Nematolebias whitei (Rio pearlfish): 119417079
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Entry
119417079 CDS
T08042
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119417079 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119417079 (chrnb1)
Ion channels [BR:
nwh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
119417079 (chrnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
119417079
NCBI-ProteinID:
XP_037540216
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All DBs
Position
1:38641920..38692490
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AA seq
494 aa
AA seq
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MKSLDKFLFLCCFYSLSTLGGAVDEEHQLMKTLFSGYNLKVRPAHSTEERVVVRVGMILS
SFVGLNMKNEEMSTIVVMNLEWTDYRLTWKPKQHKGIEVLRVPSGKMWLPDIVLINNNDG
VFDVALHVHVQVYSNGRVTWTPPALYCSSCGVKVTYFPFDWQNCSMQFRSYTYDSTEIDL
QYALDSRGKEIREIQLDEAFSESGEWYIRHKPSRKNMNDDMYEEMTFYLIIERKPLYYII
NIIIPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKIPETSLGVPIIVN
YIMFTMILVTFSVILSVVVLNLHHRSSNTHTMPMWVRKIFIHMLPPYLGMLRPKVETPLS
LEVMPRREKKIITISKVADEYFIRKPDLSILFPKPNRFQPEGLCTDLRKFIDGPSSYLTL
PDELKSAIDAITYIAEALQAEKDDGALKEDWQYVAMVVDRMFLWIFVVFTTVGTLAIFAD
ASFNHTPTDPFKGS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtctggacaagttcttgtttttgtgctgcttctacagcctgagcacattagga
ggcgctgtagacgaggagcaccaactgatgaagacgctcttctccggctacaacctgaag
gtccgaccggcccacagcaccgaggagagggtggtcgtccgggtggggatgatcctctcc
tccttcgttggactgaacatgaaaaatgaagaaatgagcacaattgttgtcatgaatctg
gagtggacggattatcgtctgacgtggaagcccaagcagcacaaagggatcgaggtgttg
cgcgtcccctcgggaaagatgtggcttcctgacatcgtcctcattaataataacgatggg
gtttttgacgtggcgctgcacgtccatgtccaggtctatagtaacggcagagtaacgtgg
acgccccctgctctatactgcagttcttgtggagtcaaggtgacatacttcccatttgac
tggcagaactgcagcatgcagttccgctcctacacctacgactcgacagagatcgacctg
cagtacgctctggactcgagaggaaaagaaattcgggagatccagctggatgaggccttc
agtgagagcggagagtggtacatcagacataaaccaagcaggaagaacatgaacgatgac
atgtacgaagaaatgaccttctacctgatcattgagaggaaacctctgtactacatcatc
aacataatcatcccctgcatcctcatcacgatcatcgccatctttaacttctacctgcct
cctgacgctggtgagaagatgggtctgtccatcaacgtactgctcaccctcactgtgttc
ctgctgctgctggctgataaaatcccagagacctcgttgggcgtcccgatcattgtcaac
tacatcatgttcaccatgatcctggtcaccttctctgttatcctgagcgtggtcgtcctc
aacctgcaccaccgctcgtccaatacccacacgatgcccatgtgggtacgcaagatcttc
atccacatgctgccgccgtacctgggcatgctgcggcctaaggtggaaaccccgctgtcc
ctggaggtcatgccccgccgagagaaaaagatcatcaccatcagcaaagtggcagacgag
tacttcatccgaaaacccgacttgtccatcttgttcccgaagcccaacagattccagccc
gagggcctctgcacagatctgaggaagttcatcgacggtccgagctcgtacctcacgctg
cctgacgagctgaagtcggccatcgatgccatcacgtatatcgccgaggcgctgcaggct
gagaaagacgatggagccctgaaggaggactggcagtatgtagccatggtagtggaccgg
atgttcctctggatcttcgtggtcttcaccactgtgggaaccctggccatctttgccgac
gccagtttcaaccacacgcccaccgacccgtttaaagggtcctga
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