Nematolebias whitei (Rio pearlfish): 119416080
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Entry
119416080 CDS
T08042
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa
KO
K11644
paired amphipathic helix protein Sin3a
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119416080 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119416080 (sin3aa)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
119416080 (sin3aa)
REST complex
119416080 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
119416080 (sin3aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
DUF768
Motif
Other DBs
NCBI-GeneID:
119416080
NCBI-ProteinID:
XP_037539186
LinkDB
All DBs
Position
10:4562534..4587364
Genome browser
AA seq
1272 aa
AA seq
DB search
MKRRLEDQETVFATQQRRHAANVEALQQVHRLLAPAVYEAVTDNMQPTAGVQYSVPQGYQ
VPTVAQNSGGHGHTPSPAVHTAPHHHSPAVQSHGPSVMPGHGHTAAPPASSQGHQQFQRL
KVEDALSYLDQVKLQFGNHPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMG
FNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPITGAGTQHPPQPPSSAVKT
TAPPLPTQTTPAKMSKPPQPPALTTSSQTNPSIPVYTAPRSPPIPLHPPPSGTPTGPPMQ
NNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQE
VYAQVARLFKNQEDLLSEFGQFLPDANSSAMLSKTTAEKAESVKNDHGLTSKKLQLNNKQ
RLNQNGCPIRRHSTPGSTPPVKKKPKLLNLKDPSVADPGKHGVGTESLFFEKVRKALRSV
EAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKNFLGYREMSHMETYPKER
ATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTF
VSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETVQRKLSRMSAEEQAKFRLDNTM
GGSSEVVHRKAIQRIYGDKALDILDGLKKNPAVSVPIVLKRLKTKEEEWREAQRGFNKIW
REQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEENAASPSGPHL
TLSYEDSQILEDAAALIIHHVKRQTSIHKEDKYKIKQIIYHFIPDMLFSQRGELSDVEEE
EEEEEMELEEGAPKKHNGVSGGGSPSKSKLLFGSMAAQKLRGCDDAYNLFLVNNNWYIFL
RLHQTLCSRLLRLYEQAERQIEEDVRERDWEREVLGLKKEKNDNPATQLRLKEPMDIEVE
DYYSAFLEMVRNLLDGNMEPSHYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEI
CVRVTDLYLSESANGATGGSLSTQATRSAAEGTYQRKAEQLMSDENCFKVMFLRNRGQVQ
LTVELLDTEEENSDEPMEAERWSDYISRYLNPDSTTPELREHLAQKPVFLPRNLRRIRKY
QKGREQMDKEACEGGKKSLEKEKMECMFKLNSYKMVYVFKSEDYMYRRTALIRAQQSHER
VSTRLHKRFQAWVDAWLEENVPRDMIADTNEWLMGEGWDGLLPCTTTRHPELLHFMNVNK
YRVKYGTPSKAP
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccgtttggaggatcaggaaacggtttttgcgacgcagcagcggcgtcatgct
gccaacgtggaagctttgcagcaggtgcaccgcctcctggcccccgctgtgtacgaggct
gtgacagacaacatgcagcccacggctggcgtccagtactcagttccacagggataccag
gttcccactgtggcccagaacagtggtgggcacgggcacactccaagcccagcggtccac
acagcgccccaccaccacagcccggcagtgcagtcccacgggccctcggtgatgccggga
cacggacatacggcggctccaccggcctcttcacagggccaccagcagttccagaggctt
aaggtggaagatgctttatcttacttggatcaagtgaaactacagtttggcaaccatcct
caggtctacaatgactttttagatataatgaaggagttcaagtcccaaagcatcgacacg
cccggcgtcatcagcagagtgtcgcagctctttaaaggccaccccgacctcatcatgggc
ttcaacaccttccttcctccgggctacaagatcgaggttcagaccaacgacctggtcaac
gtgacgacgcccggtcagatccaccacatcaccccgcacggcatttcggtgcagaacatc
cccataacaggagcaggcacccagcatccgccacagcccccatcatctgctgtgaaaacc
accgctccgcctctgcccacacaaaccacacctgccaagatgagcaagcctcctcagcct
ccggcattaacgaccagcagccagacaaatccgtccatccctgtgtacaccgcccctcgc
