Nematolebias whitei (Rio pearlfish): 119415899
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Entry
119415899 CDS
T08042
Symbol
afg3l1
Name
(RefSeq) AFG3-like protein 1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119415899 (afg3l1)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nwh03110
]
119415899 (afg3l1)
Peptidases and inhibitors [BR:
nwh01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
119415899 (afg3l1)
Chaperones and folding catalysts [BR:
nwh03110
]
Other chaperones and cochaperones
AAA proteases
119415899 (afg3l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_22
AAA_16
TIP49
RuvB_N
AAA_2
AAA_14
nSTAND3
AAA_28
AAA_17
LonB_AAA-LID
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
119415899
NCBI-ProteinID:
XP_037538998
LinkDB
All DBs
Position
10:2697097..2718940
Genome browser
AA seq
732 aa
AA seq
DB search
MCTRILGAGVVHPESSYRLYWKGSYCAYGKDGGGAGGGEGGGGGGAEGGGGGKKKTGGGK
KGATDWTKRLKEGDFPWDEKDFRYFVLTVTGVVPLLLYLYFRDNSREITWKDFVQRYLAQ
GWVERLEVVNKQFVRVNLVPEAGVEAEASIVWFNIGSVDTFERNLEAACVEQNLEPSQQP
AVVYSSESDGSLLMNVIPTLLLISFLIFSVRRGMTGGAASRSRNPFRMGESTAKIMENIE
VKFKDVAGCEEAKLEILEFVNFLKHPQQYQDLGAKIPKGAVLSGPPGTGKTLLAKATAGE
ANVPFITVNGSEFLEMFVGVGPARVRDMFTMAKKNAPCILFIDEIDAVGRKRGGSNFGGQ
SEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGRA
SIFKVHLRPIKLDSSMDKEALARKMAAATPGFTGADIANVCNEAALIAARHLSPAVNAKH
FEQAIDRVIGGLEKKTRVLQPTEKKTVAYHEAGHAVVGWFLQHADPLLKVSIIPRGKGLG
FAQYLPREQYLYTKEQLFDRMCMMLGGRVAEEVFFSRITTGAQDDLKKVTQSAYAQVVQF
GMSDKVGQISFDLPRQGDVVMEKPYSEATAELIDEEVRRLVEQAYERTLQLVKDKKDMVE
MVGKRLLEKEVLDKADMVEILGQRPFLEKSTYEEFVEGTGSLEEDTSLPEGLKDWNKDRE
EAEETSPTPEKV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacccgtattctgggcgcaggagtggtgcacccagaatcttcctatcgcttgtat
tggaaggggagctactgcgcatatggaaaagatggaggaggagcaggaggaggagaagga
ggaggaggaggaggagcagaaggaggaggaggaggaaaaaaaaaaacaggcggagggaag
aaaggagcaacggattggacgaagagactaaaggagggtgacttcccctgggatgagaag
gatttccgatactttgtgttgactgtgaccggagtcgtcccgcttctactctacctgtac
ttcagagacaacagcagagagatcacctggaaagactttgtccaacgctacctggcccaa
ggctgggtggaacgactggaggtcgtcaacaagcagtttgtcagagttaacctggtgccg
gaagcgggagtggaagcagaagccagtattgtctggttcaacattggcagcgtggatacg
tttgagaggaatctcgaggctgcgtgcgttgagcagaacctggagccatctcagcaacct
gccgttgtctacagctctgagagcgacgggtccttactgatgaatgtaatccccaccctg
ctgctcattagcttcctgatcttctcggtgcggcgaggcatgacgggaggtgctgccagc
cgttcacgaaaccccttcagaatgggtgagtccacagccaagataatggagaacattgag
gtgaagttcaaggacgtggccggctgtgaagaggccaagctggagatcctggaatttgtc
aacttcctgaagcacccacagcagtaccaggacctcggagctaagatccctaagggcgcg
gtgctgtctggacctcctggaacagggaagacgctgctggccaaagccacggcaggagag
gccaacgttccctttatcacggtgaatggctccgagttcctggagatgtttgtgggagtg
ggacctgccagggtgagggacatgtttaccatggcgaagaagaacgcgccctgcatcctg
tttatcgatgagattgatgctgtgggcagaaagaggggagggagcaactttggaggtcag
agcgaacaggagaacaccttgaaccagctgctggtagagatggatggttttaacacggct
actaatgtggtggtcctggctggaaccaacaggcccgacgtcttggatccagctttgatg
agacccggacgctttgaccggcagatttacatcggtcctccagacatcaaaggcagggct
tcgatttttaaagtccaccttcggccgatcaaactggattcctctatggacaaggaagct
ctggccaggaaaatggctgctgccacgcccggattcactggtgctgacattgcaaacgtc
tgcaacgaggcggctctgattgctgccagacacctgagtcctgccgtcaacgccaagcac
tttgagcaagcaatcgaccgggtcatcggaggtctggaaaagaagactcgggtcctgcag
cccacagaaaagaagaccgtagcgtaccacgaggctggtcatgctgttgttggttggttc
ctgcaacatgccgatcctctgctcaaggtgtcgatcatcccgcggggaaagggtctgggc
ttcgctcagtacttgcccagggagcagtacctctacaccaaagagcagctgtttgacaga
atgtgcatgatgttgggaggacgggtggctgaggaggtgttcttcagtcgcatcaccacc
ggagcgcaagatgacctgaagaaggtcacacagtctgcctacgctcaggtggtgcagttt
ggaatgagtgacaaagtgggccagatttcgtttgacctgcctcgacagggtgacgtggtc
atggagaagccgtacagcgaggcgacggccgagctgatcgacgaggaggtccgaaggctg
gtggagcaagcgtatgagcgcaccctgcagctcgtcaaagacaagaaggacatggtggag
atggtgggaaaacgtctgctggagaaggaagtgctggacaaggctgacatggtggagatc
ctcggccagcggccgttcctggagaagtcgacgtacgaggagtttgtggagggaacgggg
agcttggaggaggataccagcctcccagaaggtcttaaagactggaacaaggacagagag
gaggctgaggaaacgagtccgactccagagaaagtgtag
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