Nematolebias whitei (Rio pearlfish): 119416302
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Entry
119416302 CDS
T08042
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein
KO
K20163
DENN domain-containing protein 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119416302 (dennd4a)
Membrane trafficking [BR:
nwh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119416302 (dennd4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
119416302
NCBI-ProteinID:
XP_037539460
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All DBs
Position
10:complement(28495734..28522530)
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AA seq
1685 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDSSKPLEEDLHFDDTGAKSVKPKAPITDVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNGASLRGPQIFLCYKRGRDKPPLTDLGVLYEWKEKLKPGCHIV
QTTPSGRPANISSSSSQRIYITYRRAPKSQPHTSLAVTDVCVLIPGKGEMPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKANTVAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGAMI
ECWPAHTKHSLPVFSTFVLTGSSGEKVYGAAIQFYESYPEESLSERQRSQLGLPSSDFGP
DGTRNIYNNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHAVPIEKHISHFMQHVPFPSI
QRPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAVTLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGLDSRYFDLYVPP
ADISCVDLDTNTISQKDDKKALTWKILPRRACKHLLNALNKLHQQLTEGGQLNRDDMQMD
HTMTDSELYGGKSLHTLELEIQEAFLRFMAAILRGYRSYLQPITQAPSEKTTDVSSLFDL
QGFVKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDDCVEKLFTGSKTDSE
RPEDARLIELDESHRSEHTVYINPPELPPLPQGEEHPLCYSYSGFPVLRSELLDPLEGPN
PLSTGIASRHSSPASPTAIFRRSKQEIKSAQKMAKTYSSMPQMWSKCLLRHCYGLWFICL
PALVTNCHSKVRALRTAYDVLRKMQDKKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFEM
KKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVILGVLQFKQAGRKQPTPHT
DTQLSDGSDLDTASHGSLDSTNDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSKE
EERLCSRETDASTPREDKGLRQPNTGSRDISSPCRDDLPCVERPNSLDLSGGRGCVRLPV
PLLSSARPNQLGADRLHGVEEEEDTEAERHKRLVEGGVHCTTSTVRTGIEMGFDPLSQMV
TGTGKECDKDIHSSPTASRNLVEEIETYINNSSPLSSRTPSMDLQNPSSPLFRSTSSAHT
SPQSTALARSSTHLSLPVKAKERLRTSPSLPLGMCNKDRERPSSLVWPSSPTPSTSSFSM
DSLLTPTLDIFKSSVISAGKGVAEKASRLYSRLSSQTSLTQDGNSDRMSVSSLTSAEAEC
SSLHDNDSSLDPHGFTSPQHCGVSRVRRSPVGAHRTNLSSPSSPNRVFRHNSFSGGLALP
SKAPHTPDSSPDVSRFQPSPNYTVEVLMSSCSLCKTCDCLVYDEEIMAGWTADDSNLNST
CPFCGTAFLPFLNVEIKDLRPQHRVLKNSNPVKEEDTSAPLSPEDSVSVAPSAASSHEQD
ISWSANMPAPVPDPVTIPYLSPLVLWKELESLLVNEGDQAISSPSVVDQHPIVFWNLVWY
FRRLELPSNLPALILASQHCGHRDQPLQSVSSEDSKQVLVRTMWDNLRLHKDKLQPCYVL
WNAHCANSLIRSGLCEEGQLFTVELLQSFVRSIKKSDVYQPMSQILQLLGPELGFKRQRS
LYRDLLFLTLVALGRTNININAFDREYRLAYDRLTSSQVKLTHNSDRPPGVGVMECRGTF
GEPSL
