Nematolebias whitei (Rio pearlfish): 119416190
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Entry
119416190 CDS
T08042
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119416190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119416190
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119416190
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
119416190
NCBI-ProteinID:
XP_037539315
LinkDB
All DBs
Position
10:14330327..14362733
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AA seq
1311 aa
AA seq
DB search
MFNWVVKVVPQPAETPGAAEPVKTEPVKNNEVKTQKKTEVVLENGQNNSGVISWLSNGFV
STLPQPPGSSLLSRTNSDSRPGEDGERSGVINWVTQGLTKVLPQPDEKYRDNNDTKNTAE
EHTEVYEVAAMPEYDPLPHIPVVEVVSEDEGLEEESLTSQFTPRMKNWIKQIIPQPVLPP
GAVPTEPAPKSSRSSIDKILSPPPESLSGISLDTDGKASGVVDWFVSGLGLKMPQLVVPP
KDDAETATEVLQKASSKLNPDMVLEDVESDNEGQQKYEDHIKVSAPSKSLSTHPVAMQQQ
EETQKNIEAQTSESVTKISQEDAETQTGRWTPFIESIKKEAEDVALANMEERLLQERMEM
ARLAEDVARQTAEMAVRQMANEGTSIKLSLESQELLEEPEEELLVTEEEENKMEERNVKE
KEESLSQDEEKVETEEPTIKEPEPEQEEVPKETSPPPPQCLEPEKASEPEPKTQEDSPEA
QPVTQQPQKADGSNTEKTGEKEEEATDDGCGESSSISLRPAVNIEDVDHEKGRAGGEEKS
DISLSLTPQDLKLTTLTVPVTPSGSRQSKGDKDVGRNRRTVWTKIRQLQSQSEDDDEELS
IPVRAWPSQSSLHGSDDIVKERPGSSASQTSAVVNERLQELVRMFKERTEKAKEKLIDPD
SSDEESVITSPLQPPAPQSAPQAAPLDKEEQDMQASDRGGGVDSETEKEVSGCCPKVKSP
RWIRACRHLCFPASIDPFTNLMYVLWMFLVCLAWNWNVWFIPVRWAFPYQTPENIHYWLL
TDYLCDLIYILDISVFQPRLQFVSGGDIVSDKIEMRKNYMKTKRFKFDVASLVPLELFYF
KTGVNPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTTYLLFCLHCNACLYHWAS
TYIGLGATQWVYNGDGNGYIRCFYFAVKTLITIGGLPDPTSLLEIIFQLINYFVGVFAFS
IMIGQMRDVVGAATAAQTYYRTCMDNTIKYMTSYRIPKDVQNRVKTWYNYTWQSQGMLDE
QELLTQLPDKMRLDIAVDVNYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKG
EVGREMYIIKAGEVQVVGGPDERTVFATLRAGSVFGEISLLAVGGVNRRTANVVAHGFAN
LFILDKKDLNEILVHYPESKKLLRKKARKMLNKGKKPEVKEEAKESPQTSAAPLRPETPK
LLRAALEASEKSSRLKGVLAKVREKTNKSSITLQPFTPPSVRPASPALSCDPDRDVDTLS
SVSAGSMNLRSASQCCDPEGPLSMQLRGDSIEDEDVSEDERDEGGKSKEKV
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggttcctcaacctgctgaaactccaggggctgctgaa
ccagtcaagactgagcctgtaaagaacaacgaggtgaagacacagaaaaagacagaagta
gttttggagaatggtcagaacaacagcggagtgatcagctggctgtccaacgggttcgtc
agcaccctgccccagcctcctggatcttctctactcagcaggaccaattcagactccagg
ccaggggaggatggagaaaggtccggagtaatcaactgggtcactcagggtctgaccaaa
gtgctgccccagcctgacgagaagtaccgagataataacgacaccaaaaacacagcagaa
gagcacacagaggtatacgaagtagcagcgatgccagaatatgaccctcttccacacatc
cccgtggtggaggtggtttcagaagacgaggggttagaagaggagagcttgacctctcag
tttacacccaggatgaagaactggatcaagcagataatccctcagccagtgttgccccct
ggtgccgtacccacagaaccggcacccaaatcctcccgttcttccatcgacaaaattctg
tctccaccacctgagtctctcagtggaatctctctggatactgacggcaaagcctctgga
gtggtggactggtttgtgtcaggactgggtttgaagatgcctcaacttgttgttccacct
aaagatgatgctgagactgcaaccgaagtcctgcagaaagcttcatccaaactcaatcca
gacatggtgctggaggacgtggagtcggataatgagggccagcagaaatatgaagaccac
atcaaagtttcagctccgtctaagtctctgagtacacatccagtcgcaatgcagcaacaa
gaagaaacacagaaaaatattgaggcgcaaacatcagagagtgtgacaaagatatctcag
gaagatgctgagacccagacgggtcgctggacgccttttatcgaaagcatcaagaaggag
