Nematolebias whitei (Rio pearlfish): 119416242
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Entry
119416242 CDS
T08042
Symbol
fgd4a
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4a
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119416242 (fgd4a)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
119416242 (fgd4a)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
FYVE_2
PH_16
IBR
HEF_HK
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
119416242
NCBI-ProteinID:
XP_037539376
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Position
10:21210021..21230206
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AA seq
740 aa
AA seq
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MEDRGGKPGSVTRERIRDKSNKVSDLISRFEENLTENKKDCSPAKHITKTSNYSATQRIF
QKTEACRIQDKPALVTAAAQDAKKPSANGVLVQMEQGKPKKEEEEEEEEEEKSYNCVRTE
TAELVNGDVGNAEQSEDHLPAHTDGTAAENHPRNEDLETKTESVQKIEEGCSDHRETNEQ
KLFNIASELLHTEKAYVARLHLLDQVFCAKLMEEANKGTFPVDVVKNIFSNIVSIHAFHS
QFLLPDLEKRMGEWTSTPRIGDILQKLTPFLKMYAEYVKNFDKAMEVLKQWIDRSPQFKA
IIQEIQSQEICGSLTLQHHMLEPVQRIPRYEMLLKDYLKKLPQDDADHRDAEKSLDIIAT
AATHSNSAIRKSENLKKLMEIYEMLGEEEDIVNPSNEFIKEGQILKLAARNASAMERYLF
LFNNMLLYCVPKFSLGGPKYTVRTRIGIDGLKVQETTNEDYPHTFQVSGKERALELQASS
EQDKASWIKALQETIEIFQQKNESFKNALKDVDHVSEAELGKRAPRWIRDNEVTMCMKCK
ESFNAITRRRHHCRACGYVVCWKCSEYKAQLEYDGYKVNKVCKDCFLILMGKGVTEDKKK
GILEIEASQFADSSIICGFLQYLEKGKTWQKVWCVIPEKEAVVLYLYGAPQDVKALCAIP
LLGYSVEDSSRPTDPPASFQLRQSKFIHNFAAETEELKQRWMKVIREASTGEILARLETN
GSSANTSDSNNTQEAKPDGT
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagaggaggaaaacctgggtctgtgacccgggagagaataagggacaaatca
aacaaagtatcagacctgatcagccgcttcgaggagaacctcacagaaaacaagaaagac
tgctcgcctgcaaaacacatcaccaagacttcgaactacagcgcaactcaacgcatcttc
cagaagacggaggcctgcaggattcaggacaaacccgcccttgtgacggccgcagcgcag
gatgccaagaagccatcagctaatggggtgctagtgcagatggagcagggaaaaccaaag
aaggaagaagaagaagaagaagaggaggaggaaaagagttataactgtgtgaggacagag
actgccgagcttgtaaatggagacgtgggaaatgcagagcagagtgaagatcatttacct
gcacacacagacgggactgctgcagagaaccacccaagaaatgaggaccttgagactaaa
acggaaagcgtgcaaaagattgaagaagggtgctcagatcatagggagacaaatgaacaa
aagctgtttaatattgcaagcgagctcctgcacaccgagaaggcctacgtagcgcgactt
cacctgctggatcaggtattctgtgccaaactaatggaggaggcaaataaaggaacgttc
cctgtggatgtagtgaaaaatatattttccaacatcgtctccatccatgccttccacagc
cagtttctgcttcctgatctggagaaacgcatgggcgaatggacgtctacacctcggatc
ggagacattcttcagaaactcacacccttccttaaaatgtatgctgaatatgtgaagaat
tttgacaaagctatggaggttctgaaacagtggattgatcgctctcctcagtttaaggcc
atcattcaagagatacagagtcaagagatctgtggcagtctgactcttcagcatcacatg
ctggagccggtgcagagaatccctcgatacgagatgctgcttaaagactacctgaagaag
ctgcctcaggacgacgccgatcatagagatgcagaaaaatcattggacattattgccaca
gcagctactcattccaacagtgccattagaaaatctgaaaacctaaagaaactgatggag
atttacgagatgttgggcgaagaggaggacattgttaacccttctaacgagttcatcaaa
gagggacaaatcttgaagttggccgccaggaacgcttctgcaatggagagatacctcttc
ctgttcaacaacatgctgttgtactgcgtgcctaaattcagcctgggagggcctaagtac
accgtgaggacacggatcgggatcgatggcctgaaagtccaggaaacaaccaatgaggac
taccctcataccttccaggtgtcaggcaaggagagggctctggagcttcaggccagctca
gagcaagacaaggccagctggattaaggctctccaggagacaatcgagatcttccagcag
aagaatgagtccttcaagaacgctctgaaggacgtagatcacgtgtcggaagctgagctg
ggaaagcgggcccctcgatggattcgtgacaacgaagtgacgatgtgtatgaaatgtaag
gagtctttcaacgccatcacacggcggagacatcactgcagagcctgtggctacgtggtg
tgctggaagtgctccgagtacaaggcacagctggaatatgacggctacaaagtgaacaaa
gtctgcaaagactgcttcttgatcctgatgggaaaaggagtgactgaggacaagaagaaa
ggcattcttgagattgaggccagtcagttcgcagacagcagcattatctgtggctttctg
cagtacttggagaaaggcaaaacttggcagaaggtttggtgtgtgatccctgagaaggag
gctgtggtgctctacctctacggagccccacaggatgtgaaggccctgtgtgccataccc
ctactgggttactctgtggaagacagctcccgacccacagaccccccagccagcttccaa
cttcgtcagtccaagttcatccacaactttgctgcagagaccgaggagctgaagcagcgc
tggatgaaagtgatccgagaggcgtcgacaggagagatacttgcacgacttgagactaac
ggcagcagtgccaacacgtcggacagcaacaacacacaggaagctaaacctgacggcaca
taa
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