Nematolebias whitei (Rio pearlfish): 119416337
Help
Entry
119416337 CDS
T08042
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119416337 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119416337 (myo5c)
04131 Membrane trafficking [BR:
nwh04131
]
119416337 (myo5c)
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119416337 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119416337 (myo5c)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119416337 (myo5c)
mRNA cycle factors
P-body specific factors
119416337 (myo5c)
Membrane trafficking [BR:
nwh04131
]
Others
Actin-binding proteins
Myosins
119416337 (myo5c)
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119416337 (myo5c)
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119416337 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Myosin_N
nSTAND3
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
119416337
NCBI-ProteinID:
XP_037539495
LinkDB
All DBs
Position
10:complement(30498849..30517295)
Genome browser
AA seq
1742 aa
AA seq
DB search
MTLLELYTKYNRVWIPDAEQVWKSAEITRDFHSGDDVLELLFEDGTDYRYPVDTSQPKLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFSVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEIGFDRKYRIIGANMR
TYLLEKSRVVFQAENERNYHIFYQLCSCADLVEFKNLRLLSADKFRYTCMGGDITIEGVV
DKKDMEETRRTFSLLGLKEDFQSDVFKVLAAILHLGNVEIRSSGDDKSSVPSNDPHLAVF
CDLLGVKAEELVRWLCHRRIVLVAEAVVKPVPKERAVNARDALAKQLYAHLFDCIINRIN
AALQVPGKQHAFMGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLYNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDALYEELVNTMGTSKFLFLRDFFQEKEQNTTN
SKGVKVKPARPSLKPANKQLRTSVGNKFCSSLSLLMETLNATTPHYVRCIKPNDEKRPFE
YDSGRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHEEANLRDKKQTCKNV
LQKLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRAACVTIQKHLRGWSHRRRYLRVR
EAAIIIQQYIRGKRTIRKTVSAVMLKQGWAALVIQRHWRGYRMRQVFQVVRLASITIQAF
TRGWMARKRYKKMMEEHKALVLQKYARAWLARRRFQTMRRLVLNVQLSYRVQQLRKKIDE
QNKENRGLMERLTSLANSNSQTVERLQSLEAQLTKLTTQKASLEEKERKAKEEASLTIAR
LQKEIEALSLEKQNLEKKFDVSIKEAKESFDQIKRNLLDEKENEARLRKIAENNTEIQRQ
DHEKELETLKEEIKRLKEDRVSLQRKMEEGAQVNSELQEQVVQLTKHVKVIPELRRDLNN
MQNQRNSLDRRMKEQSEQAADKVKKIIRQLLGDVVEKEKLLGLAPVNFEKVYDPDDLLAT
FEGLHEAARILESHQRELRESHETQVEGLVLKADLLQNENSKLQNLFQEKINVNEDIHQE
VSRLSSENSVIPELKQQVFELQRHKQELEGFVKEQSRELAEKNTEITNILQTKFTEESSQ
RRLFEERARELEEAKEELQGRIKELEEEKDHLRRQQLMESEVKGKLREETSRLTAENMDF
EEQLDQKDRLIKKLQSQIKCLEISSKAKQNSVSVIPKEYLGMLEYQRDDESRLIQNIILD
LKPKGVAVSMIPTLPAYILFMCVRHADYLNDDRKLKSLMNGMIVAVKKVITAHHKDAEFL
SFWLSNTHQLLNCLKQYSGEDEFLKQSTPRQKKNCLQHFDLSEHRQILSDLAIHVYHQLI
SGMQKTLTPAIVPGMLEHESLQGISSMKPTGFRKRSNSVYNDSESYTISSILQLLSIFHS
TMSHHGMEQCLINQVVKQLFFLVGATTFNHIMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQSSNAIKTLRPLTQAAWLLQVSKSTDEDAKEIAEKCTELSPVQIVKILNSYTPIDDFE
