Nematolebias whitei (Rio pearlfish): 119417044
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Entry
119417044 CDS
T08042
Symbol
cntn3a.2
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119417044 (cntn3a.2)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nwh00537
]
119417044 (cntn3a.2)
Cell adhesion molecules [BR:
nwh04515
]
Immunoglobulin superfamily
Contactins
119417044 (cntn3a.2)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nwh00537
]
Others
119417044 (cntn3a.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
C2-set_2
Ig_C17orf99
Ig_4
C2-set_3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
119417044
NCBI-ProteinID:
XP_037540179
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All DBs
Position
11:complement(34334220..34382095)
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AA seq
1027 aa
AA seq
DB search
MTLPWKLLLLLSIISRLTDCTDSGSYHGPRWRMEPGDLFIPVDSIEEEATLTCDAKGIPP
PQYRWSLNGTLINLGLDRRRRLSGGNLIISNLDRYQDVGMYQCMAYNTVGAILSRRASLL
FAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSGDLTYAWIFNEYPYFVQQDNRRFVSQQ
TGNLYIAKVERSDVGNYTCVVMNSITKGKVHSSPTSLILRTDGVMGEYEPKIEVNFPDNV
PAAKGSTVTLECFALGNPVPEITWRRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYEC
VAENKMGKNTAAGRLAFYAKPQWIQTMKDTALAIEERLYWECRANGKPKPSYTWLKNGQQ
LLSEDRIHVEDGVMSVSVLTLSDAAMYQCVAENKHGVIYFAAELMVLASPPDFTGNVLRA
LLKAKAGTTVTLDCKPKAYPTASILWKKGNLPIHMNDRITLSPDGTLRLANVSKSDAGSY
TCFARNRFGMSSTTGRLLVTDPTRFIQGPVDMEIIVGESVVLPCQVISDPVLDVSFSWAF
NGQLITNGDGHFELVGVQRTAGDLMIRNIQLNHAGKYICVVDTDVESLSAVAVLIVKGPP
SPPDSVTVEEVTDSTAQLAWNPGRDNGSPIAIYLIQTRTLFTVGWQRVNTVPEVIDGNTL
TATVVDLNAWVEYEFRVLAKNSVGIGEPSPVSVKTRTEDAVPDAAPGDVGGGGGSRSELV
ITWEPVPEELQNGESFGYIIAFRAFGEVSWTHVATSAPGASRYVYHNDSIAPFSPFHVKV
GTYNSKGQGPFSPALTIYSAETEPSGMPAGVWARSASASEIEVNWQALSSTPERVLGYEV
VYWEDDTKPETMGKVRVPWNQTSVTVNSLAAHTQYFLTVSAFNTAGTGPFLPAINVTTKK
PPPAQPPQNIDWTLIGSQLSLYWEPVVAMESESDVTGYQLSYWRQRHKEVNTLTTGNSTA
ELTLPENDEDFIIRVQTLSEGGLGPASDPIRIHRLSMSARGSTAWSVDVSPLSFFFTIAI
PTFRSTL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgccatggaaactgcttctgttactatcaatcatcagccgtctgacagattgt
acggacagcggatcttaccatggaccgaggtggaggatggaaccgggggacttgttcatc
cccgtcgactccatcgaggaagaagctaccttgacatgtgacgctaaaggaatacctcct
cctcaatacagatggtcactaaatgggactctaataaatctgggcctggatcggcggcgg
cgtctgtctgggggcaacctcattataagcaatctggatcgctaccaggatgtagggatg
taccagtgtatggcctacaacactgtaggagctatcctgagcaggagagcgagtctactg
tttgcctacttggatcatttcaaagttcacaccagaagcgctgtgtcagtccgcgaggga
caaggagtggtgttactgtgtggcactcctacttcctctggagaccttacgtatgcgtgg
atcttcaacgagtatccatactttgttcagcaagacaatcggcgtttcgtctcccagcag
acgggaaacctttacattgcaaaggtggagcgctcggatgtgggtaactacacttgtgta
