaagccata
gagtatgaggatctgcaaagggaaaacaaaccaaaaatggttgcattaaacctgaagaag
tctgacaggtacgctcatggtcccgtgccgcttcagtcccagcagtacacaaccagtcag
gatatcatcaactctgtcagctacatacagcatgagatggcaaactacaaacccaacctc
actcaggtgttgtcctgtgcagcagctagttctgccattgcagcgctctctccaggaggt
gtcctcatgcagcctgttggaccacaagccataaaccagatgatatccacagagcttcaa
ggagagttaaaacatctttatgttgctgttggagaattattgagacacttctggtcctgc
tttcctgtaaacacgccatttttagaggaaaaggtgataaaaatgaagtcaaaccttgag
agatttcagataaccaagcttcgtccttttcaggaaaaactccagcgtcagtacttaagt
acaaaccttacagggcacttggaggacatgttgcaggctgcctataccaagtttcacatc
tggcaaacccgcaggatgatgaggaaaacctga
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