Nematolebias whitei (Rio pearlfish): 119415914
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Entry
119415914 CDS
T08042
Symbol
cspg4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nwh00535
]
119415914 (cspg4)
04091 Lectins [BR:
nwh04091
]
119415914 (cspg4)
Proteoglycans [BR:
nwh00535
]
Cell surface proteoglycans
Others
119415914 (cspg4)
Lectins [BR:
nwh04091
]
C-Type lectins
Others
119415914 (cspg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
DAG1
Motif
Other DBs
NCBI-GeneID:
119415914
NCBI-ProteinID:
XP_037539011
LinkDB
All DBs
Position
10:4310598..4411017
Genome browser
AA seq
2247 aa
AA seq
DB search
MMRALHPALVGALLTLLLICLPSPGHGESYFGDSFCHLQAVQDVSTFQLSLQIKTSRRSG
LLLLAAGMEDYLFLELLNGKIQARMNLGAGEVQLSSSQGVQLNNLVHHKVSLTFQDGQLT
MTIDDLYPTYVPVDDDGEKLNIDLGIWLGGTGDLDVLYLSNAIPPFRGCMTDIKFVSHQF
DILTSAFKQCHDTKESCSSEFEAGDGEAISFSTPDSFVSFPTWSGAAGAPKTLEFLMKTT
IEDALLVFHHGQESDFIAIGVAKGHLKGVIDLGGGMEELDNTQIQLDDDQWHRIKVQLNP
DSFSLNIDSQSSSIPLDSSEKLNLVGTLYIGGIQGKMKEVFRESGSLSRFEEHMTSESFI
GCLGEIKVNQKDRSLQDALVTKDVHVKCEGEDYDYSSYYDGDITTTSPPVSILYTDPTLK
DQDCYPTDDWPEIFRNVTKFLDIAPLRVPEGGEMFLDFYNLNPTFDLGSAGIRQSQVIFT
LEGDPWYGLVDINVSRKHMKKFTLLDVVNKKIKYMHDGNERHEDQIQLEVIVQGIDYLPE
CLKTTQKYTLPVVILPAEELPQVSEEIIIIAENARTRMSPSLIKVLDSDFSCEQSVVMVT
REPSTNFGHLENDEQPGRSISEFTCRELRDGTIYFIHREGDSDEITIQVSDGQSVIQSST
FKLLVTQPHIVFTSNSGLTLFQGGNASIGVQNLGILPQPRDGDIMYNLTQPPRFGELKIK
TSNGVYKQVTSFHQSHLEQELIRYFSTDSSNQEDTVMDEFRFGAHLGQLSFMNNSLLVMI
FPATVKILSKGSLKIKPGEKKIIGSTMLQAQVMNKHLDPQTVKYILVKAPTLGSLQLSDK
ELVEGGMFTQKDILDNAISYKVQKQTDVDSPDQFQFRVHAEDQYSPLYTFPINIFASLDE
NVLTIKELVVFQGGEQTLNKNYLWLQSQSSTEFLYQVKQEPKHGRLIRDSPPGEPRFDEA
IRVFSNEDLQHNRLIYKHDGSKTSSDEFHFVANDRSTDISETVTGVFRILIQSKNEHAPV
RIVDKVLKVVRHSQRLLTTDVIKFKDDDSGFNDTQIVYAREGILSGNIVSASNPQQPLFR
FTQADLRDKKILFVHRGADRERFPLQVSDGFHKTTALLEIQAGEPYLHVVSNATIDIDHG
STTTLDTSLLSADSNMDIRDDSKIKFQITLPPSDGRIIVSGIEALEFTQEDLKKGVVSYE
HNYESLRSRDSFSFTVQAKGHSEEGTFKIKILKEGYLSELEVITNELIISYEGEHTIISQ
DHLKVEQEDSLPTEMMFTVKMPPRLGHVVMLKNSSDETASPVLDYIHSFSQEDIDQGHIL
YVSSSIQGYDSFTVDVSNGVNTVEDLQVTINIVPRFIPIQTFNFSVKEGLSKAINEEIVN
ISHPFYSSANIDFFVEEPPQHGELRNLDGDELTYFTWDEVKLGRVIYMHDSTETTEDSFT
LSASAYEIERRSHPVAISITIIPVNDEAPKLTRNTGLEVLAGEEADITSSMLSTEDADTP
AEELVYHVEMPTNGMVALKEEPEESVLNFTQAHINKGEVVFIHEGEESGGFSFTVTDGEH
TSPLYLFAVTARPLTITMVTKEELVVFPGTRQPITRANLGAKTSEDGNEINFLLVRPPRF
GRLLVARNKNQHEETKQFSQSQTNCEVLHGLEVVQGQSKTIDSTILDASNLLASVPEANR
VDVDVVFEIKRFPSHGRITLNGEDLPRKAPTFMQQDVSEGKLDYLHDDSGVASDSFSFRA
RLKSEGRGVSSPAESVVLEEVFHVSVKQRGSDPPELVTTDMLFEVLQGSMTVLTQNHLNT