KRVTSSFVRRVQSLLQDHEGSTLLMLDSDYRFQVTFPFCSSSMALESVQVPTSLHLDFLT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atgactttactggaactttacacaaagtataacagagtgtggataccagatgcagagcag
gtgtggaaatcagctgaaattacaagagatttccattctggggacgatgttcttgaacta
ctttttgaagatggcactgactacagataccctgttgacacatctcaacccaaactccct
cctcttcgaaacccagacatcttggtgggcgagaacgacctcacagctctcagctacctg
cacgagcctgcagtcctgcacaatctcaaagtgcgattcgttgaatccagaatcatctat
acgtactgtggtattattctagttgctgtaaatccatacaaacagcttcccatctatgga
gatgcaatcattcatgcctactcaggccagaacatgggggacatggatcctcatatattt
tcagtggcagaggaggcgtacaaacagatggccagaaatcacaagaaccagtctatcatt
gtgagcggagagtctggagctggtaaaacggtgtcagctcgatatgctatgaggtacttt
gctgttgtgagcaaatctggaagtaagactcgagttgaagacaaagtgttggcatctaat
ccaataacagaggccatagggaatgcaaaaaccactcgaaatgacaacagtagccggttt
ggaaaatacacagagatcggctttgataggaagtaccggatcattggagcaaacatgagg
acttacctgctggagaaatccagagttgtttttcaggcagagaatgagcgcaattatcac
atattttaccaactgtgttcatgtgcagacttggtggagttcaagaacctgagactgttg
agcgcagataagttcagatacacttgcatgggcggtgacatcaccatcgaaggtgtagtt
gacaagaaagacatggaagaaactcgacggaccttctcactgctgggtttaaaagaggac
tttcagtcagacgtttttaaagttttagcagcgattctgcatttgggaaacgtggagatc
agaagttcgggagatgataaatcatccgttccttctaacgatcctcacctggcagtcttc
tgtgacttgttaggtgtgaaggcagaagaactggtgcgctggctgtgccaccggcgaatc
gttctggtggcagaggctgttgtcaaaccggtgcccaaagagcgagctgtgaacgccaga
gatgccctggcgaagcagctctacgctcatctgtttgactgcatcatcaacaggatcaac
gctgcgctgcaagttcctggaaaacaacatgcgttcatgggtgtcctggacatttatggg
tttgaaacatttgacatcaacagctttgaacagttttgcatcaactacgcgaatgaaaag
ctccagcagcagtttaacttgcacgttttcaagctggagcaggaggagtacatgaaggag
gacatcccttggacgctgatagatttctacgacaaccagcctgtcatcgacctgatcgaa
gcaaagatggggatcctggacttgcttgatgaagaatgtttattccctcaagggactgat
cagagctggctgcagaaattgtacaactacctggatgccaatcctttgtttgagaagccc
aggttatcaaatgaggcttttgtgattcaacactttgcagacaaggtggaatatcaatgc
agaggttttctcgagaagaaccgagatgctctttacgaagaacttgtgaacacaatgggg
accagtaagtttttgtttctgagagactttttccaagaaaaggagcaaaacaccacaaac
tctaaaggtgtgaaagtgaagccggccaggccttcgttgaaaccagccaataaacagctg
agaacctctgtgggaaacaagttctgcagctccctgtctttactgatggagacgttaaac
gccaccactcctcactatgtgcgctgcattaagcctaacgatgaaaaacgtccgtttgag
tacgactctggtagagtggtgcagcagctgcgagcctgtggggtcctggaaactattcgt
atcagcgcccagagctacccttccaggtggacgtacattgagttttacagtcgatacagt
atcctaatgtcacacgaggaggctaacctcagagacaagaaacaaacctgcaagaatgtg
ctgcagaagttgattcaggactccaaccagtacaagtttggccggacaaagatcttcttc
cgagccggtcaggtagcttatctggagaagctgcgtctggatcgacttcgagcagcctgt
gtgaccattcagaaacacttacgtggatggagccacaggaggaggtacctgagggtgagg
gaggcagccatcatcattcaacagtacatccgagggaagaggacaattcgtaaaacggtg
agcgctgtaatgctgaagcagggctgggcggctctggtgatccaaagacactggagagga
taccgcatgaggcaggtcttccaggtggtccgtctggcctccatcaccatccaagccttc
acaagaggttggatggccagaaaacgctacaagaagatgatggaggaacacaaagcactg
