Nematolebias whitei (Rio pearlfish): 119416897
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Entry
119416897 CDS
T08042
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119416897 (dhx35)
Enzymes [BR:
nwh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119416897 (dhx35)
Spliceosome [BR:
nwh03041
]
Complex C
Other components
Complex C specific factors
119416897 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
AAA_19
nSTAND3
AAA_7
Motif
Other DBs
NCBI-GeneID:
119416897
NCBI-ProteinID:
XP_037540018
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All DBs
Position
11:complement(27574009..27581940)
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AA seq
699 aa
AA seq
DB search
MAAPLSTMRFWKPGSEAPGISEERELNSETTGSPIIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESYQTVIIVGETGCGKTTQIPQYLLEAGWAVEGKVIGVTQPRRVAAISVANRVAE
ERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRVIVASATLDAKKFHEFFNLNESGDLNNDTSAILTVEGRT
FPVDVFYTVSPVPDYVKATLETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARALS
RYGMKKHLRILPMYSGLPYAEQMKVFERAPSSVRKIVVATNIAETSITINGIVFVIDCAF
VKLRAYNPCTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRSNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDQYGHLTDPMGMR
MAEFPLSPMFAKMLLESGNYGCSKEIVTIAAMMQIQNIFSVPPNQKKVAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLVRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILKCIVSGFFANAARIHHSGSYRTLRDDLELHIHPNSVLYGEKPPKWVVFNEVVQTS
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLSSKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctctccaccatgagattctggaagcccggctctgaggctccggggatc
tcggaggaacgggagctcaactcggaaaccacgggctctcccatcatcttcaacccccac
accgccctctccatagagaaacagaggcagaagctccccgttttcaagcacagaaacaac
atcttatatttggttgaaagctaccagactgtaatcatagttggtgagactggatgtggg
aagacaacacaaatacctcagtacctgctggaggctggctgggccgtagaggggaaagtg
attggagtgacgcagcctcgacgtgttgctgccatctcagtggcgaaccgtgttgcagag
gagcgaggggcccttctgggccacgaggtgggctacactatccgatttgatgactgttct
gacccccacgccacgaggattaagttcctaacagatggcatgctggtccgagagatgatg
gctgatcctcttttgaaaaaatacagtgtgttaatgttagatgaagcacacgagagaact
ctgtacaccgatatagccattggtctactaaagaagattcagaagaagcggcgtgacttg
agggtgattgtagcctctgccactcttgacgccaagaaattccatgaattcttcaatctg
aacgagtctggagatctaaacaatgacacgagcgcaattctgacagtagagggacgcacc
tttccagtggacgtcttctacaccgtcagtcctgtcccagattatgtgaaggccacattg
gagacagtcctgaagatccatgagacggaggatgatggggacgtcttggctttcctcact
gggcaggaggaggtggagaaggtggtgtccctgctgcaggagcaggccagagctctttct
cgatatggcatgaagaaacacctgagaattttgcccatgtattctggtctaccttatgct
gagcagatgaaggtgttcgagagagctccctcttctgttcgcaagatcgtggttgccact
aacatagctgaaacctccattaccataaatggaatcgtttttgtcatcgactgtgcgttt
gtgaagctgcgagcctacaatccctgcacggccattgaatctctggtggtcactcccatc
tccaaggcttcggccagccagagggctggcagggctggacgaaaccgtcctgggaaatgc
tttagactatacaccgaggaagactttgagaaactgccagcctctactgttccagagatg
caacgctctaatttggctcctgtcatccttcagctcaaagcgttgggcatagacaacgtg
ctgcggtttagttttctttctcctcctccagctcaaacgatggttcaggctctggaactt
ctttacgcacttggaggtctggaccaatatggccatctgactgatcccatgggcatgcgg
atggctgagtttcctctcagccccatgtttgctaagatgctcctagagtcagggaattat
ggctgctccaaagagattgttaccatagcagcaatgatgcagattcagaatattttttct
gtgccacccaatcagaagaaagttgccgctcgcgagcacaggaaatttgcagtcgctgaa
ggagaccacctcaccatgctgaatgtgtatgaagcatttattaagcatcagaagagctcg
cagtggtgtcaggaacattttctcaactacaagggcctggtgcgcgccgtgactgtgcga
gaacagcttcggcgtctcatgaacaagttcaaagtgccgcggacttccagcgagggtgat
ccagatgtgatcctgaagtgcattgtgtctggattctttgctaatgctgcccgcattcac
cattctggttcctaccggactttacgagatgatctggagctacacattcaccccaactct
gtgctttatggcgagaaacctccaaagtgggttgtcttcaatgaagtggtgcagacgtcc
aaatattacatgcgtgatgtgactgctgttgagtcatcctggctggttgagttggccccc
cacttttacaaacaagcaaagcatggttccctctccagcaagagatccagggtcctgtaa
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