Nematolebias whitei (Rio pearlfish): 119416373
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Entry
119416373 CDS
T08042
Symbol
caprin1b
Name
(RefSeq) caprin-1b
KO
K18743
caprin-1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119416373 (caprin1b)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
119416373 (caprin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
119416373
NCBI-ProteinID:
XP_037539536
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All DBs
Position
10:complement(31763159..31784088)
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AA seq
683 aa
AA seq
DB search
MPSAMNASRTVQSASPDLGSAPGLAGNFALGGQSDVLKQVLCVLDKKARNMEKKKSKLDD
YKLRKNKGESLNQDQLEALSKYQEVMNNLEFARELQKAYITLGQDIQKAAKKSARREQLQ
REEAEQKKLKTVLELQFVLDRLGDDTVRQDLKQGVGSSPLLTDTDLAAFDEFYKLVGPDR
DQNIRLTDQYEEASVHLRELLEGKDKPVVGTTYKALKETLDQVLLSGYFDRIPSHQNGVC
EEEEEEESVAGAVMAAVAESSEAEEQAVDQETEVIEEFTETITFETTEFVNRQFIPDSSY
SGSEKEQGDEWTRETEAVSALQQQQPVQSATPPVPLETHPVNLTSPVPPSDPLVRKQVVQ
DLMAQMKGPYNFMQDSMLEFDGTPIDPAIVSAQPMKPAQTMDVPQMVCPPGHPDPRPIQP
NSVPSQPEPTQVPIVSPTPPPMYQTSHTPDPRPPTESIDPIQTSMSLSSDQPPPSTALPP
ASQTQVFQPVSKVPHSSGINVNAAPFQSMQTVFNLNAPVPPASETEALNQVGQYQNSYNQ
AFSSQSQHSVEQTKMQPEQLQSVGAFQEQSGGHQQPTQQGPGFGRQAQSFYNSRGMSRGG
ARNTRGMMNGYRGSTNGFRGGYDGYRPAFASTPNSGYGQTQFSTPRDYSNGNYQRDGYQQ
NYKRGASQGARGVSRGSTQAMRS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagcaatgaatgcaagtagaacggtgcaatctgccagcccagacttgggatcc
gctccagggttagcaggcaattttgcactcggtggacagtcagacgtcttgaagcaagtg
ctgtgtgtcctcgacaagaaagctcgcaacatggagaaaaaaaagagcaaactggatgat
tataagctcaggaagaataaaggggaaagtctcaatcaggaccagttggaggccctctcc
aagtaccaagaagtcatgaacaacttggaatttgcccgagagttgcagaaggcgtatatt
actttgggacaagatatccagaaggcggcaaagaagtctgcgcggcgggagcagctgcag
cgagaggaggcagagcagaaaaagcttaagactgttctggagctgcagtttgtcctggat
cggctgggtgatgacacggtacggcaggacctgaagcagggggttggcagctcaccgctg
ctgacagacacagacctcgcagcttttgatgagttctacaagttggtgggaccagaccgt
gatcagaacatcaggttgactgatcagtatgaagaagcgtctgtgcaccttagggagctg
ctggaagggaaggacaagccagtggttggaacaacatacaaggcactgaaagagactttg
gaccaggttctgctgagtgggtactttgaccggattccctctcaccaaaatggagtgtgt
gaggaagaagaggaggaagagtcagtcgcaggagcagttatggcagcagtagctgagtcg
tcggaggcagaggagcaggcagtcgatcaagaaactgaagtaattgaagaatttaccgag
accattacatttgaaacaacagaatttgtaaacagacagttcattccagacagctcttac
agtggcagtgaaaaagagcagggggatgagtggaccagagaaactgaggctgtaagtgcc
ttgcagcaacagcaacctgtacagtctgcaactccccccgttcctttggagactcaccct
gtaaacctaacgtcgcctgttccaccttctgaccctctggtccgaaaacaagtagtgcaa
gacctaatggcgcagatgaagggaccatacaacttcatgcaggactccatgttggagttt
gatggaacgcccattgatccagccattgtatcagcgcagccaatgaaacctgctcagacc
atggacgtaccacagatggtttgtccaccaggtcaccctgatccccggccgatccagccc
aactctgttccttctcaacctgagcccacacaagtccccatcgtttccccaacaccaccc
ccaatgtatcagacctcacacacgccagatcctcgacccccaacagaatccattgatccc
atccagacttccatgtcattgtcgtcagatcagcctcccccttccacagctctccctccc
gcctctcagacgcaggtcttccagcctgtttccaaagttcctcacagcagtggcatcaat
gtcaatgcagctccattccagtcaatgcaaacagtgttcaaccttaatgctccagtccca
ccggccagtgagacggaggccttaaatcaggtcggccagtaccagaacagctacaatcag
gccttcagcagccagtcacagcattctgtagagcagacgaagatgcagccagaacagcta
cagtctgtcggtgccttccaggagcagtctggaggccatcagcagcctactcagcagggc
ccaggttttggcaggcaggcccagtccttttataacagcagaggcatgtctcgcggcgga
gcccgaaacacccggggcatgatgaacggctacagaggctccaccaatggattcagaggt
ggttatgatggttatcgccctgctttcgccagcactcccaactccggatatggacagacc
cagttcagcacacctcgtgactactcaaatggaaattatcaaagggacggttaccaacag
aactacaagcgaggagccagccagggagccagaggagtctcgagaggaagcactcaagca
atgcgatcctga
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