Nematolebias whitei (Rio pearlfish): 119417304
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Entry
119417304 CDS
T08042
Symbol
si:dkey-11f4.7
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119417304 (si:dkey-11f4.7)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119417304 (si:dkey-11f4.7)
Membrane trafficking [BR:
nwh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
119417304 (si:dkey-11f4.7)
Ion channels [BR:
nwh04040
]
Other channels
Mechanosensitive channel (Piezo)
119417304 (si:dkey-11f4.7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
119417304
NCBI-ProteinID:
XP_037540440
LinkDB
All DBs
Position
11:complement(36943206..36997546)
Genome browser
AA seq
2670 aa
AA seq
DB search
MAGDLVVGVLYNLLVPLLLLTASSFRYNGLSVVYFVFLLTLPLLPNPSPVTLKGKTGQFL
RLIVYTSLIFLTLQCFMQIPFAYISPHVSGFWEDFLYHFGIVRFSSVDAGNIVRLLAPDV
GLSFSVLFILRLCKKRLRPVPQVSLHENGIPPSIPEDVETSDSESEDGSVPEGSSFDSSE
ETTVPVQSSPPQFVQKLIMFAAGLRLLLLAIMNTAGKVVVTLLLGLAGITLPSLTSGVYF
GVFLSLVWWWIFSRSISMLVFSSLCVMMAIFSAGHLLALYVYQLPLSQQLIPPDDIYARL
FGMTGVIRTSSSHPHRLGLHPHVCWPDFINPLVLLLLYYTLVTLLHRWVHVMEESCCSSQ
DVAVVDESESPLESPEAPPSFSRVIYISGDKQELLSSTDDETYLPDEPMILISGSSWQNV
HSSSVGCLLEGAGYTNCYAPSHKEDRAPPSHEIDGKTDDENEEVSKSLTETTPSPSGPSG
LVIFGRLLQKHSYVSALVIMMVWSITYNNWLTFVLLVWSCIIWMMRDRRRYAMMSAPFLA
IYGTVLVVLGFLSGLRLSRAELYPGLPPAVIVDFDLNSYHPAPCIHLGAKVFYSFNFWLM
FRQQLKERQEKQSMKNKSLEEIQDMPQEENEPSPLVVMLISGVKGILVKYWILFCCSMFF
IVSFSGKVVVYKILYIVLFLLCVVLYQVGKFDDLHIYGKFVEFVFLVFTSREEELKCSVN
LIADIIKENIAKLQQRLVKEQVGHGKSQETLDSIEQQTSSLKGAEEQEEATDETIPCSRE
EKWGLIVDRTSLLLVQAVSGLRRLQELSWRLMELHSLKIVSSGIIWVSLQEVSLMNFLFL
VLWVFALPFPRLRPLASSVSAVWACVMVVCKMFYQLKVIKPLDYSSNCTADFLPSNSSGL
DDGAELMGNMVELLRRSVLYIEPVDPVYWCGALRKCEGRILPCLRNHLMVLGLLVFEATV
HRHQLYFRLRNDLKPPPFSIIFHGITRQHLDHGVLPCIKYFINFGFYRFGLEMSLIVAVN
VIGQRMDFYALFHSCALMAVLFRRRRKAIGEVWPKYCCFTAGLMVFQYLLCIGIPPALCV
DYPWRTAVHPLTSNVIKWFYLPDFAMRPNPLFIFYDHLLLLCSALQWQVFVEENRAAVRL
LAGDNVEISRSLDPCSFNQFIPVHNFLHCRSYLDMVKVFVFSYFFWLVLCLIFITGTTRI
NIFCLGYLVACFYFMLFGGSVLMQPVRYILRLWDWLIGYTCFVITMKNLLSLGSCGFLDS
LLKNSCWLIQAFSMFCTIKGYDVPEPVDECELPEGEAGIVWDAICFTVLLAQRRVFLSYY
FLYVVSDLKSSKILASRGAELFEAKVKKQIAARLEMEKKSVETLKRQMEKIKSKQRSPQT
ASDEAELPADQAALDDEKAKRDAGKWWKPWVSQPGVENNCGYHLFESDSEEDEEEVTEKK
EEEERPKKKSAFQLAYNAWVTSSKNALKDLKKEKKIFKKEEKRRAKRELQKQQGIERTDS
SEEELDESAVEEEGEEEKENILQRIINTIKFSWVFLQSLLDDLTDGLNSFCKDSLDISKV
LRFERALLNQQQKKGKEVSQESVKQFYESWISRQNTLSSQEGLDALPPPLTPHEAPSSRH