QDEDSPPDEVHFKVTKAPGNGNLVNPITLESIAEFTQEMVNRGEVGFSSDGSLKEGFLEF
VVSDGEHQTEPFTLHIGILARKLLLGKVSEIKVKQGDDQTLVTEDLLKATTGGPVEEDIL
YKITSVPKYAAIMVDRQPTSAFTQKQISEGRVSVRFVKSTSPRDSISFTARSRAANASSV
LNITVQPLAKIAQDPLLPRDTIVQLDRNLLDATLLANKTRTSPTFTIIQQPKGARFLTSG
GPGAGHPVDSFSQKDLNEGRVAMEILDGASGSQDGVNQDEARFLLKAHGVPPAECVLSFH
TGPYNASGVYPATLLRTPYNRDHPDWSLGDHLTTASPDSGSHGNPHVSRRNNFWSIFIPI
LIVLLLLLLAAVLAYYLIRKNKTGKHDVQTAAFKPKNGEVATTETFRKTDPANNIPMTNV
DSKDADPELLQHCRTSNPALKKNQYWV
NT seq
6744 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagcgctgcatccagccctggtcggtgccctgctgaccctgctgctgatctgc
ctccccagccctggtcatggagaatcctactttggagacagcttctgccatctacaagcc
gtccaagatgtctccaccttccagctgtctctacagatcaagacaagccgccgaagtggg
cttctgctcttggctgcaggaatggaggattacttgttccttgagctcctaaatgggaaa
atacaggcacgaatgaacctgggggctggggaagttcaactgtcctcatctcagggagtg
cagctcaacaaccttgtgcaccacaaagtgtcgctgacttttcaagatggccagctcacc
atgaccattgatgatctctaccctacatatgtccctgtggatgacgatggagaaaagctc
aacatcgacctgggcatttggcttggagggacaggagacctggatgtcctctacctcagc
aatgcaatccctcccttccgtggttgcatgactgacataaaatttgtgtcccatcagttt
gacatcctcacctcagcatttaagcagtgccatgatacaaaggaatcctgcagcagtgag
tttgaggctggggatggggaggcaatcagtttcagcactcctgattcctttgtatccttt
cctacatggagtggggctgctggtgctccgaaaacgttggagtttctaatgaaaaccacc
atagaggacgctttacttgtttttcaccatggtcaagagtcagacttcattgctatcggt
gttgcaaaaggccatcttaaaggtgtaatagaccttggaggaggtatggaggaacttgac
aatacacagatacagctggatgatgaccagtggcatagaattaaggttcagctcaaccca
gactcttttagtcttaatatagacagccagtcatcctccattccactcgactcatcagaa
aaactgaacttggtaggaaccttatatattggaggcatccagggaaaaatgaaagaagtc
tttcgtgagagtggctcgttgagtcgttttgaggaacacatgacatctgaatctttcatt
ggatgcttgggggaaatcaaagtaaatcagaaggatagaagcctgcaggatgctttggtg
acaaaagatgttcatgtcaaatgtgaaggcgaagactacgattactcaagttattatgat
ggagacataacaacaacctccccacctgttagcattctatatactgaccccacattgaaa
gaccaagattgttatccaacagacgactggcctgagatattcagaaacgttactaaattt
cttgacatcgcccctctgcgtgttccagaaggtggagaaatgtttcttgatttttacaac
ttaaaccctacgtttgacctgggttctgcaggaatccgtcaatctcaagttatctttact
cttgagggtgatccctggtacggcctggttgatatcaatgttagcaggaaacacatgaaa
aagttcaccctcctagatgttgtcaacaagaaaattaagtacatgcatgatggaaatgaa
agacatgaagaccagattcagcttgaggttattgttcagggtattgactaccttccagaa
tgtctaaaaactactcaaaagtatacacttcctgttgtgattcttccagctgaagaactg
ccacaagtcagtgaagaaataattatcattgcagaaaacgccaggactcgtatgagtccc
agtcttatcaaagtcttagattctgactttagttgtgagcagtcagtagtaatggtgacc
cgggagccttccacgaattttggtcatttggaaaatgatgaacaaccaggaagaagcatc
tcagagttcacttgcagagagctgagagatggaactatctattttatacacagagaaggt
gacagtgatgaaatcaccatacaagtgtctgatggtcagtcagtaatccagtccagcaca
