Nematolebias whitei (Rio pearlfish): 119417277
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Entry
119417277 CDS
T08042
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2
KO
K06550
L1 cell adhesion molecule
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119417277 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nwh04515
]
119417277 (l1cama)
04090 CD molecules [BR:
nwh04090
]
119417277 (l1cama)
04091 Lectins [BR:
nwh04091
]
119417277 (l1cama)
Cell adhesion molecules [BR:
nwh04515
]
Immunoglobulin superfamily
L1 family
119417277 (l1cama)
CD molecules [BR:
nwh04090
]
Proteins
119417277 (l1cama)
Lectins [BR:
nwh04091
]
I-type lectins (Siglecs)
119417277 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Bravo_FIGEY
C2-set_3
Ig_5
Ig_4
Herpes_gE_N
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
119417277
NCBI-ProteinID:
XP_037540414
LinkDB
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Position
11:complement(31401775..31438799)
Genome browser
AA seq
1260 aa
AA seq
DB search
MADVDSVWFSNIKKVLLIGPFILTPKSYDKKPPEITKQPESATVFSPDDFSLCCEASGNP
PPIFRWLKDGEEFDPGTDPELKVTESLGSFEFSVLSDSMDTLKQYQGKYVCYASNELGTA
VSNEAVLRTDVPPSQQKEKKVTVKAEEGNSIVLKCNPPQSSMEPVIHWMDEHLRHIQLSK
RVVAGKDGNLYFAHLTVDDSRDDYTCHVQYLATRTILAKEAITLKVNPSNSLLRNRRPHM
MTPTGSNSTYHALRGQTIELECIVQGLPAPEITWVKKNGELLESRAKIEKFGRSLRLSNI
TERDSGEYQCIAQNTQGKAIHTYSLTVEAAPYWKKVPESQIYAPGETVKLDCEAKGTPSP
TMSWTINGTPLSATDKDPRRTVMADTSLILREVIFGDTAIYQCLASNKHGTILTNTYVYV
IELPPQILTEDRKLYSVTEGQKVLLDCETFGSPKPKVIWDTEVSSLLAGPRVNPLTNGEL
QILNVTHDDKGLYTCSVQNTNLSISAELEVFNRTVILSPPKDIKVQPGHTAVFTCVAHYD
ASLKVPIIQWRKNNTKLFESSSSQKYTFDGPEFRISDVEPDDEGFYTCEIITSLDKADAS
AMLILYDRPDPPVLLHISDPKHRAVTLRWTPGSNHNSPVLEYVVEFEDQGLIGRDWEELK
RVEGNKERVVLHLWPYISYRFRVIAINEVGKSDPSKPSDIHNTPAEAPANNPEDVRSESV
DPDTLLITWEKMDYRNFNGPDFKYKVQWRRAVGSGPKWHESNTTEHQFLVNGVGNFSAFE
IKVQAVNAFGDGPEPDPVIGYSGEDVPLEAPMDVGVQLINSMTIKVNWFAVDRESVRGHL
LGYKIHVTRKGSRSHHRGRRSRESENVVIEETGPKEVEKVISNLRPYSHYVLTVSVFNKK
GEGPHSEPRVFKTPEGVPGPPTSLILDSPSETEMILHWKPPAHPNGILVGYLLQYQRITE
NDDSPMQEETIDDPAATHLTLTSLDRLSHYRFYLRGRTAAGDGESSMMTGATTLEGAPPD
DISVSVGENLVNVSWEAKKRQRNVGFYIHYLKKNDGNKWKKSEKLNSSQSFYQLQGLSPG
SHYLLHFIYGNTTFWDTDINTAGTEVTEVQRSIATQGWFIGVVSAIGLLLLILLILCFIR
RSKGGKYSVKDKEDGPMDSEVRPMKDETFGEYRSLESDLEEKRTASQQSLGEESKLCSED
TLNFNGSSAMTTELNNDESLVSQISRPSEGFHSMPQNPTLNPTTISSASNGMPTSVNILN
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgttgacagcgtgtggttctccaacatcaagaaagttctcctgataggccct
ttcattctgacaccaaagagttatgacaagaagcctcctgagatcaccaaacagccagag
tctgccactgtcttcagccctgacgacttctccttgtgctgtgaagcgtctggcaaccct
ccgcccatttttcgatggttgaaggacggggaggagtttgacccaggcactgacccggag
ctaaaggttacggagagcttaggctcattcgaattctccgtgcttagcgacagtatggac
accctaaagcagtaccaaggcaaatatgtctgctatgcatccaacgagctggggacagct
gtgtctaatgaggccgtgctcaggactgacgttcccccgtcccagcagaaagaaaaaaaa
gtcactgtgaaagctgaggagggaaacagtattgttctgaagtgtaaccccccacagagc
tccatggagcccgtcattcactggatggatgagcacctacgccatatccagctcagcaaa
cgggtggtggcagggaaggatggcaacctgtacttcgctcatctgacagtcgatgacagc
agagatgactacacatgccacgtccagtatctggcgacacgaacaatcctggccaaagaa
gccatcaccctgaaggtcaacccctccaattcgttactgcggaaccggagaccgcacatg
atgacgcctactggaagcaacagcacgtaccacgccctccggggccagaccatagagctt