AYGRLKSQASKMSLGSSFSSCMTDETMLVSRQPTQEELDYSPDDSPAACQLRRRLLKEAH
IDLTSFETDDVPQSCKDVASQKEDHEQEDVEQEEDIEQEEDVEQEEDVEQEEDVEQEEDV
EQEEDVEQEEDLDEELKQKEGVGKSKYIYASLDHQESDEEDGVILPGSPRPLSQETRNLT
ASELLLNNMFVNDEVSDSDKFYTTLPRPLKLLFALYNMMVSKSEMLCYFVIILNHIVSAS
FLSLILPVLIFLWAMLSVPRPTKRFWMTAIIYTELTVVVKYFFQFGFFPWTTSAYRGINA
ERPFALPNIIGVEKKDGYVLFDLIQLLALFFHRSILKCHGLWDNKEVEMPDFFKKLKKKV
DKKKMTGADKTGGKEKPSRRLKFLPFQASTTSLFCRQKRNESEDSEEVKLKKQPSKKKRR
QRHMTPLTRKQRIRQQIRERMLQIKATVIEVALRIYLPIRQFFYDIIHPDYSPVCDVYAL
MFLVDVVNFIVTIYGYWAFGKYSAAADISESLSEDQVPEAFLVMLLMQFGTMIVDRALYL
QKSLLGKCVFQVVLVFGIHFWMFFILPGVTERRFNRNPVAQLWYFVKCIYFGLSAYQIKC
GYPNRILGNFLTKNYNYLNLFLFQGFRMVPFLTELRAVMDWVWTDTTLSLSSWICVEDIY
ANIFVLKCWRESEKKYPHPPGQRKKKVVKYGMGGFIIFALISIIWFPLLFMSLVQSAVGV
TNQPVEVSIQLSIAGYEPLFTMSAQEQNLVAYTEAGFSRLTKIYATHPSAMQFLMNYEAE
DIVVAKIKSDASLLWGISPASRAAMIQELSSSSHIYITLRWTLVRNASISMVVESVGEHT
VKFDDKVLMDGIVQMLKGNHSKSVIIHSLLPKFIRGPKGQESKMATRMSVEPSERPELQA
LAFFRPMSIRLEQVNGTSDKQVDQWWVVEECSSVLTSSEHKCHSIEIGVFNDKVSPSSLG
FLAGHGIVGLYMSVVLVIGKFVREFFNGISRSIMFEDLPCVDRVLKLCTDIFVVRETGEM
ELEETLFEKLIFLYRSPETMIKMTREKKDS
NT seq
8013 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggatcttgtagttggagtactctacaacttattggtgccactgcttctcctg
actgcttcttcgttccgctacaacggcctgtctgtggtgtactttgtgttcttgctcacg
ctgccgttgctgccgaacccaagcccggtcaccctgaaaggtaaaactggtcagttcctg
cggctgatcgtctacacgagcctgatctttctgaccctgcagtgtttcatgcagatcccc
ttcgcttacatctccccacacgttagtggcttctgggaagattttctctaccattttgga
attgtaaggttcagctcggttgatgctggaaacattgtgcgtctcttggccccagacgtt
ggcctttccttttccgttttgttcatactgaggctgtgcaaaaaacgtctgcgccccgtg
cctcaagtcagcctccatgaaaatggaatcccaccctccatccccgaggatgtagaaacg
tccgattcagaatcagaggacggaagtgtcccagagggctcgtcttttgacagctcagag
gagactacagtcccggttcagtcgagcccaccacagtttgtccagaaactgatcatgttt
gcagccggactgaggctgctgctgttggcaatcatgaacacagcggggaaggtggtggtg
acccttctgctggggctggcaggtatcacactgccctctctcacctccggagtgtatttt
ggcgtgtttcttagtctggtgtggtggtggatattcagccgctccatcagcatgctggtt
ttcagctccttgtgtgtgatgatggccatcttcagcgcaggacatctgctggctctgtat
gtgtatcagctgcctctgtcccagcagctcataccaccagatgacatctacgccaggttg
ttcggcatgacaggggtaatcagaaccagctcttcacacccacaccgtctgggcctgcac
ccgcatgtgtgctggccggacttcatcaaccctttggttcttctgctgctctactacaca
ctggtgactctgctgcacagatgggtccacgtcatggaggagagttgttgttcttctcag
gatgttgctgtcgttgatgagtctgagagcccgttagaaagtccagaagctccaccaagc