tccccgcctattccgctccacccgccccctagcgggacccccacaggcccgcctatgcag
aacaaccagcccgtggagttcaaccatgccatcaattacgtcaacaagatcaagaaccgc
ttccagggccagcccgacatctacaaagccttcctggagattctccacacgtaccagaag
gagcagcggaatgcgaaggaggccggggggaactacacgccggctctgacagaacaggaa
gtgtacgctcaggtggccaggctcttcaagaaccaagaggacctgctctcagagtttggc
cagtttctgcctgacgccaacagttcagcaatgttaagtaagaccacagctgaaaaggca
gagtcggtgaagaacgaccacggtctcacctccaaaaagctgcagctcaacaacaagcag
aggctcaatcagaacggctgtccgatccggcgccactccactccagggagcacgcccccc
gtcaagaagaagcccaagttactgaacttaaaggacccgtcggtggcagaccccggcaag
cacggagtcggaaccgagtctctgttctttgagaaggtgcgtaaagccttgcgaagtgtg
gaggcctacgacaacttcctgcgctgtctggtcatctttaaccaggaggtgatctccagg
gctgagctggtgcagctggtgctgccctttctgggaaaattccccgagctgttcaactgg
ttcaaaaacttcctggggtaccgtgagatgtcccacatggaaacgtacccgaaggagcgg
gccacagagggcatcgccatggagattgattatgcttcctgtaagaggctcggctccagc
tacagagctctgcccaagagctaccagcagcccaaatgtaccggcagaactcctctctgc
aaagaggtcctgaatgacacctgggtgtccttcccctcctggtctgaagactccacgttt
gtcagctccaagaagactcagtacgaggagcacatctaccgctgtgaagatgaacgcttc
gagctggatgttgtcctcgagaccaacctggccaccatcagggtgctggagaccgtgcag
cggaaattgtcccgcatgtccgcggaagaacaggccaagtttcgcctggacaacacgatg
ggcggctcctcggaggtcgtccaccggaaagccatccagaggatatacggagacaaggcg
ctggacatcctggacggcctgaagaaaaaccccgctgtctctgtccccatcgtgttaaaa
cggttaaaaacaaaagaggaagagtggcgggaagcccagcgaggcttcaacaagatctgg
agggagcagaacgagaagtattacctcaaatctctggaccatcaaggcatcaatttcaaa
cagaacgacaccaaagtgcttcgatccaagtctttgcttaatgaaatcgaaagcatctac
gatgagcgtcaggagcaggcgtctgaggagaacgccgcctcgccctcaggcccccacctg
acgctgtcctacgaggacagccagatcctggaggacgcggcggcgctcatcatccaccac
gtgaagcggcagaccagcatccacaaggaggacaagtacaagatcaaacagatcatctac
cacttcatccccgacatgctgttctcgcagcgcggcgagctgtcggacgtggaggaagag
gaggaggaggaggagatggagctggaggagggggctcctaaaaagcacaacggcgtctcg
ggcggcgggagcccctccaagtccaagctgctgttcggcagcatggcggcgcagaagctg
cgcggctgcgacgacgcctacaacctgttcctggtcaacaacaactggtacatcttcctg
cggctgcaccagacgctgtgctcgcggctgctgcggctctacgagcaggcggagcggcag
atcgaggaggacgtccgggagcgggactgggagagggaggtcctgggcctcaagaaggag
aagaacgacaacccggccacgcagctccgactcaaggagcccatggacatcgaagtggag
gattactactcggcattcttggagatggtgaggaatttgttggacggaaacatggaaccg
tctcactacgaggactctctgagggagatgttcaccatccacgcctacatcgccttcacc
atggacaagctcatccaaagcatcgtgcggcagctccagcacatcgtgagcgatgagatc
tgcgtccgggtgacggacctctacctgtcggagagcgccaacggagccaccggggggtcc
ttgtccacacaggctacaaggagcgcggcagagggaacctaccagcggaaagctgagcag
ctcatgtcggatgagaactgcttcaaggtgatgtttctgaggaacagagggcaagtgcag
ctgacggtggagctgctcgacacggaggaggagaactcagacgagcccatggaggcggag
cgttggtccgattacatcagtcgctacttaaacccagattccaccactcctgagttaagg
gagcacctcgctcagaagcctgtgttcctcccacgaaacctgaggcggatcaggaagtac
cagaagggcagagagcagatggacaaggaagcctgcgaggggggcaagaaatccctggaa
aaggagaagatggagtgcatgttcaaactcaactcgtacaaaatggtctacgtgttcaag
tccgaggactacatgtatcgacgcaccgctctgattagagctcaacagtcacacgagagg
gtgagcacgcggctgcacaaacgcttccaggcctgggtggacgcgtggctcgaagagaac
gtcccccgcgacatgatcgccgacaccaacgagtggctcatgggcgaggggtgggacggc
ctgctgccctgcaccaccacccgccacccggagctcctccacttcatgaacgttaacaag
taccgcgtcaaatacggcacgccgagcaaggcgccgtag
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