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaagggcctcgagtagccgactactttgtggttgccggcctcaccgat
tcatccaagcctctggaggaggacctgcacttcgatgacaccggcgccaagtctgttaaa
cccaaagcccccatcaccgacgttgctgtggtgattcgctcccttggtgaggaggtgccc
ccgggcttcacctgcgtggagagcacgccctcaggcctctctgctgagcttaacggagcc
agcctcaggggcccgcagatcttcttgtgctacaagagaggcagggataagcctccactg
acagatctcggagttctgtatgagtggaaggagaaactgaagcctggatgccacatcgtc
cagacaacgccctcaggtcgtcccgccaacatcagcagttcatcgtctcagcgcatctac
atcacgtaccgccgcgctcccaagagccagcctcacacctccctggctgtgaccgatgtc
tgcgtccttattcctggcaagggggagatgccccctcacaccttctgcaaggtggacaag
aacctcaacagcagcatgtgggggtcctcggtctacctttgctataagaagtctcttgct
aaagcaaacacagtcgcatacaaagcaggtttgctgtgtaggtacccagaagaggactat
gagtcattcccactgcccgagtcagtgcccatgttctgcctgcccatgggggccatgatt
gagtgctggccagctcacaccaagcactcactacctgttttttctacatttgtcctgacg
gggtcctctggggaaaaggtgtatggagcagctatccaattttatgagtcttaccctgag
gagagcctgtcggagcgtcagcgctcacagctcggcctgccaagctctgattttggacct
gatgggaccagaaacatttacaacaacaagagtatctgcttactgtcccactggcccttc
ttccagtccttcaggagctttctcactttcctctacagatattccatctctggaccacat
gcagttcccattgaaaagcacatctcccacttcatgcaacacgtcccatttccctccatt
cagagaccacgcatccttgtgcagttgtctccacatgacagtctcatactgagccagcct
gtgtcctccccgctgcctcttagcggtgggagcctctccacattactactgaacctgggc
ccgaagaacgccgtcactctgcttgtcttggccgtcacggagcacaagatcctggttcat
tccttgcgtccagcggtgctcaccagtgttaccgaagcccttgtgtctatgatctttccc
ttccactggccgtgcccgtacatccctctgtgcccgctggccctggcagatgtgctcagt
gcaccgtgtccttttattgtgggtttggactccagatactttgacctttatgtgcctcca
gctgatattagctgtgttgatttggacaccaacaccatctcccagaaagatgacaagaag
gcattaacgtggaaaatcctgccccggagagcctgtaaacatcttctgaatgccctgaat
aagctccaccagcagctcaccgagggtggtcagttaaaccgcgatgatatgcagatggac
cacacaatgactgacagtgagctttacggagggaaaagccttcacacgctggagttggag
atccaggaggcctttctccggttcatggcggccatcctgcgaggctaccgctcctatctg
cagcccatcactcaagctccgtctgagaagacgacagatgtcagctcgctttttgatcta
caaggcttcgtgaagagcagagaccgctcccaccagaggttttactccctcatgaccaag
actcagatgttcagtcggttcatagaggagtgctccttcgttagcgacaaagacgccagc
ctggctttctttgacgactgtgttgaaaagttgtttactggaagcaagactgacagtgaa
cggccagaggacgccaggctgattgagctggacgagtcccaccgcagcgagcacacggtc
tacatcaaccctccagagctgcctcctcttcctcagggagaagaacaccctctgtgctac
agctattctgggttccctgtgctgagatctgagctcctggatccactggaaggaccaaat
cctctgtcaacagggattgcttcacgccacagcagcccagccagccctacagccatcttt
agacgctctaaacaggagattaaatcagctcagaaaatggccaaaacgtattcttctatg
cctcaaatgtggtctaagtgtctgcttcgccactgctacggcttgtggttcatctgcttg
ccggcacttgtcactaactgccactcgaaggtgcgagctctgcgcacagcttatgatgtg
ctgaggaagatgcaagacaagaagctgcaggctccagatgaggtgtgttaccgtgttctg
ctgcagctgtgcggtcagtacagccagccggtcctggctgtcagggtgctgtttgagatg
aagaaggcaggagttcagcccaatgcaataacatacgggtactacaacaaggcggtgttg
