Nematolebias whitei (Rio pearlfish): 119416383
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Entry
119416383 CDS
T08042
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119416383 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwh03021
]
119416383 (taf3)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119416383 (taf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_NSD
PHD_UBR7-like
zf-HC5HC2H
Cellulose_synt
Motif
Other DBs
NCBI-GeneID:
119416383
NCBI-ProteinID:
XP_037539545
LinkDB
All DBs
Position
10:33564234..33575623
Genome browser
AA seq
938 aa
AA seq
DB search
MCESYARSLLRVSVAQICQALGWDAVQLTASDLLSDVLHRYIQQLARVCHRYSELYGRTD
PVLDDVSQAFRLMGVNLSELEDYVHNLEPVAFTHQTPLFPVSKNNVLQFPQLGLRDVEER
KDYIPDYMPPLVSLQEEEEEEEVPPDMGTSAEAMQVALEEEEEEVDEDETVNDENHPLKR
HLDSPDAALGMMPTSKRPRLYPGLSPEWGVEPREPLTSLNPQRVPPGILPSHDSLDPLSP
EMPSIPLPSFRPQPIIPKLPDQKGLLTPVRKPKVSSPGRQRTKSPKGVIPVPAVSSPIHS
PKPSKERKKSPGKMKSPKSPKSPKMSLAKTPQPQSKADVLHKFPLSALSERMGKENIHMR
LGLEDRELFKGPFEKPEPENKAIDDSIDAVIAKACAEREPDPFAFSSGSDSDSNGFSSPR
RLTILEPSTPKAPLGVGNLFKDTSTPLHLHLHPHLGLGNWTMDDSINEVVRKANQVGPPA
PPQSQATYVSSGSASPPTPEPLLKVFEEKIKMVSPLDVKKKLKKELKTKMKKKDKEKAKD
KDREKDKSKLKEKNKDKNRDKSKESSKDVKMPWKEFGLKDEELFAQHDFILPEGSIKIKS
RDGDGPKKEKEKHKDKKKDKEKSKKDKDKKDKGKDRNKEDKQKPSVMPPFGLSEIPPLFS
PSTCHRVPSMLPPLAPILHEKEGKSKDKEKKKEKKEKKKKKDKDKERDKAKEKEREKEEK
RKEKEMEKEKREKDKEKERIRLEKIKLETAAALPSPVIPRLTLRVGAGQDKIVISKVVPN
SESRTPGPRTPATKSAPGIRPRTPLPPPILAPVAPSLPLPASPLPPAPPPALSLLPPPPM
LPPAVSTKTPVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGSPMIGCEGEGCDDWYH
WPCVGILTPPPEDQQWFCVKCSGKKKDKKHKKKKHKPH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagagctatgcccgctcgctgctgcgtgtgtcggtggcgcagatctgccaggct
ctgggctgggatgcggttcagctcacagcgagcgatctgctgtccgatgtgctgcacagg
tacatccagcagctggccagggtttgccaccggtactctgagctgtacggaagaacagat
ccagtgctggatgatgtcagccaggccttcaggttgatgggggtcaatctgagcgagctt
gaggactacgtccacaacctggagccggtggccttcactcatcagacgcctctgtttcct
gtcagcaagaacaatgttctgcagtttcctcagctgggactgagagatgtagaggaacga
aaggattatattccagattacatgccacccctggtctccctgcaggaagaagaagaggag
gaagaggttcctccagacatgggcacttcagctgaagcgatgcaggtggctttggaggag
gaagaggaggaagtagatgaagacgagactgtcaatgatgaaaatcatccactaaagaga
cacttggacagtcccgatgcagctttgggcatgatgcccacctccaagaggccacgcctg
taccccggcctcagcccagaatggggcgtggagcccagggagcccctcacatcccttaac
ccacagcgtgttcctcctggcatccttccctctcatgacagcctcgaccccctgtcacct
gaaatgccatcgataccccttccttcgttcagacctcagccgataatacccaaactccct
gatcagaagggtctcctcactcctgtaagaaagccgaaggtttcctcccctggcagacaa
cggactaagtccccaaaaggggtcattccagttccagcagtcagcagtcccattcattct
ccaaagccgtctaaggaaaggaagaagtctccaggcaagatgaagagtcctaaaagcccc
aagagcccaaagatgagtttagctaaaacaccccaacctcagagcaaagcagatgttttg
cacaagttcccactgtctgcgctgagcgagaggatgggcaaagaaaacattcacatgcgt
ctgggtctggaggaccgggagttgttcaaaggcccgtttgaaaagcccgagcctgaaaac
aaggccatcgatgactctattgatgccgtgatagcgaaggcgtgcgccgagagggaacct
gatccgtttgctttctcctctggctctgactcggacagcaatgggttctccagccccagg
aggctgaccatattggagccgtctacacccaaagctcccttaggagtgggcaacttgttt
aaagacacatctacacctcttcatcttcatcttcatccgcacctgggcctcggcaattgg
acgatggatgattcaattaacgaggtggtccggaaggccaaccaggtgggtccgcccgca
ccccctcagagtcaagccacctacgtatcgtcgggatcagcctcgcctccgactccggag
cccctgctgaaggtgtttgaggagaagatcaagatggtgtcaccgttagacgtgaagaag
aagctgaaaaaggagctgaaaactaaaatgaagaagaaggacaaagaaaaagcaaaagac
aaagatcgggagaaggataagagcaagctgaaagagaagaacaaggataagaacagggac
aaaagcaaagagtcttccaaggatgtcaagatgccctggaaggagtttggcctgaaggac
gaagagctctttgctcagcatgactttattctgccggagggctccatcaaaatcaaatca
agagatggagacggcccaaagaaggagaaggagaaacacaaagacaaaaagaaggataaa
gaaaagagtaaaaaggacaaagataagaaggacaagggtaaagacaggaacaaggaggac
aaacagaaaccgtctgtgatgcctccgtttggtctgagtgaaatcccgccgctcttcagc
ccttcgacctgccaccgtgtgccctccatgctgccgccgctggcacccatcctccacgag
aaggagggcaagagcaaggacaaggagaagaagaaggaaaagaaggagaagaagaaaaag
aaagacaaggacaaggagcgagataaggctaaagaaaaggagagggagaaggaagagaag
aggaaagagaaagagatggaaaaggaaaaacgagagaaagacaaagaaaaagagcggatt
cgattggaaaagatcaaactggaaactgcagctgccttaccatctccagtcatccccagg
ctgaccctcagggtgggggccggccaggacaaaatagttatcagcaaggtggttccgaac
tccgagtccaggactcctggacccaggactcctgctaccaagtcggctcctgggatccgt
cctcggacccccctgcctccgccgattctcgctccggtcgctccgtctctgcctcttcct
gcctccccgctcccacctgctcctcccccagcattgtcactgctcccccctccccccatg
ctgcctcctgccgtctccaccaagacgccggtccgcagcgtcgtcactgagaccgtcagc
acttacgtgattcgagatgaatggggaaaccaaatctggatttgtcccggatgcaacaaa
cccgacgacggcagtcccatgattgggtgtgagggcgaaggctgcgacgactggtatcac
tggccttgtgttggaattctgactccgcctcctgaggaccagcagtggttctgcgtgaaa
tgttccggcaagaagaaggacaaaaaacacaagaagaagaaacacaaaccacactga
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