ttctccagggtcatctacatctcaggagacaaacaagagcttttaagcagcacagatgac
gagacctatctgccagatgagccaatgattctgataagtggaagttcctggcaaaacgtc
cacagcagcagtgttgggtgtctgcttgaaggggcaggttacacaaactgttacgctcca
tcacataaagaagaccgagccccaccttcacacgaaatcgacgggaaaacggatgacgag
aatgaggaagtctcaaagagcctgacagaaaccacaccttcgccctcaggcccgagtggt
ctggtcatctttggacgactgttgcagaaacacagctatgtcagtgctctcgtcataatg
atggtgtggagcatcacttacaacaactggctgacttttgtcttgcttgtgtggtcctgc
atcatttggatgatgcgggaccgtcggcggtacgccatgatgtccgcccctttccttgcc
atctatggcactgtcctggtggttctgggcttcctgagtgggctccgtctgagtcgggcc
gagctgtaccccggcctgcccccggctgtgatcgtggacttcgacttgaatagctaccac
cctgcgccctgcatccacctgggagcaaaggtcttctacagctttaacttctggttgatg
tttcgtcagcagctgaaggagaggcaagagaagcagagcatgaaaaataaatcccttgaa
gaaatccaagacatgccacaggaggaaaatgagccttctcctctggtagtcatgctgatc
tcaggtgtaaaagggattttggtaaaatactggatcctcttctgctgctccatgttcttc
atagtcagcttctctgggaaggtggtggtctacaaaatcctctacatcgttcttttcctc
ctgtgtgttgttctgtaccaggttggtaaatttgacgacttacatatatatggtaaattt
gttgaatttgtctttcttgtatttacttccagagaagaagaactgaagtgttcagtaaat
ctgatagcggacatcattaaagaaaatattgcaaagttacaacaaaggcttgtgaaggag
caggtgggacatggcaaaagtcaggagactctggacagcattgaacaacaaacctcctcc
ctgaaaggagctgaggagcaggaggaggcaactgatgaaacgatcccatgcagtcgtgag
gaaaagtggggcctgattgtggaccggacgagcctgctcctggttcaggccgtctctgga
ctccgcaggctgcaggagctcagctggagactgatggagctccacagcctcaaaattgtg
tcatctggcatcatctgggtgtcgctgcaagaggtttcactgatgaacttcctttttctg
gttctgtgggtgtttgcgcttccgttcccacggttacgacctctggcctccagcgtctct
gctgtgtgggcctgcgtcatggtggtgtgcaagatgttttaccagctcaaagtcatcaaa
cctctcgattactcgtccaactgcactgctgactttctgccgtccaacagctcagggctg
gacgatggagcagaactgatggggaacatggtggagctgctccggaggtctgttctctac
atcgaacctgttgaccctgtctactggtgcggagcgctgagaaagtgcgagggcagaatc
ctcccctgcctcaggaaccatctgatggtgctcgggttgcttgtcttcgaggcgactgtt
caccgccaccagctctacttccgtctccgtaacgacctgaagcctccacccttcagcatc
atcttccacggcatcacgaggcagcacctcgatcacggcgtcctgccctgcatcaaatac
ttcatcaactttggcttctacagatttggacttgagatgagtttaatcgtggcagtgaat
gtaatcggtcagaggatggatttctacgcgttgttccactcctgtgcgttgatggctgtc
ctgtttcggcgacgtaggaaagccatcggggaggtttggcccaaatattgctgtttcaca
gctggactgatggtgtttcagtacctgctctgcatcggcatccctcctgctctctgtgtt
gattatccctggagaacagcagttcatcctttaacgtcaaatgttattaagtggttttac
cttcccgactttgccatgagacccaacccattgttcatcttctacgaccacctcctgctg
ctctgctcggctctgcagtggcaggtttttgtggaggagaaccgagcagcggtgcgactg
ctggccggagacaacgtggagatcagccgcagtttggatccttgttccttcaaccagttc