ttcaagttgttggtgacacaaccacatatcgttttcaccagcaactctggccttactttg
ttccaaggaggcaatgcatccataggtgttcagaatctgggtattctccctcaacctcgt
gatggagacatcatgtataacctcacacaacctccaaggtttggtgaactgaaaatcaag
acaagcaatggtgtgtacaagcaagttacaagtttccaccaatcccatctagagcaagaa
cttattagatacttcagcacagattcaagtaaccaggaagacactgtgatggatgagttt
cgatttggtgcccatctgggccagttgtcttttatgaataacagccttttagtcatgatt
ttccctgcaacagtgaagattttaagcaagggctcacttaaaatcaagcctggtgaaaaa
aaaattattggatccacaatgcttcaggcacaagtaatgaataaacacttggatccacaa
acagttaaatacatccttgtcaaagctccaacactcggtagtctccaactgtcagacaaa
gagctggttgaaggtggcatgttcactcagaaagacattttggacaatgccatcagttac
aaagtccagaagcaaacagatgtggatagtcctgaccagtttcaattcagagttcatgca
gaggaccagtactctcctttatatacattcccaattaacatttttgccagtttggatgaa
aatgttttgactatcaaagagttggtagttttccaagggggtgagcagactttgaacaaa
aactacctttggcttcagtctcaaagttccacagaatttttgtatcaggtcaaacaagag
ccgaagcatggacgactgatcagagactccccgcccggagaaccgagatttgatgaggcc
attagagtttttagtaatgaagatctccagcataacaggttgatatacaagcatgatggc
tccaagacgagcagtgatgagtttcattttgtagcaaatgatcgaagtacagacatctca
gaaacagtgacaggtgtcttcagaatactgatccagtccaagaacgagcacgctcctgtc
agaatagtggataaagtcttgaaagttgtccgccacagtcagcgcctgctcacaactgat
gtcattaagtttaaagatgatgactccggtttcaatgacactcagattgtctacgctcga
gagggaatcctctcaggaaatatcgtctcagcatctaatccacagcagccccttttccgt
tttactcaagctgacctgagagacaagaaaatccttttcgttcaccgtggagccgatcgg
gaacggtttccattacaggtgtcagatggcttccataaaaccactgctctgcttgagatt
caggccggtgagccctacctgcacgtggtcagcaacgcaaccatcgatattgaccacgga
agcaccacgactcttgacacaagtctgttgagcgccgactccaacatggatatcagggat
gacagtaagatcaagttccagattactttgccacccagtgatggcaggatcatcgtgagt
gggattgaagctttagaattcacccaagaggacctgaaaaaaggcgttgtgtcgtacgag
cacaactatgagagtctgaggtccagggactcattcagcttcactgtccaagcaaaaggt
cattctgaagagggtactttcaagattaaaatactcaaggaaggttacctttctgagctg
gaggtgatcaccaatgagttgatcatttcctatgaaggagagcacaccataatcagccag
gatcatctcaaggtggagcaggaggacagtctgcccacagaaatgatgttcacagttaaa
atgcctcccaggctcggtcatgtggtcatgctgaaaaacagttcagacgagacggcctcg
cctgtcctcgactacattcactccttttctcaggaggacattgatcaggggcacatcctt
tatgtgtcttcatcgattcagggctatgactccttcacagtggatgtcagtaacggtgta
aacacagtggaggacctccaagtcacaataaacatcgtgccccggtttattcccatccag
accttcaacttttcagtgaaggaaggccttagcaaagcaattaatgaagagattgtgaac
atctctcatcctttctatagctcagcaaacattgacttctttgtggaagaacctccacag
catggtgaactccgcaacctggatggggatgaactcacttactttacgtgggatgaggtg
aagctcgggcgcgtcatctacatgcacgacagcaccgagaccacggaggacagcttcaca
ctctctgcctcggcttatgagatcgagcgccgcagtcatcctgtcgccatctccatcacg
