Nematolebias whitei (Rio pearlfish): 119416887 Help Entry 119416887         CDS       T08042                                  Symbol prpf6 Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism nwh  Nematolebias whitei (Rio pearlfish) Pathway nwh03040   Spliceosome Brite KEGG Orthology (KO) [BR:nwh00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     119416887 (prpf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:nwh03041]     119416887 (prpf6) Spliceosome [BR:nwh03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     119416887 (prpf6)  Complex C    U5 SnRNP specific factors     119416887 (prpf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRP1_N TPR_14 TPR_19 HAT_PRP39_N Suf HAT_PRP39_C TPR_16 HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N TPR_2 TPR_17 FAT ARM_TT21_2nd ARM_TT21_C T7SS_EccA1_N ARM_TT21_5th TPR_21 Mt_ATP-synt_B Motif Other DBs NCBI-GeneID:  119416887 NCBI-ProteinID:  XP_037540008 LinkDB All DBs Position 11:26784986..26797257 Genome browser AA seq 969 aa AA seqDB search MATAAAKQGSKIVSKAGAGGTGTAGAGGGPPVIPLASPLMGKKKKPFLGMPAPLGYVPGL GRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKSQEEDDEDLNDTNYDEFNG YAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERRELREKEEIEKYRMERPKIQQQFS DLKRKLAEVSEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFSKHLQTGENHTSVDPL QGLGGLNTPYPGSMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSVSGQTVVDPKG YLTDLNSMIPTYGGDISDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI MKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIRAKKRV LKKALENVSKSVRLWKTAVELEDPEDARIMLSRAVECCPTSVELWLALARLETYENARRV LNKARENIPTDRHIWITAAKLEEANGNTQMVDKIIDRAITSLRANGVEINREQWIQDAEE CDKAGSVATCQAVIRAVIGIGIDEEDRKHTWMEDADSCVAHGALECSRAIYAHALQVFPS KKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILA LAFQANPNSEEIWLAAIKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIE AAQDLCTEALKHYEDFPKLWMMRGQIEEQCENMDRAREGYNQGLKKCPHSVPLWLLLSHL EERVGQLTRARAILEKARLKNPQCPELWLESVRLEFRAGLKNISNTLMAKALQECPNSGI LWAEAVLLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFLRTVKIEP DLGDAWALFYKFELQHGTEEQQEEVRKRCENAEPRHGELWCAESKHVLNWQKKTGEILVQ VASKIKNTF NT seq 2910 nt NT seq  +upstreamnt  +downstreamnt atggctaccgctgcagcaaaacaagggtctaaaattgtgtccaaagcaggtgcgggaggc accggtacggcgggggccggtggcgggcccccggtaattcctcttgcctctccgctaatg gggaaaaagaagaagccgtttctggggatgcccgctccgctgggttacgttcctggtctg ggcagaggagccactggtttcaccacacggtctgatatcggtcctgctcgtgatgccaat gatcctgtggatgatcgacatgcacccccgggaaaacggaccgttggggaccaaatgaaa aagagccaggaggaagatgacgaagatctgaacgacaccaactatgacgagtttaatggt tatgcaggtagcttgttctccagcgggccttatgaaaaagatgatgaagaagcagatgcg atatatgcagctctggataaaaggatggatgaaagacgcaaagaaagaagggagctgaga gaaaaggaagaaattgaaaagtatcgtatggagcgacccaaaatccagcagcaattctca gacctaaagaggaaattggcagaagtgtctgaggaggagtggctgagcatccccgaagtt ggagatgccaggaacaagcggcaaaggaatccccgttatgagaagctcactcctgtccct gacagcttcttctctaagcacctgcagactggggaaaaccacacctctgttgatccttta caagggttgggtggcctgaacacaccatacccaggcagtatgacccctggtctgatgact cctgggacaggagaattggacatgaggaagattggtcaagccagaaacaccctgatggat atgaggctcagtcaggtttctgactcagtcagtggacagacagtagtggatcccaagggt tacctgacagatctcaactccatgatccccacttatggaggagacattagtgacatcaag aaagctcgtctgctgctgaaatcagtgagagagactaatcctcatcacccacctgcctgg attgcttctgccaggctggaagaagtaacaggcaaactgcaggtggccaggaacctgatc atgaaaggcacagagatgtgtcctaagagtgaggatgtttggctggaggcagctaggctc cagcctggtgacacagctaaagctgtggtggctcaggctgttcgtcacctcccacagtct gtccgcatctacatcagggctgcagagctggagacagacatcagagctaagaaacgagtc ctcaaaaaggccttggagaatgtatcaaagtctgttcgactgtggaaaactgctgttgag ctggaggacccggaggatgccaggatcatgctcagcagagctgtggagtgctgtcctacc agtgtggagctatggttggcgttagcccgtcttgaaacatacgagaatgcccgccgtgtc ttgaataaagctcgagagaacatccccactgaccgccacatctggatcacagctgctaag ttggaggaggccaacggcaacactcagatggtagacaagatcattgacagagccatcact tctctgcgagccaacggtgtggagatcaaccgagagcagtggatacaggacgcagaagag tgtgacaaagcaggcagtgtggctacttgccaagcggtcataagggctgtcataggaatt gggattgatgaggaggaccgtaaacacacctggatggaggatgcagatagctgtgtggct catggagcgctggagtgttccagggccatctatgctcatgccctgcaggtgtttcccagt aagaaaagtgtctggcttagagcagcctactttgagaagaaccatggcaccagagagtct ttggaggctctgctgcagagagctgtggctcactgtcccaaagcagaggtcctgtggttg atgggggccaagtccaagtggctggctggagatgtgccagcagctaggagtatccttgct cttgcctttcaggctaaccccaacagtgaagaaatctggctggctgctatcaaactggag tctgaaaataatgagtatgaaagagctcgtcgactgctggccaaggctcgcagcagtgca cccacagcccgggtattcatgaagtcggtgaagttggagtgggtgttggggaacatcgaa gctgcccaggacttgtgcaccgaggctctgaaacactacgaggacttccccaagctttgg atgatgcgagggcaaatcgaggagcagtgtgaaaacatggaccgagccagagagggttat aaccaagggttgaaaaagtgcccccactcagtgcccctgtggctgctgctgtctcatctt gaagaaagggttggacagctgaccagggccagagccattctggagaaggctcggctcaag aacccgcagtgccccgagctgtggttggagtctgtcagactggagtttcgggccggactg aaaaacatttccaacacactgatggccaaagctctgcaggagtgcccaaattcaggcatc ctgtgggctgaggccgtgctcttggaggccagacctcagaggaagaccaagagcgttgac gctttgaagaaatgtgaacacgatcctcacgttctgctcgctgtagcgaagttgttctgg agtgaacgtaagatcaccaaagcccgggagtggttcctcaggactgtcaagattgagcca gacctgggagatgcttgggctctcttctacaagtttgagctgcagcatggcacagaggaa cagcaggaagaggtgcggaagcgatgtgagaatgcagagccccgtcacggagagctgtgg tgtgccgagtccaaacatgtcctgaactggcagaagaaaacaggagagatattagtgcag gtagccagcaagatcaagaacactttctaa

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