Nematolebias whitei (Rio pearlfish): 119416103
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Entry
119416103 CDS
T08042
Symbol
aars1
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic isoform X1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119416103 (aars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nwh01007
]
119416103 (aars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwh03016
]
119416103 (aars1)
Enzymes [BR:
nwh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
119416103 (aars1)
Amino acid related enzymes [BR:
nwh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
119416103 (aars1)
Transfer RNA biogenesis [BR:
nwh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119416103 (aars1)
Prokaryotic type
119416103 (aars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
DUF6384
Motif
Other DBs
NCBI-GeneID:
119416103
NCBI-ProteinID:
XP_037539217
LinkDB
All DBs
Position
10:complement(8621311..8633696)
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AA seq
966 aa
AA seq
DB search
MDSSLSAAQIRQKFVDFFIRNEHQYVHSSSTVPLDDPTLLFANAGMNQFKPIFLNTIDPS
HPMAKLRRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALE
LLTQEFGISIDRLYVTYFGGNAEAGLEPDLECKQIWVDLGVEEVRVLPGSMKDNFWEMGD
TGPCGPCSEIHYDRIGGRDASHLVNMDDPNVLEIWNLVFIQFNRESETELKPLPKKSIDT
GMGLERLVSILQNKMSNYDTDLFQPYFEAIQKGTGARSYTGKVGADDVDGIDMAYRVLAD
HARTITIALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAKRGFFASLVDVVVDSLGEA
FPELKKDPDMVKDIINDEEAQFLKTLSRGRRILDRKIVSLGDCRTIPGDTAWLLYDTYGF
PLDLTSLIAEEKGLGVDVAAFEEEKKAAQLKSQGKGAGDADHIMLDIYAIEELRNKQVPA
TDDSPKYRYSSDENGNYEFQQTSATVLALRRDRAFCDEVTTGQECGVLLDQTSFYAEQGG
QTFDEGYILREDDNTEDRMEFTVKNTQVRGGYVLHIGTVYGALRVGDRVTLQVDEARRRP
IMSNHTATHILNFALRGVLGEADQRGSLVAPDRLRFDFTAKGALSTGEVRRTEEIAGALI
RDAKPVYAMDAPLAEAKAIQGLRAVFDETYPDPVRVVSIGIPVQELLDDPNSPAGSQTSI
EFCGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALLQALSALGDK
VKQQTVPNKDLQKEIADLTESLGTAVISQWQKDEMRDTLKGLKKTMDDLDRSYKADIQKR
VLEKTKEVIENNPNQPLLVMAMETGASAKALNESLKLLKSQSPQTATMLFTIDPEAGKIT
CLCQVPQEVASRGLKASEWVQELCPLLDGKGGGKDMSAQATGRNTLCLQEALQMANEFAR
LKLGEN
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtctttgagcgcagctcagatccgtcagaagttcgtcgactttttcatccgc
aacgagcaccagtatgtccactcctcatccaccgtcccactggatgaccccacgctgctg
ttcgccaacgctggcatgaaccagttcaagcccatctttctgaacaccatcgacccgtcc
caccccatggccaagctgaggcgtgcagccaacacgcagaaatgcatccgcgcaggaggt
aaacacaacgacctggacgacgtggggaaagacgtttaccatcacaccttcttcgagatg
ctcggctcctggtcctttggggactactttaagcatctggcctgtaagatggctctggag
ctgctgacgcaggagtttggtatttccattgatcgactgtatgtcacctactttggagga
aacgctgaagcgggtctggagccggacctggagtgcaaacagatctgggtggaccttggg
gtggaggaggtccgggtcctgccggggagcatgaaggataacttctgggagatgggcgac
actggcccctgcggtccctgcagtgagatccattacgaccggatcggagggagagacgcc
tctcacctggtaaacatggacgaccccaacgtgctggagatctggaacctggtcttcatc
cagttcaacagagagtccgagacggagctgaagccgctgcccaagaagagcatcgacacg
gggatgggtctggagcgcctggtgtccatcctccagaacaagatgtccaactatgacacc
gacctcttccagccttattttgaggccattcagaagggtacgggggctcggtcttacact
ggtaaagtcggggccgatgatgtagacgggatcgacatggcgtaccgtgtcctcgctgac
cacgcccgcaccatcaccatcgccctgtcagatggcggccggcccgacaacacaggaaga
ggctacgtgttgaggaggattcttcgtcgtgcggtccgttattcacatgagaaacttgga
gctaagcgcggtttcttcgcgtctcttgtggacgtcgtggtcgattcactgggcgaggcc
ttccccgagttaaagaaggaccccgacatggtgaaggacatcatcaacgacgaggaggcg
cagttcctcaagaccctcagcagggggcgccgcatcctcgacaggaagatcgtgagcctg
ggagactgcaggaccatcccaggcgacacggcctggctgctgtacgacacgtacggcttc
cctctggacctgacctcgctcatcgctgaggagaagggcctgggggtggacgtggccgcc
ttcgaggaggagaagaaagctgcgcagctgaagtctcagggtaaaggtgccggagacgcc
gaccacatcatgctggacatctacgccatcgaggagctgaggaacaagcaggttcctgcc
acagacgactctcccaaatacagatactcgtcggacgagaacgggaactacgagttccag
cagacctcggccacggtcctggctctgcgccgcgaccgcgccttctgcgacgaggtcacc
acgggtcaggagtgcggcgtgctgcttgaccagacgtcgttctacgccgagcagggagga
cagacgtttgacgagggctacattctgcgcgaggacgacaacacggaggaccggatggag
ttcacggtgaagaacacgcaggtccgtggcggttacgttctccacatcgggaccgtttat
ggagctctgagggttggagaccgagtgactctgcaagtagacgaggcgcgccggcggccc
atcatgagcaaccacacggccacgcacatcctgaacttcgccctgcggggggttctgggg
gaggcggatcagagagggtccctggtcgcccccgatcgtctgcgcttcgacttcacagct
aaaggtgctctgagcacgggcgaggtccgtcggaccgaggagatcgccggcgccctgatc
agagacgcaaagccggtgtacgccatggatgctcctctagcagaggccaaggccatccag
ggtctgcgagccgtgttcgacgagacctaccccgacccggtccgggtggtttccatcggg
atcccggtccaggagctgctggacgaccccaatagtcctgcagggtcccagacctccatc
gagttctgtggtggaacccatctgcagaactcgagtcacgccgcgccgttcgtcatcgtc
tcggaggaggccatcgctaagggcatccgccgcatcgtggccgtgacgggagcagaagcc
cagaaggcccagaggaaagccgacgccctgctccaggctctgtccgctctgggagacaag
gtgaagcagcagacggttccgaacaaagacctgcagaaggagatcgcagacctgaccgag
tcgctgggcaccgccgtgatctctcagtggcagaaggacgagatgagggacaccctgaag
ggtctgaagaagaccatggacgacctggaccgcagctacaaggccgacattcagaagagg
gttttggagaagacgaaagaggtgatcgagaacaaccccaaccagccgctgctcgtcatg
gcgatggagaccggagcctcagcaaaggctctgaacgagtccctgaagctgctgaagtcc
cagtcccctcagaccgccaccatgctgttcaccatcgaccccgaggccggaaagatcacc
tgcctgtgccaagtcccacaggaagtggcgagccgcggcctgaaggccagcgagtgggtc
caggagctgtgtcccctgctggacgggaaaggaggcggtaaggacatgtctgcccaggcc
acgggcaggaacacgctgtgcctgcaggaggcgctgcagatggccaacgagttcgctcgg
ctcaaactgggagaaaactga
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