Nematolebias whitei (Rio pearlfish): 119416445
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Entry
119416445 CDS
T08042
Symbol
tbc1d2b
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 2B
KO
K20166
TBC1 domain family member 2B
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119416445 (tbc1d2b)
Membrane trafficking [BR:
nwh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119416445 (tbc1d2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_8
XLF_CC
USP8_interact
Motif
Other DBs
NCBI-GeneID:
119416445
NCBI-ProteinID:
XP_037539607
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All DBs
Position
10:28013979..28034338
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AA seq
951 aa
AA seq
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MHEEEDGGDSNSCSAPRLPTFKSVDVADLDCGKEQASKLCGYLNKLSGKGPLRGYKLRWF
VYDPRKCYLYYFKTPQDALPLGHIDIGDACFMYDVEGDEGQFEVRTDGKEFLLKAPNRQV
MLYWLQQLQQKRWEYSSTRGGGQRDSWSSPTLVYPPTGLVGKDIDSVINENQSENLEKVR
SDFAMETELNPGGMVGIQSARGPSAANANPINFSLKNFGTELRNTMSSLRPGRAGENRRS
VFYTNNSSSEEWEMINPPPKDFPEQKTLLSSHRHSFGSAFTFDFVRTSSRPKRSSLRDVK
GTGRFGRSSENSAAECNGSKPSDLQLRLQSQQEELSQMQQEQVQLREKLASQKELVRLLQ
QTLRTSQCDGPAVQRPAPRTSSPSDQSQASAVTQEHVARLEALLQERDVQIPSLCGHMER
LSLEKESLQKELKGLKIKVGEMNDQLGMLMETIQAKDEVIMKLSQQSSEQSGNPNDAGSP
APHMEQQELDVLKDSLQGYKSQNKFLNKEILELTVLRRNAESREKALEAKCTALEAKLCQ
VESKYLVLLQEVRAPVCSSSEQSPAREVISRLLEDALQAESSDQQEHAIFKPNTVSEYDV
YGFKTLPEEEEEEERLVAKVRALELKSLSMTDQEVSVGVKWENFLASTMNRDLVRSPELK
TLIRCGVPHEHRSLVWRWCVSFHVKKFREHLAPDYYETLLNVARERPNPASKQIELDLLR
TLPNNKHYASPSAGGIHKLRNVLLAFSWRNPDIGYCQGLNRLAAIALLYLDQEDVFWTLV
AIVEVFMPRDYYTKTLLGSQVDQRVFKDLMSEKLPRLHAHFEQHKVDFSLITFNWFLVVF
VDSVVSDILFKIWDAFLFEGPKIIFRFALALFKYKEEDFLKLQDSTAIFKYLRCFTRTIL
DSRXNMNILFISQKPTRDVFASTPRFRIDPFRSHTKTAQMEVSYDKALCVQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagaggaggatggcggagactcaaactcctgctctgccccgcgcctgcccacc
ttcaagtccgtggacgtggccgacctagactgcgggaaggagcaggcctccaagctgtgc
ggctacttaaacaagctgtccggcaaggggcctctcagggggtacaagctgcgctggttc
gtgtacgatccgaggaaatgctacttgtattacttcaagactccccaggacgccctgccc
ctcggacacatcgatatcggcgatgcgtgcttcatgtacgacgtggagggggacgagggc
cagtttgaggtccgcacagacggcaaggagttcctcctgaaggcccccaacaggcaggtg
atgctctactggctgcagcagttgcagcagaaacgctgggagtacagcagcacacgaggc
ggcggtcagagagacagctggagctccccgacgctggtttaccctcccaccggcctcgtg
ggtaaagatatcgattcagtcatcaatgagaaccaaagtgaaaacctggagaaggtccgg
agcgacttcgccatggagacggagttaaatcctggtgggatggtggggatccagtctgcc
agagggccgtctgctgcgaatgcgaaccccatcaacttttcgctgaaaaactttggcacc
gagctcagaaacaccatgtcgtctctgcggcccggcagagcgggcgagaacagacgcagt
gtgttttacaccaacaacagcagctcagaggagtgggagatgatcaatcctccacccaag
gacttccctgaacagaagactctcctcagctcacacagacattccttcggatcggcgttc
actttcgattttgtgcgcacctcctcacggcccaagaggtcctcgcttcgagacgtgaag
ggaacggggaggtttgggcgcagttctgagaactctgcggcggagtgtaacggcagcaag
ccttcggacctgcagcttcgactgcagagccaacaagaagaactgagccagatgcagcag
gagcaagtccagctgcgagagaagctggccagccagaaggaactggtgaggcttctgcaa
cagactctaagaacctcccagtgtgacggacccgctgtgcagcgaccagctccacgcaca
tcctccccctcggaccagagtcaggcttcagctgtaacccaggagcatgtggctcggctg
gaggcgctgcttcaggagagagacgtgcagattccgtccctgtgtggccacatggagcgt
ctgtccctggagaaggagagcctgcagaaggagctgaagggcctgaaaatcaaggtgggg
gaaatgaacgaccaactgggaatgctgatggagaccatccaggctaaggacgaagtcatc
atgaagttgtcgcagcagagctctgagcagagcggaaatccaaatgatgcaggatcacca
gctccacacatggagcagcaggagctggacgtcctcaaggacagtcttcaaggatacaaa
tcccagaacaaattcctgaacaaagagatcctggagctgacggtgctgaggcgaaacgca
gagagcagagaaaaggctttagaggcaaagtgcaccgctctggaggccaagctgtgtcag
gtggagagtaagtacctggtgctgcttcaggaggtccgggcccccgtgtgttcgtcgtcg
gagcagagccctgctcgggaagtcatttccagattactggaggacgcgctgcaggcagag
agctcggaccagcaggagcacgcaatcttcaaaccaaacactgtcagcgagtacgacgtg
tacggcttcaagacgctccccgaggaggaggaagaggaggagaggctggttgcgaaggtc
agagccttggagctgaagtccctgtccatgacggatcaggaggtgtccgttggggtcaag
tgggagaactttctggccagcaccatgaacagagacctggtgcgctcccccgagctcaag
accctgattcgctgcggcgtgccccacgagcaccgctccctcgtgtggcgctggtgcgtc
tccttccacgtcaagaagttccgggaacacttggcgccggactattacgagaccttgctg
aacgtggcccgggagaggcccaacccggcgtcgaagcagatcgagctggacttgctgcgc
actttgcccaacaacaagcattacgcctcgccgagcgcgggcggcatccacaagctcagg
aacgtcctgctggccttttcctggaggaatccagacatcggctactgtcagggactgaac
aggcttgcagctatcgccttgctctacttggaccaagaagatgtcttttggacccttgtg
gccatagtggaggttttcatgcctagagactattacacaaagacgctgcttggctctcag
gtcgaccagcgtgtgtttaaggacctaatgagcgagaagctgccgcgccttcatgctcac
ttcgagcagcacaaagtggacttctccctcatcaccttcaactggttcctggtggtgttt
gtggacagcgtggtgagcgacatcctctttaagatctgggacgcctttctgtttgaagga
ccgaagatcatatttagatttgctctcgctctgttcaagtacaaagaagaagattttttg
aagttgcaggattccacagccatcttcaaatatcttcgatgtttcacacgcacgatcctg
gattcaaggtgaaatatgaatattttgtttatatcacaaaaacccaccagggatgtgttt
gcttcgacaccccgtttccgcatcgatccattcagaagtcataccaagacagctcagatg
gaggtgtcttatgacaaagccttatgtgtacagtga
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