Nematolebias whitei (Rio pearlfish): 119416341
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Entry
119416341 CDS
T08042
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119416341
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
119416341
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
GAS
Motif
Other DBs
NCBI-GeneID:
119416341
NCBI-ProteinID:
XP_037539500
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Position
10:31199600..31225696
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AA seq
1158 aa
AA seq
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MEKFQSSMRKRLYSLPQNIVQKPAGADGEGDGGKDTGRKSIRLKHLSSLSPASSCRSIEE
ARSEDLDRDVAVRSNLNGDCRFFRSSISSITGPHPPGSDPAEQRRLLPEADAGASESLPG
EHYGPGPLQQQRLMGGLLSVPGQPSVFDQTTFIKLEGTEQIIPEDERLYQAGFMHRQFGA
MLQPGVNKFSLRMLGSERAVEHERERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIII
PVGITFFKDEHTPPWIVFNVVSDTFFLLDLVLNFRTGIVKEDNTEIILDPQQIKIKYLKS
WFVVDFVSSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQ
WEEVFHMTYDLASAMVRIMNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVTRNKMVNDT
WGQQYSYALFKAMSHMLCIGYGLYPPIGMGDVWLTILSMIVGATCFAMFVGHATALIQSL
DSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILEELNEPLREE
IINFNCRKLVASMPLFAHADPNFVTSMLTKLRFEVYQPGDYIIREGTIGSKMYFIQHGVV
SVLTKSNKDTKLTDGSYFGEICLLTRGRRTASVRADNYCRLYSLSVDNFNEVLEEYPMMR
RAFEAVALDRLDRIGKRNSVLQHKVQHHQSSGTLNLHETEIIQRIVQHDRDMAQCTQLIQ
TSTGPTLNLPAAPPSPTPLIWTPLVQAPLQAAAATTPLALALAHHSTLPQILLHNPLAPG
SGSMKEHGSHPKRVQIGASSSCGSGSPPSPAKNRPVAETPSLGFSIPQHLSTGLLSACLP
SQPIFTSSLQPVTPLVAHPPHCGVAPVFPISQTTVSYTCSAQLHSQPFHGAMTSPPLGLL
QQGAPGRLAGRFPAPTIGPLICSSVNPILSQMQQVCPPSCILQTGSTASSDGSLPHFPII
TSSQSSTGPNPPAPVGGAGAAALLAQHTLAGLQSVFLPQVLPEHSALASLAQYGSAEDSP
SYTPPLHSPSTQSPVRGQTVFHGELPPTISSPSSQTHHTSYSRDLFTQEIKTISGSHSCL
HQERPLVMSGSPEGAAGAFSSPMTVSKLYTSIPGQAAPLSRKRTGPEPLDPSGGVHSPLL
RSPAETLEHKQSKLPSNL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggagaaattccagtcttccatgcgcaaacgtctctacagtctgccgcaaaacatcgtg
caaaagcccgcgggggctgacggcgaaggggacggcggcaaggacaccgggaggaaaagt
attcgcctaaaacatttgtcctccttgtctcccgccagcagttgcaggagcatcgaggag
gccaggagcgaggacttggacagggacgtggctgtgaggtccaacttgaacggggactgc
cgctttttcaggagcagcatctcctccatcaccggaccacatcctcccggctcggatccg
gcggagcagcggcgcctcctcccggaggctgacgccggggccagcgagagtttgcccggg
gagcattatggccccgggcccctccagcagcagaggctgatgggagggctgctcagcgtg
ccggggcagccctccgtgttcgaccagacaactttcatcaagttggagggcacggagcag
atcatcccggaggatgagcggctgtaccaggcgggcttcatgcaccggcagttcggggcc
atgctccagccgggagtcaacaagttctccctgcggatgttggggagcgagagggccgtg
gagcacgagagggagcgcgtcaagtctgcgggcttctggataatccacccttacagtgat
tttaggttctattgggacctgactatgctgctgctgatggtgggaaacctcatcatcatc
cccgtgggcatcaccttcttcaaggacgagcacacaccgccctggatcgttttcaacgtt
gtgtcggacaccttcttcctcctggacctggtcctcaacttccgcactggcatcgtcaag
