Nematolebias whitei (Rio pearlfish): 119416762
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Entry
119416762 CDS
T08042
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b
KO
K13091
RNA-binding protein 23/39
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119416762 (rbm39b)
Spliceosome [BR:
nwh03041
]
Common components
Common spliceosomal components
General mRNP proteins
119416762 (rbm39b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
119416762
NCBI-ProteinID:
XP_037539874
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All DBs
Position
11:complement(17010791..17016148)
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AA seq
497 aa
AA seq
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MADDFDVEAMLEAPYRKDENKSSHANGHDEHSKKKRRSRSRSPGSKKKKSRSRSRDRKKN
KKRSKSREKKRSRSKERHRSRSRSKERSGRYKARKSPIRKRSRSRSPFKKEKSPVRQPID
NLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVE
SSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGCAGPMRLYVGSLHFNITE
EMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKV
GHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTG
SISFGGMATPSVPTPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPNWANEIQDDVIDE
CNKHGGVVHIYVDKNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHN
LFPDSVTAKLLLMPMRR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgacgttgaggccatgctggaagctccatacagaaaggatgagaac
aagtcctctcatgcaaatggacacgatgaacacagcaagaagaaaaggaggagcaggagt
cggagtccaggctcaaagaagaagaaaagcaggagtaggagccgagacaggaagaagaat
aagaagaggagcaagagccgagagaaaaaacgcagccgcagcaaagagcgccatcgtagc
cgctcccgaagcaaggagcgatccggacgctacaaagcacgcaagagcccaattcgtaaa
cgttccagaagtcgaagcccttttaaaaaggagaagagtcccgttaggcaacccatcgac
aatctaacaccagaggagcgggatgcccgcaccgttttctgtatgcaacttgctgcaaga
atcagagctcgagacctggaggatttcttctcagcagttggaaaagttcgggatgtgcga
atcatctctgacagaaactctcggaggtcaaagggcattgcatacattgagtttgtagag
tcgtcttctgtcccactggccatcggactaactggtcagaggcttttaggcgtgcccatc
atcgtccaggcctctcaggcagagaaaaaccgagctgcagctgcggccaacaatctacag
aaaggctgtgctggtcccatgcggctgtacgtgggctcgctgcacttcaacattactgag
gaaatgctgcgagggatctttgagccgtttggaaagattgaagggatccagctcatgatg
gacagcgagactgggagatccaaaggttacggctttatatcatttgcagatgcagaatgt
gcaaagaaggcactggagcagctgaacggctttgagctggccggacgtcctatgaaggtg
gggcacgttacagagcgctcggactcgtcaacagctagctcgtttctggacaacgatgaa
ctggagagaactggtatcgacctcggcacaacggggcgcctgcagcttatggctcgacta
gcagaaggaactggcttgaagatccctcctgctgctcagcaggctctacagatgaccggg
tccatttcctttgggggcatggctactccatcagttccaaccccagctccaagccaagct
ttgaacctcccatcacagccactggccacacactgccttcagctgtccaacctcttcaac
ccacaagcagaaaatgatcctaactgggctaatgaaattcaggatgatgtgatagatgag
tgcaacaagcatggaggagttgttcacatctatgttgacaagaactctcctcagggtaac
gtgtacgtgaagtgtccctcaataccggctgcaatggcaactgtaaacgcccttcatgga
cgttggtttgcaggtaaaatgataacggctgcatatgttcctttaccgacctaccacaac
cttttccctgactcggtaacggccaagctgcttctaatgcccatgcgtcgatag
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