gagagcacgtggccctccaccaccagaggaggctactttctgtgggggaaactgaggaac
gtgatcctcggtgtcctccagttcaagcaagcagggaggaagcagccgactccacacaca
gatacgcagctttcagacggcagtgatctcgacacggccagccacggcagcttagacagc
accaatgactctgccgagcgcacctccatcgacaccgacttcactaaaatggactcgagt
gatgacgggttcagtacaggtggacagtcggaccaaggctacgactcgttgtccaaagag
gaggagaggctgtgcagcagagagaccgacgcctcgaccccgagggaagacaaaggcctc
aggcagcccaacactggctccagagacatttccagtccatgtagagatgatcttccttgt
gtggagaggcccaactctctggacctgtctggtggacggggatgtgtgagactccccgtc
cctctcctcagctcagccaggccgaatcagcttggagccgacagactacacggagtggag
gaagaggaggacacggaggctgagagacacaaacgcctcgtggagggcggtgtccactgc
accaccagcactgtaaggacaggtattgagatggggtttgatcccttgtcacagatggtg
acagggacaggaaaggagtgtgataaggacatccacagctcgcccactgccagccgcaac
ctcgttgaggagattgaaacctacataaacaacagcagccccctgagcagccgcacaccc
agcatggacctacagaacccttcgagcccgttgtttcgctcgacctcgtctgctcacacg
tccccacagtccaccgctctggcccgctccagtacacacctctcactccctgtcaaagcc
aaggagaggctcaggacgtcaccgtccctccctctggggatgtgtaacaaagacagggag
aggccttcctccttggtttggccatcgtcgcctaccccctccacctcgtcgttctcgatg
gactcgctgctgaccccaactctggacatcttcaagagcagcgtcatatcagcagggaag
ggtgtggcagagaaggcgagtcgcctctactcccgtctgtcctcccagacttcgttaacg
caggatggaaactctgaccgaatgagcgtttcctccctgacgtcagcagaagctgaatgc
tcctcgctgcacgataacgactccagtctggacccgcatggcttcacgtcccctcagcac
tgcggcgtgtcccgggtcaggagaagccccgtcggcgctcaccgaacaaacctgagcagc
ccgagcagccccaacagagtgttcagacacaactccttctctggtggtttggcacttcct
tccaaagctcctcacactccagattcctctccagatgtcagccgcttccaacccagccct
aattacacagtagaggtgctgatgtccagctgctctctctgtaagacgtgcgactgtctg
gtgtacgatgaggagatcatggcaggctggacagcagatgactccaacctgaacagcacc
tgccctttctgtggaacagcattcctgccgtttctcaacgtggaaatcaaagatctcaga
ccacaacacagggttttgaagaacagtaatcctgttaaagaggaggacacgtctgcccct
ctcagccctgaggacagcgtgtctgtagcaccatctgcagcttcatcgcatgagcaggac
atcagctggagcgccaacatgcctgctccagtccctgatccagtgaccataccctacctg
agccctctggttctgtggaaggagctggagagtctgctggtgaacgagggcgaccaggct
atctcctccccgagcgtcgtcgaccaacaccccatcgtcttctggaacctcgtgtggtac
ttcagaaggttggagcttcccagcaacctgccggctctgatcctggcctcgcagcactgc
ggccacagagaccagcctctgcagagcgtttcatctgaggacagcaagcaggtgcttgtg
aggaccatgtgggacaacctgaggttgcacaaggacaaacttcagccctgctacgtcctg
tggaacgcacactgtgccaactccctgatccgctctgggctgtgtgaagaaggccagctc
ttcaccgtggagctgctgcagagcttcgtgaggagcatcaagaagagtgacgtctatcag
cccatgagccagatcctccagctgctgggacccgagctgggcttcaagagacagaggagc
ctctacagagatttgctgtttctaactctcgtggctttggggaggaccaacatcaatatc
aatgcgtttgaccgtgagtacaggttggcctacgaccgcctcacctccagccaagttaaa
ctgacacacaacagtgaccggcccccgggagtgggagtcatggagtgccgggggactttt
ggagagcccagtttgtga
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integrated database retrieval system