atcataccggtgaacgacgaggcgccgaagctgacacgcaacaccggcctggaggttctc
gctggcgaagaagctgatatcacctccagcatgctgagcacagaggatgcagataccccc
gcagaggagctggtttaccacgttgaaatgccaaccaatgggatggtggcattaaaagaa
gagcccgaggagagcgtcctaaatttcacacaggctcacataaacaaaggggaggtcgtc
ttcatccatgagggtgaagagtccggcggtttcagtttcaccgtgaccgatggagagcac
acatcacctctctatctgtttgccgtcacagccaggcctctcaccatcaccatggtaacg
aaggaggagcttgtggtgtttccaggaactcggcagcccataacaagagccaacctcggg
gctaaaaccagtgaggacgggaatgagatcaacttcctgcttgtccgtccgccccggttt
ggaaggctcctggtagccaggaacaagaaccagcatgaagaaacgaagcagttctcacag
tcacagacaaactgtgaagtgctccatggtttggaagttgtgcagggccagagcaaaacg
atcgacagtaccattcttgacgcctccaatcttctggcgagtgtgcctgaagccaatcga
gtcgacgtggatgtggtttttgagattaagcgttttcccagtcatggtcggattaccctg
aatggagaggacctgccacgaaaagctcccacgttcatgcagcaagatgtgtctgaagga
aagctggattacctccatgatgactcaggggttgcctccgacagcttttctttcagagcc
cgactaaagtctgagggccgtggcgtgtcgtcccctgctgagtctgttgttctggaggag
gtcttccatgtttcagtcaaacagcggggctcggacccccctgaactagtcacaacagat
atgctctttgaggttctccaaggctccatgactgtcttgactcagaatcatctcaacact
caggatgaagacagcccaccggatgaggttcacttcaaggtgaccaaagcacctggcaat
ggaaatctggttaaccctatcacactggaatccatcgctgagttcacacaagagatggtc
aatcgtggggaagtgggcttcagcagcgacggcagccttaaagaaggctttttagaattt
gtagtgtcagatggagaacaccaaactgagccgttcacgctacacatcggcattctggct
cgaaaactgcttcttggcaaagtctctgagatcaaggttaagcagggtgatgatcagact
ctagtaacggaggacctgttaaaggctacaactgggggcccggttgaggaggacatcctt
tacaaaatcactagcgttccaaagtatgcggctatcatggtggaccggcagcccacgtcc
gcctttacccagaaacagatcagtgaaggcagagtcagcgttcgctttgtcaagtccaca
tcacctcgagacagcatttcatttacagcccggagccgtgcagctaatgcctcctctgtc
ctcaacatcacagtacagcctttggccaagatcgctcaggatcctctgttacctcgggat
acaatcgtccagctggatagaaatcttctagatgcaactctactggccaacaagaccaga
acctcccccacattcacaatcatccagcagccaaagggcgctcgttttctgacatctggg
ggtcctggtgcaggtcacccagtggactcattcagccagaaggatctgaacgaaggtcgt
gttgcgatggaaatcttagatggtgcctctgggtcacaagatggtgttaatcaagatgag
gctcgcttcctactcaaagcccacggagtccctcctgcagaatgtgtgctttccttccac
acaggcccttacaatgcttctggggtttaccccgccactttactgagaactccctacaat
agggaccacccagactggtcccttggagaccatcttaccactgcatctcctgactccggc
tcccacgggaacccacatgtttcccgccgcaacaacttctggtctattttcatccctatc
ctgatagtcctccttctcttacttctggcagccgtcttggcctactacctgatccgaaaa
aacaagacgggcaaacacgacgtccagacggcagcatttaagcccaaaaacggagaggtg
gccacaacagagacctttcgcaaaaccgacccagccaataacattcccatgaccaacgta
gactccaaagatgcagacccggagctgttgcagcactgtcggacatcaaacccggccttg
aaaaagaaccaatactgggtttga
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integrated database retrieval system
