Nematolebias whitei (Rio pearlfish): 119416910
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Entry
119416910 CDS
T08042
Symbol
bgnb
Name
(RefSeq) biglycan b
KO
K08118
biglycan
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119416910 (bgnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nwh00535
]
119416910 (bgnb)
Proteoglycans [BR:
nwh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
119416910 (bgnb)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_14
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
119416910
NCBI-ProteinID:
XP_037540032
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Position
11:complement(28736040..28744557)
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AA seq
372 aa
AA seq
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MSPHCSLLLLLSVTWLVSPSSALPFEQRGFWDFALDSLENGGLMSMMRDEEESSGSAEMP
PPDVPTCPFGCHCQLRIVQCSDLGLTEVPKNLPPDTKFLDLQNNRITELKEHDFRGLTNL
YALSVRNNKISKVHPKTFVPLRHMQKLYFSKNLLTAIPKNLPASLVELRIHENHIKKVAA
GTFSGLGNMNCIEMGANPLQNSGFEPGAFRGLKLNYLRISEAKLTGVPKDLPESLSELHL
DHNQIQAVELEDLSRYKNLFRLGLGNNHIRNIENGSLSYLSMLRELHLDNNRLTRVPQGL
PKMKYLQVVYLHSNNISHVGVDDFCPRGFGMKRTFYNGISLFENPVNYWEVQPATFRCVG
DRFAIQFGNYKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccacactgctcccttctgctgctgctgagtgtgacctggctggtctcgccctcc
tctgccctgccctttgaacaaagaggcttttgggacttcgccctggacagtttggagaat
ggcggcttgatgagtatgatgagggatgaggaagagagttcaggcagcgcggagatgccc
cctccagacgtgcccacgtgtcccttcggctgccactgccagctccggatcgtccagtgc
tctgacctcggtttgacggaggtaccaaagaatcttcctccagacaccaagttcctggac
ctgcagaacaaccgtatcaccgagctgaaggagcatgacttcagaggcctcactaactta
tacgctctgtctgtgaggaataacaagatttccaaagtccatcccaaaacgtttgtccct
ctgaggcacatgcagaagctctacttttcaaagaatctgctgaccgctatacccaaaaac
ttgcctgcatctctggttgagctaaggatccatgagaaccacatcaagaaggtggcagct
ggaaccttctctggactgggcaacatgaactgcatagaaatgggagcaaaccccctccag
aacagtggttttgagccaggagcatttaggggacttaaactgaactatctgcgcatatca
gaagcaaaattaaccggagtcccaaaagatcttccagagagtctcagcgagcttcatttg
gaccacaatcagatccaggctgtggaactggaggacctgagccgctacaaaaacctcttc
agattgggccttggcaacaaccacatccgtaacatagaaaacggcagcctgtcatacctg
tccatgctgagagagctgcacctggacaacaaccgcctcacacgtgttccccagggcctt
ccaaaaatgaaatacctgcaggtggtgtacctccattccaacaacatcagtcacgtgggc
gtggatgacttctgccctcgagggtttgggatgaagaggacgttctataatggcatcagc
ctgtttgaaaaccctgtcaactactgggaggtgcagccggcaacgttccgctgcgtgggc
gaccggtttgccattcagtttggaaactacaaaaaataa
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