gaggacaacacggagatcatcctggacccacagcagatcaagatcaagtacctgaaaagc
tggttcgtggtggacttcgtctcctccatacccgtggactacatcttcctcatcgtggag
actcgcatcgactctgacttttacaagacggcccgagctctgaggatcgtccgcttcacc
aagatcctgagtctgctgcgtctgctgcgcctctccagactcatccgttacatccaccag
tgggaagaggttttccacatgacgtatgatcttgccagtgccatggtgcggatcatgaac
ctgattggcatgatgctgctgctgtgtcactgggatggctgtctgcagttcctggtgccg
atgctgcaagacttccctcctgactgctgggtcactcgaaacaagatggtgaatgacact
tggggtcagcagtactcttacgctctgttcaaagccatgagtcacatgttgtgcatcggc
tacggcctctacccccccatcggcatgggcgacgtctggctcacaatcctcagcatgatc
gtaggcgcgacctgcttcgccatgtttgtgggacacgccaccgcactcatccagtctctg
gactcttccaggaggcagtaccaagaaaagtacaaacaagtggagcagtacatgtctttc
cacaagctccccgccgacatgcggcagaggatccacgactactacgagcaccgatatcag
gggaagatgtttgacgaggagagcattctggaggagctgaacgagccgttgagagaggaa
attatcaactttaattgccgtaaactggtggcctccatgcccctgtttgcccacgccgac
cccaactttgtaacctccatgctgaccaagctgcggttcgaggtctaccagccgggcgat
tacatcatccgggagggcaccatcggcagtaagatgtatttcatccagcatggcgtcgtc
agcgtgctgaccaagagcaacaaagacaccaagctgacggacggctcttactttggagaa
atctgcctgctgactcgaggcaggaggacagccagcgtgcgggcggataactactgccgg
ctgtactctctgtccgtggacaacttcaacgaggtgctggaggaataccccatgatgagg
agggcgtttgaggctgtggcgcttgaccgcctggatcgcatcgggaagaggaactctgtt
ctccagcataaagtccagcaccaccaaagttcaggcacgctcaaccttcacgagacagag
atcatccaaagaatcgtccagcacgaccgggacatggcccagtgcactcagctgatccaa
accagcaccggtccgacattaaaccttcctgctgctcctccatcacccacccctctcatc
tggacccctctggtccaggccccactccaggccgccgctgccaccacgccgctggctctg
gccttagctcaccactccacactgcctcaaatcctcctccacaatcctctggcaccgggg
tccggttctatgaaggagcacggcagccacccgaagagggtgcagatcggagcctccagc
agctgcgggtctgggtctccacccagccccgccaagaacagacctgtggctgagactccc
tctctggggttctccatcccccagcatctctccacaggacttttgtcagcctgtctcccc
tcacagcccatcttcaccagcagcctgcagcctgtcacccccctggttgctcatcccccc
cactgcggcgtggccccagttttccccatcagccagaccaccgtctcctacacttgctct
gcccagctccactcccagcccttccatggcgctatgacctctccacctctaggtttactt
caacagggggcaccagggaggttagcggggagattcccagcccccaccatcgggcctctg
atctgcagctcagtgaaccccattctgagccagatgcagcaggtctgtcctccctcctgc
atcctgcaaacaggatccacagcgagcagcgatgggagcctcccacattttcccatcatc
accagcagccaatcctctactggacctaaccccccagcgcctgtcggtggagctggagct
gcagcgttgctggcccagcacaccctggcaggactgcagtctgttttcctcccccaggtt
ctccccgagcactcggcacttgcttctctggcccagtacggctcagccgaggactcgccc
agctacacgcctccccttcacagtccaagtacacagagccctgtgagggggcagacagtt
ttccacggtgagctcccccccaccataagctcccccagttctcaaacccatcatacctcg
tactctagagatctttttacccaggaaataaagactatctcaggctctcacagctgtcta
caccaggaaaggcctttggtcatgagtggctccccagagggggcagcgggggccttctcc
tcccccatgactgtcagtaaactctacacctccatcccaggacaagctgctcctttgagt
cggaaacggacaggacccgaacctctggacccgtcgggtggcgttcactctcctcttctt
agatctcctgctgaaacgttggagcacaaacagtccaagcttccctccaacctgtga
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