gagtgcatcgtccagggcctaccagcacctgaaattacatgggtaaagaagaatggcgag
ctgttggagtcccgtgccaagatagaaaagtttggccgaagcctgcgcctcagtaatatc
acagaacgtgacagtggcgagtaccagtgcatagctcagaacacccaggggaaggccata
cacacatacagtttgactgtggaagctgctccttattggaaaaaggtgccagagagtcag
atttatgcaccaggcgagacagtcaagctcgactgtgaggcgaagggtaccccctctccc
actatgagctggaccatcaacgggacacccctgtcagcaactgataaggaccccagacga
accgtgatggcagacacatcactgatcctcagggaggtcatctttggagacactgccatc
taccagtgcctggcctccaacaaacacggaaccatcctcaccaacacctatgtttacgtc
atcgagctgcctcctcagatcctaactgaagacaggaaactgtattcagttaccgaaggc
cagaaggttttactagactgtgagacctttggctctccaaaacctaaagtcatatgggac
accgaggtatcgtctcttcttgcaggtccaagggtaaacccactcacaaacggggagctt
cagatattaaatgtcacccacgacgataagggtctctacacctgctctgtacaaaacacc
aacttgtcaatcagtgctgagttggaggtgttcaacagaacagtgatcttgtcaccaccc
aaggatataaaggtgcagcctggacacacagcagtctttacatgtgtggcccattatgac
gccagtctcaaagttcccatcattcagtggaggaagaacaatacaaagctgtttgaatcc
tccagcagtcaaaaatacacatttgatgggccagaattcagaatatctgatgtggaacca
gacgatgaaggcttctacacctgtgagatcatcacatcactggacaaggctgatgccagt
gccatgctcattttatatgaccgaccagatcctccagtcctcctccatatctctgatcct
aagcatcgagctgtcactctcagatggactccaggatccaaccacaacagccctgtgcta
gagtacgttgttgagtttgaggaccagggtttgatagggagggattgggaagagctaaag
cgagtagaagggaacaaggagcgtgttgtcctccacctgtggccttacatatcctaccgt
ttccgggtcattgccataaacgaagtgggaaagagtgaccccagcaaaccatctgatatc
cacaacacacctgctgaagctccagccaacaacccggaggatgtcaggagtgagtctgta
gacccagatactctgctcatcacctgggagaaaatggactacaggaactttaacggacca
gatttcaagtacaaggtgcagtggaggagagcggtgggcagtgggcctaagtggcatgag
agcaacacaacagagcaccaatttcttgtcaacggcgttggcaatttctccgcctttgaa
attaaagttcaggctgttaatgcatttggggacggacctgagccagacccggttattggc
tactcaggagaagatgttccacttgaggcaccaatggatgtgggtgttcaactgataaac
agcatgacaatcaaagtaaactggtttgccgtggacagagagtcagtcagaggacacttg
ctgggatacaagatacatgtaaccagaaaaggctccaggagccaccaccgaggccgacgg
tccagggagtccgagaacgttgtgatagaagaaactgggcccaaagaagtggagaaggtc
atcagtaatcttagaccgtactcccactatgttctgactgtcagtgtgtttaacaaaaaa
ggagaaggaccccattctgagcctcgggtcttcaagactccagagggagtacctggtcct
cccacatctctgatcctggacagcccctcagagacagaaatgatcctgcactggaaacct
cctgctcaccccaatggcatccttgttggatacctacttcagtaccagcggattacagag
aatgacgacagccccatgcaggaagagacaatcgatgaccccgcagccactcacctcacc
ctaacgagcctggaccgtctcagccattaccgcttttatctgagggggcgcacagctgcc
ggggatggagagtccagtatgatgacgggggccaccacactggaaggagcaccccctgac
gacatcagtgtatctgtaggggagaacttggtaaatgtcagctgggaagccaagaagaga
caaaggaatgttggtttctacatccactacctgaaaaagaacgatggcaacaaatggaag
aagtctgagaaactgaactcctctcagtccttctaccaacttcagggtttgagtcctggc
tctcactatctcctacacttcatctacggcaacaccacattctgggatactgacataaac
acagcaggaacagaagtgacagaggtgcagcgaagcattgcaacgcagggctggttcatc
ggagttgtgagtgccatcggacttctgttgttgattctgctcatcctatgcttcatcagg
aggagtaaaggaggaaagtactcagtgaaagataaagaagacggtccaatggactcagaa
gtgcgaccgatgaaggatgaaacttttggagagtacagatctctagaaagtgatcttgag
gagaagcggacagcgagccagcagtctttgggtgaggagagcaagctctgcagcgaggac
accctgaactttaatggcagcagtgccatgaccacagagctcaacaatgatgaatctctg
gtcagccagatcagccgtccaagtgaggggttccatagcatgcctcaaaaccccacgcta
aaccccaccactatctcctcagcctccaacggcatgcccacttcagttaatatcctcaat
taa
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integrated database retrieval system