atacctgttcacaactttcttcactgcaggagctacctggacatggtgaaggtgtttgtt
ttcagctacttcttctggctggtgctctgcctcatcttcatcaccggcaccacgcgaatc
aacatcttctgcctcggatacctggtcgcctgtttttactttatgctgtttggtggcagc
gtgctgatgcagccggtcaggtacatacttcgcctgtgggactggctcatcggctacacc
tgctttgtgatcaccatgaagaacttgctgtctcttggttcctgtggtttcctggacagc
ctgttgaagaacagctgctggttgattcaggccttcagcatgttctgcaccatcaaaggc
tacgatgttccggagcctgttgacgagtgtgagctgccagagggtgaagccggcatcgtc
tgggatgcgatctgcttcaccgtcctcctggcacagaggagggtcttcctgagctactac
ttcctctacgtggtgtctgacctcaaatcctcaaagattttagcctcaaggggggctgag
ctgtttgaggccaaagtgaagaagcagatagcagccagactggagatggagaagaaatct
gtcgagacgctgaagagacagatggagaagataaaatctaaacagaggagtcctcagacg
gcttcagacgaagcagaacttcctgcagatcaggcagcactggatgacgaaaaggcaaag
agagatgcggggaagtggtggaagccttgggtctctcagcctggagtggaaaacaactgt
ggctaccacttgtttgagagtgacagtgaagaggatgaagaggaagttaccgagaagaaa
gaggaagaagaacgaccaaagaagaaatcagctttccagttggcctacaacgcctgggtc
accagctcaaaaaatgctctgaaggacctgaagaaagagaagaagatttttaagaaggag
gaaaagaggcgggcaaagagagagctgcagaagcagcagggcattgaaagaacagactca
agtgaggaagaactggatgaaagtgctgtggaggaagagggagaggaggaaaaagaaaac
atcttgcagcgcatcattaacacgatcaaattcagctgggtgtttcttcagtctcttctt
gatgacctgacggatggtctgaactccttctgcaaagacagcctggacatttccaaagtg
ctgcgctttgagcgagcgttactcaaccagcagcaaaaaaagggcaaagaggtgagtcag
gagagcgtgaagcagttttatgagagctggatctcccgtcagaacacgctgtcatctcag
gaaggtttggatgccctgcctccccccctcaccccacatgaagccccctcctcacgtcac
gcctacggcaggctgaagagccaagcctccaaaatgtccttgggcagcagcttttccagc
tgcatgacggatgagacgatgctggtctccaggcagccgacgcaggaagagctggactat
tcgcccgatgactcgcctgctgcttgccagcttcgccgaagactcctgaaagaagcacac
atcgacctgacgtcctttgagactgacgatgttccacagagttgtaaagatgtggcctct
caaaaagaagaccatgaacaggaggacgttgaacaagaggaggacattgaacaagaggag
gacgttgaacaggaggaggacgttgaacaggaggaggacgttgaacaggaggaggacgtt
gaacaggaggaggatgttgaacaggaggaggacctagatgaagaattaaagcaaaaggaa
ggagttggaaagtccaaatacatatacgcctccctggatcaccaggagagtgatgaagag
gatggtgtgatcctcccaggctctcccagacctctgagtcaggaaacaaggaacctcaca
gctagtgagctgctgctcaacaacatgtttgtgaacgatgaggtctcagactccgataag
ttttacaccaccttgccgaggcccctgaagctgctctttgccctctacaacatgatggtg
tccaagtctgagatgctgtgttactttgtcatcatcctgaaccacattgtgtccgcttcc
tttctctccctcatcctccccgtcctgattttcctctgggccatgctgtctgtgccccgg
cccaccaaacgcttctggatgaccgctataatctacactgagctgaccgttgtagtgaag
tactttttccagtttggtttcttcccatggaccacttctgcttaccgaggcataaacgct