gctgaagatgtggctttggccaatatggaggaaaggcttcttcaggagcggatggaaatg
gctcgactggctgaagacgtggcccggcagacagcagagatggctgttagacagatggcc
aatgaggggacgtccatcaaactctcactagagagtcaggaacttctggaggagcctgaa
gaagagttactggtgacagaagaagaagaaaacaaaatggaggagaggaatgtcaaagaa
aaggaagaaagtctatctcaggacgaggaaaaagtcgagactgaggagccaactatcaag
gaaccagagccagagcaggaagaagtgccaaaagagacctcccctcctccacctcaatgt
cttgaaccagaaaaagcttcagaacctgaacccaagacccaggaagacagtccagaagct
caaccagtgacccaacagccccagaaagcagacggcagcaacactgagaagactggtgaa
aaagaagaagaggctactgatgacggctgcggtgagagctccagcatcagccttcgccca
gctgtaaacatagaagatgtcgatcatgaaaaagggagagcgggaggcgaggaaaagagt
gacatttctctaagtctcacccctcaggacctcaaacttacaaccctcactgtccccgtg
accccatcaggcagccgtcagagtaaaggagataaagacgtcgggagaaatcgtaggacg
gtctggacaaagatcaggcagctacaatctcaaagtgaagatgatgatgaagagctgagc
atccctgtcagagcctggcccagtcagtccagcctgcatggctcagatgacatcgtcaaa
gagcgtccgggctcctcggccagtcagaccagcgcggtggtcaacgagcgtcttcaggag
ctggtcaggatgttcaaagagaggacggagaaggccaaggagaaactcatcgacccggac
agctcagatgaagagagcgtcatcacctctcctcttcagcctccagctcctcagtctgct
cctcaagctgctccactggataaggaggagcaggatatgcaagcatcagaccgaggagga
ggagtagacagtgagacagagaaggaggtgtctggatgctgccctaaggtgaaaagtcct
cgttggatacgagcctgtaggcacctctgcttccctgccagtatcgaccccttcaccaac
ttgatgtacgtcctgtggatgttcttggtgtgtcttgcctggaactggaatgtatggttc
atcccagttcgctgggccttcccctaccaaaccccagaaaatatccactactggctgttg
accgactacctctgtgatcttatctacatcttggatatctccgtctttcagccacgcctg
cagtttgtcagcggaggtgacatagttagtgacaaaattgaaatgagaaagaactacatg
aaaaccaaacgcttcaagtttgacgtggccagccttgttcccttggagctcttttatttc
aaaactggcgtcaaccctctgcttcgtttaccgaggctgctgaagatcaactccttcttt
gagtttaacgagcgtctggaagccatcttgaccaaagcttacatttacagggtgatccgt
accaccacgtatcttctcttctgtcttcactgcaatgcttgtctctaccactgggcctcc
acctacattggactgggagccacccagtgggtctacaatggggatgggaacgggtacatt
cgatgtttctattttgcggttaaaactctgattacaatcggaggtctgccggaccccacc
tccctgttggagatcatcttccagctcatcaactattttgttggcgtatttgctttctcc
atcatgattggacagatgcgggatgtggtcggcgcagccacagcagctcaaacctactac
cgcacctgcatggacaacacaattaaatacatgacatcctatcgcatccctaaagatgtc
cagaaccgagtcaaaacctggtacaactacacctggcagtcacaaggcatgctggatgag
caggagctgctgactcagctgccggataaaatgcgtctggacatcgctgtggacgtcaac
tactccattgtgagcaaagtccctctttttcagggttgtgacagacagatgatttttgac
atgctcaaaagcctacgttctgttgtctacctgcctggtgattatgtctgcaaaaagggc
gaggtaggtcgggagatgtacatcatcaaagcaggggaggtgcaggtggttggaggacct
gacgagaggacggtgttcgccaccctcagagcaggatcagtttttggagagataagttta
cttgcagttggcggagtcaacaggcgtacagccaatgtggtcgctcatggctttgccaat
ctgttcatcctggacaaaaaagacctgaatgagatccttgtccattaccctgagtctaag
aaactgctgcgcaagaaagccaggaagatgcttaacaaagggaagaagcctgaagttaaa
gaagaggctaaggaatcccctcagacgtcagcagcacctctcagaccagagactcccaaa
ctgctcagagcagcactcgaggcgtccgagaaatcatctagacttaaaggagtgctggct
aaagtcagagagaagaccaacaagtccagtatcacattacagccgttcacacccccctct
gtacgtcctgcatctcctgccctcagctgtgaccctgacagagacgtggacacgctgtcc
tccgtctctgctggctccatgaacttacgctcggcctctcaatgctgcgaccccgaagga
cctctgtccatgcagctgcgcggcgactcgatcgaagacgaggacgtcagtgaggatgag
agggatgagggagggaagagcaaagagaaggtgtga
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