gttttgcagaaatatgccagagcatggttggcacggcgacggtttcaaaccatgcgccgg
ctcgtgcttaatgtccagctttcctacagagttcagcagctccgtaagaagattgacgag
cagaacaaagagaatcgtggactgatggaacgactcacgagcttggccaactctaattct
caaactgtggaaagacttcaaagtctggaggcgcagctgacaaaattaaccactcagaag
gcttctctggaggaaaaagagaggaaagccaaagaagaagctagtctgacaattgctcgg
cttcagaaggaaatagaagcactcagccttgaaaagcagaacttggagaaaaagtttgat
gtgagcatcaaagaggccaaagagagctttgatcaaataaaaaggaacctcctggatgag
aaagaaaatgaagccaggcttagaaagatcgcagagaataacactgagatccagagacag
gaccacgagaaagagctggaaactctgaaggaggagataaagagactaaaggaggacagg
gtgagtctgcagaggaagatggaggagggtgcgcaggtgaactctgagctgcaggagcag
gtcgttcagctcaccaaacacgtcaaggtcattccagagctgcgcagggatctgaacaac
atgcaaaaccagaggaacagcctggaccgaaggatgaaggaacagtcagaacaagcagca
gataaagttaagaagatcataagacaacttcttggtgatgttgttgaaaaggagaaactt
ttggggctcgctcctgtcaactttgagaaggtttatgaccctgatgatttgctggcaacc
ttcgagggcctgcacgaagccgccaggattctggaaagccaccagagggaactcagggag
agccatgagactcaagtggagggcttggtcctaaaagcggacctccttcaaaatgagaac
agcaagctgcagaatctcttccaggaaaaaattaacgtcaatgaagatattcaccaagaa
gtgtcgaggctgagcagtgagaactctgttatacctgagctgaaacagcaggtttttgag
ctgcaaagacataaacaggagctggagggttttgtaaaggagcagagccgagagttagca
gaaaaaaacacagagataaccaacattcttcagacaaagtttacagaagaaagctcacag
cgcagactctttgaagagagagccagagagctggaggaggcgaaggaggagcttcaaggg
aggatcaaggaactggaagaggagaaggatcacttgaggagacagcagctgatggagagt
gaagtcaagggaaaactgagagaggagacttcacgattaactgcagagaacatggacttc
gaagagcagctcgaccagaaagatagactaataaagaaactccagagtcaaataaagtgc
cttgaaatatcatcaaaagcaaaacaaaattcagtgtctgtcattcccaaagaatacctc
ggcatgttggagtaccagagagacgatgagtccaggctcattcaaaatatcatcctggat
ctgaagcccaaaggtgtggcggtcagtatgattcccaccctacctgcgtacatcctgttc
atgtgtgtccgacacgccgattacctgaacgatgacagaaaactcaagtctctcatgaac
gggatgattgttgctgtcaaaaaagtcatcacggctcaccacaaagacgctgagtttttg
tccttttggctgtcgaacacacatcagctgctcaactgtctgaaacaatacagcggggag
gacgagttcctgaaacaaagcacccctcgtcagaaaaagaactgcctgcagcactttgat
ttgtccgaacacagacagattctcagtgacctggccattcacgtctatcaccagctcatc
agtggcatgcagaagactctcacacctgctattgtgcctggtatgttggagcacgagagc
ttacaggggatctccagcatgaagccgacgggcttcaggaagcgctccaacagtgtttat
aacgactctgagagctacaccatctcctccattctgcagctgctctccatcttccactcc
accatgagccaccacggcatggagcagtgcctgatcaaccaagtcgtcaaacagctgttc
ttcctggtgggggccaccaccttcaaccacatcatgctccgcaaagacatgtgctcctgc
aggaaagggatgcagatcaggtgtaacatcagttacctagaagagtggctgaaagagaag
gagcttcaaagctctaacgctataaaaactttgaggccattgactcaggctgcctggctg
ctgcaggtcagcaagtccactgatgaagacgccaaagagatcgctgaaaaatgcaccgag
ctcagccctgttcagattgtcaagattttgaattcctacacacccatagatgattttgag
aaaagagtaacgtcctcatttgtccgcagagttcagtcgttacttcaagaccatgaaggg
tccacactgctgatgttggactcagattatcgtttccaggtcacttttcctttctgctcg
tcttccatggctctggagtcggtgcaggtcccgaccagccttcatctggacttcctgacc
aggatctga
DBGET
integrated database retrieval system