gtgatgaacagcatcacgaagggcaaggttcacagctcaccaacgtccctcattctcagg
acggacggagtgatgggtgaatatgagccgaaaatagaagttaatttccctgacaatgta
cctgctgcgaaaggatcaacagttactctggagtgtttcgcccttgggaacccagtccca
gagatcacctggaggagagccaacggagtcccgtttcccagcaaagttaaaatgaagtac
tcaaatgctgttctggagatccccagcttccagcaggacgacacaggagggtacgagtgt
gtggctgagaacaagatgggcaagaacacggctgctggtcgactggctttttatgccaag
cctcagtggatccagaccatgaaggacacagccctggccatagaggagagactctactgg
gaatgccgagcgaatggcaagcccaaaccgtcctacacttggctgaagaacggccagcaa
ctcctctccgaggatcggatccatgtggaagatggagtcatgtcagtgtctgtgctgaca
ctctctgatgccgccatgtaccagtgtgtggctgagaataaacacggtgtcatatacttt
gctgctgaactaatggttttagcttctcctccagacttcacaggcaatgtcctcagagct
ttgctcaaagccaaggcaggaactacagtcactctggactgtaaacccaaagcctatccc
acagcaagcatcttatggaagaaaggaaacctgcctatccacatgaacgacaggatcacg
ctttcccccgatggaactctgagacttgcaaatgtgagcaaatctgatgcaggcagctac
acgtgcttcgctaggaatagatttgggatgtcaagtacaactggaaggctcctggttacg
gacccaaccagatttatccagggtccagtggacatggaaatcattgtaggtgagagcgtt
gtgttgccctgtcaggtcatcagtgaccccgtccttgatgtgtccttttcctgggctttt
aatggacagctgatcaccaatggagacggtcactttgagctggtgggtgtgcagagaaca
gcgggagatcttatgatcaggaacattcagcttaaccatgctggcaaatatatctgcgtg
gtggacacagacgtggagagcctgtcagctgtggctgtattgattgtcaaaggccccccc
agccctccagactcagtgacagtggaggaggtgacagacagcacggcacagctggcctgg
aaccccggcagagacaacggcagccccatcgccatctacctcatccagacaagaactctg
ttcactgtgggctggcagagggttaacacagttccagaggtgatcgatggaaacaccctg
actgccactgtcgtggaccttaacgcctgggtcgagtacgagtttcgagtgttggccaaa
aacagcgttgggattggagaacctagtcccgtgtcagtcaagacgaggacagaagatgca
gttccagatgcagcaccaggtgatgtgggtggaggaggtggaagcagatctgaactggtc
atcacatgggagcctgttcccgaagaactgcagaatggcgagagcttcggttacatcatt
gctttccgtgcatttggagaagttagctggacccacgtggccacctctgcccccggcgca
tctcgctatgtataccacaatgacagcattgcacccttctccccatttcatgtcaaagtt
ggcacttacaacagcaaagggcagggccccttcagccccgcgttgaccatttactccgca
gagactgagccaagcggaatgccggcgggagtttgggccaggagtgcctcagcctccgag
attgaagtgaattggcaggctctctcctccacccctgaacgggtgctgggctatgaggtg
gtttactgggaggatgacaccaagccagagactatggggaaggttagagtgccatggaac
caaacctcggtcacagtgaacagcttggcggcacacacacagtactttttaacagtcagc
gccttcaacacggcgggcacgggccccttccttcctgcgatcaacgtcaccacaaaaaag
ccaccgccagcccagccaccgcagaatattgattggaccctaattggctctcagctgtct
ctgtactgggagccggtggtggcaatggaatcagagtcagacgtcacaggctatcaactt
tcatactggagacagagacacaaagaggtaaacacgttgacaacaggcaattcaacagca
gagctgaccctcccggaaaacgacgaagactttatcattcgagttcagacgttgagcgaa
ggaggactgggtccagcctcggatcccatacgaatccacagactcagtatgagtgctcgt
ggctccacagcctggagtgtggacgtttctccgctctccttcttcttcaccattgcaata
cctacattcaggtcaacgttgtga
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