Nematolebias whitei (Rio pearlfish): 119416657
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Entry
119416657 CDS
T08042
Name
(RefSeq) cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119416657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119416657
Cell adhesion molecules [BR:
nwh04515
]
Cadherins
Major cadherins
119416657
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
119416657
NCBI-ProteinID:
XP_037539771
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Position
11:complement(19534381..19924834)
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AA seq
552 aa
AA seq
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MRTDLAVVLTASLLLHTFWRNNAEHASKGPCRPGFSQSFYSVLVSRDVLQGQGIVKGTTV
TTQKVKFDDCVGNDGVVFQSSDPAFSVRTDGSIFAQKEVASLIEPVQFKVAARGQHAKVW
ETVIQLAVIDLPSPGRNENEVTEEEKKQKETEAFQAPPPVIMFSGSRFNSTKGHRRQKRD
WVIPPINVAENSRGPFPQMLVSIRSDQDQDISIRYSITGVGADQPPNEVFSIDPEVGKMF
VTKPLDREHRSSYHSVAVGLFSLCLECGNVMAMILFLTLHYAWDQAPPPAETIPPPALRG
RDFTLYSKLNDPADWLSINRTSGQIVTTAMLDRESVYIKNNIYEATFLATDNGSPAASGT
GTLQIYLIDINDNPPALVPRESQICERMNKNVNGVNITAADADIDPNAGPFVFELPNFPS
SIRRNWTISRISGEEVSQKQPLTEIKRFKSCSFELDYIISLMPDSLKALNPEQEKADIES
DMWSGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSTGDQDYDYLNDWGPRFK
KLADMYGGGDDD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgacttggctgtggttctgacagcatctcttcttcttcacacattctggagg
aataatgcggagcatgcctccaaaggtccctgtcggcctggcttctcacaaagcttctac
tctgtgctggtttccagggatgtactgcaaggccagggcatagttaaaggtaccacagtg
acaacacaaaaagtgaagtttgatgactgcgtggggaacgatggcgtggttttccagagt
agtgaccctgccttcagcgtgcggacggatggatccatctttgcccagaaagaggttgcc
agcctgattgaaccggtccagtttaaagtagcagcacgtggccaacatgcaaaagtctgg
gagaccgtgattcaactggcagtgattgacttgccatcacctgggcgtaatgagaacgag
gtcacagaagaggagaagaagcaaaaggagacggaggcgtttcaagcgccgcctcctgtc
atcatgttctcaggatcccgcttcaacagcaccaagggtcatcgaaggcagaagagggac
tgggtgatcccaccgatcaatgtggcggaaaattcccgaggcccgttccctcagatgctt
gtcagcattcgttcagaccaggaccaggacatctcaatccggtacagcatcactggggtg
ggcgcggaccaaccacccaatgaggtgttcagcatcgacccagaggtcgggaagatgttt
gtcaccaagcctctggatcgtgagcatcgatcttcttatcattcagtggctgtgggcctg
ttcagcttgtgtcttgagtgtgggaatgtcatggccatgatccttttcctcacactgcac
tatgcctgggatcaagccccaccacctgctgagacaatcccacctcctgcactgcggggg
agagattttaccttgtattcaaagttgaacgaccctgctgactggttgtccatcaacaga
accagtggtcagattgtgaccacagcaatgctcgaccgagagtccgtctacattaaaaac
aatatttatgaagcaacatttctggctacagacaatggctctcctgcagccagcggcaca
ggcacgctgcagatctacttgatagatattaatgacaaccccccagcgctcgtacccagg
gagtctcagatttgtgaaaggatgaacaagaacgtcaacggtgtcaacatcaccgctgca
gatgctgacatagatcccaacgctggaccttttgtcttcgagctgcccaacttccccagc
agcatccgacgcaactggacgatttcacggatcagcggtgaggaggtgtcacaaaaacaa
ccattaaccgaaataaaacgttttaaatcgtgctcttttgagttagattatatcatatcc
ttaatgccagatagcctcaaggccctcaaccctgaacaggagaaagcggatattgagagt
gatatgtggagtggtctgcgagctgcggacaacgaccccacagctcctccgtatgactcc
ctgctggtttttgactatgagggcagtggctccaccgccggctctgtcagctctctcaac
tccacgagcacgggggaccaggactatgactacctcaatgactggggcccacgcttcaag
aagctggctgacatgtacgggggaggggatgatgattaa
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