Nematolebias whitei (Rio pearlfish): 119416996
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Entry
119416996 CDS
T08042
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119416996 (mkrn4)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119416996 (mkrn4)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119416996 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-RING_2
zf-UDP
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-CCCH_3
zf-RING_5
RING_XB3-XBAT31
IBR_1
Motif
Other DBs
NCBI-GeneID:
119416996
NCBI-ProteinID:
XP_037540125
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All DBs
Position
11:32223523..32230563
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AA seq
353 aa
AA seq
DB search
MDSARSGTICRHFLNGSCRFGSRCFYRHEMTIIQPQICRYFQKGECWYGESCRYLHIQPN
AGAAASGRRGSVPAVSSHMVHPPSDRRGSEPAFLHTVTSRQECSGSEPTVNASRFQCNAR
RLPHDNAKEQSPGERTNPESGQRSGIARASACPRIEEGSTESEPQEGGAAAAAASSNKSE
EKTEAFLQSKDVICGICMETVYEKENAKEHIFGLLPNCNHPFCLKCISTWRKTKHIGSDV
VRACPQCRVKSAFYMPSKVWVEGPAKESAVVAFRKKFSEKRCSSYDRFGYCPFKTDCLYR
HVKNPNRVEFSYFSDDDDDYFDDEYENGVDLLGFLLAMTLLGSDDSDDEDFHF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggactcggctcgcagtgggactatttgtaggcatttcctaaatggctcatgcagattt
ggttccagatgtttttacagacacgagatgaccataatacaaccccaaatatgcagatac
tttcagaaaggtgaatgttggtatggcgagagctgcaggtatctccatattcaacctaat
gctggagcagctgcttcaggtagaaggggttcagtgcctgccgtctcttcccatatggtc
cacccgccctctgacagaagagggtcagaaccagctttcctgcacactgtcacttccagg
caggaatgcagtggatcagagccgactgttaacgcctcacgttttcagtgcaacgctcga
cgcctgccacatgataatgcaaaggagcagtcaccaggggaaagaaccaacccggagtct
ggccagcgttcaggaattgctcgagcaagtgcctgtccgaggatagaggagggttccact
gaatctgagccacaggagggtggagctgctgctgcagcagcttccagtaacaaaagtgaa
gagaaaactgaggccttcctgcagagtaaagatgtgatctgtggaatctgcatggaaaca
gtttatgaaaaggaaaacgcgaaggagcatatatttgggcttttgccaaactgcaaccat
cccttctgtttaaagtgcatctcaacctggcggaagactaaacacattggctctgatgtt
gtaagggcatgcccccagtgcagagtgaagtctgcgttttacatgccaagcaaagtgtgg
gttgaaggaccagcaaaggagagtgcagttgttgcattcaggaagaaattcagtgagaaa
agatgcagcagctatgaccgattcggatactgtcccttcaaaacggactgtctctatcgt
catgtcaaaaatccaaatcgagttgagttttcgtatttctcggacgacgacgatgattat
ttcgatgacgaatatgaaaacggtgttgatctactcggatttctcctagctatgaccctt
cttggtagtgatgattcagacgacgaggactttcacttttaa
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