gagcggccctttgccctgcccaacatcataggggtggagaagaaagacggctacgtcctc
ttcgatctcattcagctgctggccctgttcttccaccgatccatcctgaagtgccatggg
ttgtgggacaacaaagaagtcgagatgcctgatttcttcaagaagttgaagaaaaaagtg
gacaagaagaagatgacaggggctgataagacaggagggaaagaaaaaccttcacgccgg
ctgaagttcctccctttccaggcctccaccacctccctgttctgcagacagaaacggaac
gaatctgaagactctgaggaggtgaagctgaagaagcagccgagcaagaaaaagagacgg
cagcggcacatgactccactgacgaggaagcagaggatcagacagcagatcagagagagg
atgctgcaaatcaaagctaccgtcatagaagtagctcttcgcatctatctgcccataaga
cagttcttttatgacatcatccacccagattacagtcccgtgtgcgacgtctacgccctc
atgtttcttgttgatgtcgtcaacttcatcgttaccatatatggatattgggcattcggg
aaatactctgcagcagcggacatctcagagtctctgtcagaagaccaggtcccagaagcc
tttttggtgatgctgctcatgcagtttggcaccatgatcgttgaccgtgctctgtatctg
cagaagtccctgctaggaaagtgtgttttccaggttgtgctggtgtttggcatacacttc
tggatgttcttcatcctccccggagttacagagaggaggttcaacaggaacccagtggcc
cagctgtggtactttgtaaagtgtatctacttcggcctctctgcctaccagatcaaatgt
ggctaccccaaccgcatcttgggcaacttcctcaccaaaaactacaactacctgaacctc
ttcctcttccagggctttcggatggttcccttcctgacagagctgcgggccgtgatggac
tgggtttggactgacaccacgctgtctctctccagctggatttgtgttgaagatatttat
gccaacatttttgtcctcaagtgctggagagagtccgaaaagaaatacccccaccctccg
gggcagaggaagaagaaggtggtgaaatatggaatgggagggttcatcatcttcgctctg
atcagcatcatctggttccctcttctcttcatgtcgctggtccagtcagcggttggagtg
accaatcagccggtggaggtctccatccagctcagcatcgctggatatgagcctctcttc
acaatgagcgcacaggagcagaacttggttgcgtacacagaagcaggattcagccgactc
accaaaatttatgctacgcatccatctgccatgcagtttctgatgaactacgaggctgag
gacattgttgtagctaaaatcaagagcgatgccagcctgctgtggggcatcagcccagcc
agtcgcgccgccatgatccaagaactcagcagctcttcccacatttacataaccttacgc
tggactctggtcaggaacgcatcaatatcgatggttgtggagtcggtgggtgaacacacg
gtgaagtttgacgacaaggtcttgatggatggaattgtacaaatgctcaaaggaaaccac
agcaaatctgtgataattcattctctgctgccaaagtttattagaggtcccaagggacaa
gagtctaaaatggccaccaggatgtccgtcgagccgtcagagcgtccagaactccaggcg
ctggccttctttaggcccatgtccattagacttgagcaggtcaacgggacatcggacaaa
caggtggaccagtggtgggtggtggaggagtgctcctctgtcctcacctcctctgaacac
aagtgtcacagcattgagatcggggtgttcaacgataaagtcagcccctccagtctgggc
tttctggctggacatggaattgttggcctgtacatgtcggtggttctggtcattggaaag
tttgttagagaattcttcaatgggatatctcggtccatcatgtttgaggatctgccgtgt
gtggaccgagtcctgaagctctgcactgacatttttgtggtgcgggagacaggagagatg
gagctggaggagactctgtttgagaaactcatcttcctttaccgatcgccggagaccatg
atcaaaatgaccagagagaagaaagacagctag
DBGET
integrated database retrieval system
